Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 1.3e-58 229.6 116 100.0
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.7e-39 166.0 90 90.0
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.0e-36 156.8 98 77.6
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 3.9e-36 154.8 89 83.1
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 5.1e-36 154.5 90 82.2
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 2.0e-35 152.5 98 75.5
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 5.7e-35 151.0 90 81.1
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 7.4e-35 150.6 92 73.9
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 9.7e-35 150.2 90 80.0
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 3.7e-34 148.3 89 79.8
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 3.7e-34 148.3 90 78.9
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 6.3e-34 147.5 87 79.3
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 6.3e-34 147.5 90 80.0
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 8.2e-34 147.1 90 80.0
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 8.2e-34 147.1 90 74.4
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 8.2e-34 147.1 90 74.4
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 8.2e-34 147.1 89 77.5
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.1e-33 146.7 90 78.9
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.1e-33 146.7 90 76.7
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 1.4e-33 146.4 115 63.5
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.8e-33 146.0 90 77.8
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.8e-33 146.0 97 73.2
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.4e-33 145.6 90 76.7
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 2.4e-33 145.6 85 80.0
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 3.1e-33 145.2 90 78.9
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 3.1e-33 145.2 90 77.8
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 3.1e-33 145.2 90 77.8
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 3.1e-33 145.2 90 77.8
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 7.0e-33 144.1 92 71.7
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 7.0e-33 144.1 90 74.4
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 9.1e-33 143.7 86 77.9
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 9.1e-33 143.7 92 73.9
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.2e-32 143.3 87 75.9
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 1.2e-32 143.3 98 72.4
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.5e-32 142.9 90 76.7
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.5e-32 142.9 97 74.2
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 2.6e-32 142.1 90 71.1
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 2.6e-32 142.1 87 75.9
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 3.5e-32 141.7 89 77.5
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 3.5e-32 141.7 90 75.6
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 4.5e-32 141.4 92 72.8
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 4.5e-32 141.4 92 72.8
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 4.5e-32 141.4 91 75.8
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 5.9e-32 141.0 90 73.3
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 5.9e-32 141.0 90 74.4
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 5.9e-32 141.0 90 74.4
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 5.9e-32 141.0 90 74.4
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 5.9e-32 141.0 92 75.0
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 7.7e-32 140.6 88 73.9
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.0e-31 140.2 90 74.4
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 1.0e-31 140.2 86 76.7
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.3e-31 139.8 89 77.5
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.3e-31 139.8 89 77.5
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.3e-31 139.8 89 77.5
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.3e-31 139.8 89 77.5
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.3e-31 139.8 89 77.5
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 1.3e-31 139.8 86 75.6
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.7e-31 139.4 86 75.6
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.2e-31 139.0 90 73.3
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 2.2e-31 139.0 90 73.3
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.9e-31 138.7 92 73.9
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 3.8e-31 138.3 85 75.3
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 3.8e-31 138.3 85 75.3
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 5.0e-31 137.9 90 73.3
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 5.0e-31 137.9 87 74.7
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 5.0e-31 137.9 90 71.1
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 6.5e-31 137.5 89 73.0
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.1e-30 136.7 90 72.2
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 1.5e-30 136.3 90 68.9
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 2.5e-30 135.6 89 71.9
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 2.5e-30 135.6 89 71.9
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 2.5e-30 135.6 90 66.7
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 2.5e-30 135.6 95 73.7
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.2e-30 135.2 90 73.3
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 5.5e-30 134.4 116 62.9
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 5.5e-30 134.4 85 72.9
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 3.6e-29 131.7 73 80.8
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 6.1e-29 131.0 87 70.1
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.4e-28 129.8 102 65.7
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 2.3e-28 129.0 103 65.0
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-27 126.7 88 71.6
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.5e-27 126.3 65 86.2
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.6e-27 125.6 65 84.6
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 2.6e-27 125.6 90 71.1
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 2.6e-27 125.6 102 62.7
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 4.4e-27 124.8 85 69.4
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 4.4e-27 124.8 83 71.1
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 4.8e-26 121.3 71 74.6
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 6.3e-26 120.9 82 67.1
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 8.2e-26 120.6 90 61.1
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.4e-25 119.0 84 71.4
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 7.0e-25 117.5 83 71.1
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 3.5e-24 115.2 63 81.0
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 1.9e-22 109.4 87 59.8
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.7e-18 96.3 96 57.3
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 2.8e-18 95.5 84 59.5
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 2.9e-15 85.5 46 78.3
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 6.8e-12 74.3 46 69.6
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 8.8e-12 73.9 80 46.2
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 2.0e-11 72.8 98 41.8
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 1.2e-08 63.5 82 36.6


User provided reference genes

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