Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0084600 Salix brachista HOM05D000726 ORTHO05D007554 2.3e-197 692.2 394 100.0
Sabra11G0026400 Salix brachista HOM05D000726 ORTHO05D007554 2.7e-177 625.5 328 100.0
Sabra11G0056500 Salix brachista HOM05D000726 ORTHO05D007554 8.6e-176 620.5 328 99.7
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 1.1e-170 603.6 343 94.2
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 3.4e-148 528.9 345 83.8
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 9.1e-117 424.5 353 66.9
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 5.9e-108 395.2 358 62.3
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 6.5e-107 391.7 351 62.4
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.4e-106 390.6 351 63.0
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 4.7e-105 385.6 358 60.6
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 6.1e-105 385.2 342 60.5
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 6.1e-105 385.2 351 61.3
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 4.8e-102 375.6 350 61.4
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 3.1e-101 372.9 348 59.5
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 3.1e-101 372.9 351 62.4
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 4.1e-101 372.5 346 59.0
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 5.3e-101 372.1 358 60.6
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 5.3e-101 372.1 351 60.4
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 7.0e-101 371.7 352 59.1
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 1.6e-100 370.5 362 57.5
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 2.0e-100 370.2 354 60.2
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 2.0e-100 370.2 348 57.5
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 5.9e-100 368.6 350 59.1
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 1.0e-99 367.9 348 57.2
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 2.9e-99 366.3 362 59.9
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 2.9e-99 366.3 352 58.5
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 3.8e-99 365.9 351 61.5
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 3.8e-99 365.9 362 59.1
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 5.0e-99 365.5 366 57.1
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 5.0e-99 365.5 358 59.2
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 5.0e-99 365.5 359 58.5
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 1.5e-98 364.0 351 59.8
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 1.5e-98 364.0 351 57.5
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 1.9e-98 363.6 345 59.4
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 1.9e-98 363.6 359 57.7
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 2.5e-98 363.2 338 58.6
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 4.2e-98 362.5 350 60.9
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 7.2e-98 361.7 362 59.4
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 9.4e-98 361.3 352 56.5
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 1.2e-97 360.9 366 57.1
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 1.6e-97 360.5 356 58.7
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 1.6e-97 360.5 363 58.1
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 2.1e-97 360.1 354 59.6
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 2.7e-97 359.8 367 57.2
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 6.1e-97 358.6 357 58.3
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 1.0e-96 357.8 363 57.9
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 1.0e-96 357.8 366 55.7
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.0e-96 357.8 350 57.7
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 1.0e-96 357.8 348 59.8
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 1.8e-96 357.1 357 56.0
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 1.8e-96 357.1 360 57.8
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 3.0e-96 356.3 350 56.6
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 5.2e-96 355.5 351 59.3
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 6.7e-96 355.1 350 54.6
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 6.7e-96 355.1 351 58.1
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 8.8e-96 354.8 343 57.4
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 8.8e-96 354.8 348 58.9
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 8.8e-96 354.8 349 56.4
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 8.8e-96 354.8 369 56.6
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 8.8e-96 354.8 351 56.7
CiPaw.01G005400 Carya illinoinensis HOM05D000726 ORTHO05D007554 4.4e-95 352.4 362 56.4
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 9.7e-95 351.3 353 57.2
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.3e-94 350.9 353 58.4
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 1.7e-94 350.5 348 56.3
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 1.7e-94 350.5 361 57.6
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 3.7e-94 349.4 304 59.5
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.1e-93 347.8 351 56.7
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 1.1e-93 347.8 349 58.5
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.4e-93 347.4 346 58.7
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 7.0e-93 345.1 354 55.9
Oeu003558.1 Olea europaea HOM05D000726 ORTHO05D007554 7.0e-93 345.1 344 57.6
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 9.1e-93 344.7 355 55.5
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 1.2e-92 344.4 345 58.6
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 2.0e-92 343.6 341 59.2
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 2.7e-92 343.2 360 55.6
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 3.5e-92 342.8 349 59.0
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 7.7e-92 341.7 367 54.0
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 1.0e-91 341.3 354 56.5
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 2.9e-91 339.7 372 53.2
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 8.5e-91 338.2 304 58.9
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 2.5e-90 336.7 365 53.7
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 1.2e-89 334.3 352 55.4
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 1.6e-89 334.0 351 55.8
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 6.1e-89 332.0 363 53.7
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 8.0e-89 331.6 351 55.6
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 3.0e-88 329.7 347 55.9
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 3.7e-86 322.8 342 53.8
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 1.1e-85 321.2 225 72.4
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.4e-85 320.1 316 55.4
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 6.5e-83 312.0 350 52.9
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 8.6e-83 311.6 343 52.5
HPP92_014039 Vanilla planifolia HOM05D000726 ORTHO05D007554 3.0e-80 303.1 361 48.5
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 5.2e-80 302.4 348 52.0
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 8.9e-80 301.6 349 51.9
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 2.6e-79 300.1 391 45.8
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 4.4e-79 299.3 292 55.8
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 4.4e-79 299.3 292 55.8
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 1.7e-78 297.4 363 47.9
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.4e-69 267.7 344 47.7
SMO364G0657 Selaginella moellendorffii HOM05D000726 ORTHO05D007554 6.6e-67 258.8 282 51.1
Mapoly0045s0033 Marchantia polymorpha HOM05D000726 ORTHO05D007554 3.2e-61 240.0 293 44.7
AagrBONN_evm.TU.Sc2ySwM_117.495 Anthoceros agrestis HOM05D000726 ORTHO05D007554 9.5e-58 228.4 235 49.8
SEGI_06920 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 5.8e-55 219.2 358 37.4
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 7.3e-50 202.2 154 66.2
HPP92_028352 Vanilla planifolia HOM05D000726 ORTHO05D007554 4.2e-45 186.4 150 59.3
SEGI_24863 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 7.3e-42 175.6 283 38.5
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 4.0e-40 169.9 320 34.4
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 6.9e-40 169.1 319 35.7
PRCOL_00006071 Prasinoderma coloniale HOM05D000726 ORTHO05D007554 1.3e-33 148.3 245 36.3
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 2.4e-32 144.1 111 64.9
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 1.9e-29 134.4 111 64.9
Cre06.g262800 Chlamydomonas reinhardtii HOM05D000726 ORTHO05D007554 2.1e-28 131.0 275 33.1
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 1.3e-27 128.3 97 64.9
Glyma.11G048432 Glycine max HOM05D000726 ORTHO05D007554 1.9e-21 107.8 97 56.7
Lj7C94G0 Lonicera japonica HOM05D000726 ORTHO05D007554 1.1e-18 98.6 203 35.0
CBR_g29418 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-17 93.6 127 41.7
Lsat_1_v5_gn_2_113660 Lactuca sativa HOM05D000726 ORTHO05D007554 1.6e-09 68.2 61 55.7
SEGI_38739 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 1.0e-06 58.9 58 43.1


User provided reference genes

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