Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0069400 Salix brachista HOM05D005131 ORTHO05D006645 3.5e-85 318.2 151 100.0
Potri.016G068400 Populus trichocarpa HOM05D005131 ORTHO05D006645 6.4e-63 244.2 120 95.8
CiPaw.10G018800 Carya illinoinensis HOM05D005131 ORTHO05D006645 9.9e-56 220.3 125 81.6
BcaC02g09261 Brassica carinata HOM05D005131 ORTHO05D006645 2.2e-55 219.2 119 85.7
Manes.08G034500 Manihot esculenta HOM05D005131 ORTHO05D006645 2.2e-55 219.2 118 83.9
BcaB02g08573 Brassica carinata HOM05D005131 ORTHO05D006645 2.9e-55 218.8 119 85.7
Dinv12349 Davidia involucrata HOM05D005131 ORTHO05D006645 4.9e-55 218.0 123 82.1
GSVIVG01022599001 Vitis vinifera HOM05D005131 ORTHO05D006645 6.4e-55 217.6 118 84.7
Actinidia37756 Actinidia chinensis HOM05D005131 ORTHO05D006645 8.4e-55 217.2 120 83.3
Lj1g0022682 Lotus japonicus HOM05D005131 ORTHO05D006645 1.9e-54 216.1 118 83.1
Cpa.g.sc104.11 Carica papaya HOM05D005131 ORTHO05D006645 3.2e-54 215.3 119 83.2
Migut.J00690 Erythranthe guttata HOM05D005131 ORTHO05D006645 3.2e-54 215.3 117 82.9
FvH4_6g20480 Fragaria vesca HOM05D005131 ORTHO05D006645 3.2e-54 215.3 119 81.5
FAN14G5766 Fragaria x ananassa HOM05D005131 ORTHO05D006645 3.2e-54 215.3 120 80.0
Sp5g09900 Schrenkiella parvula HOM05D005131 ORTHO05D006645 3.2e-54 215.3 119 84.9
VMungo1383G1979 Vigna mungo HOM05D005131 ORTHO05D006645 3.2e-54 215.3 118 81.4
Rhsim03G0063800 Rhododendron simsii HOM05D005131 ORTHO05D006645 4.2e-54 214.9 118 82.2
FAN05G1272 Fragaria x ananassa HOM05D005131 ORTHO05D006645 5.5e-54 214.5 119 81.5
HanXRQChr13g0398521 Helianthus annuus HOM05D005131 ORTHO05D006645 7.1e-54 214.2 121 78.5
Glyma.19G200600 Glycine max HOM05D005131 ORTHO05D006645 9.3e-54 213.8 118 81.4
RcHm_v2.0_Chr3g0476361 Rosa chinensis HOM05D005131 ORTHO05D006645 9.3e-54 213.8 119 81.5
Carub.0005s1875 Capsella rubella HOM05D005131 ORTHO05D006645 1.2e-53 213.4 119 83.2
FAN05G3424 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.2e-53 213.4 119 81.5
Prupe.7G093300 Prunus persica HOM05D005131 ORTHO05D006645 1.2e-53 213.4 119 83.2
QL07p027488 Quercus lobata HOM05D005131 ORTHO05D006645 1.2e-53 213.4 118 81.4
Ciclev10012219m.g Citrus clementina HOM05D005131 ORTHO05D006645 1.6e-53 213.0 118 82.2
Nn2g14347 Nelumbo nucifera HOM05D005131 ORTHO05D006645 1.6e-53 213.0 118 83.1
Phvul.001G196500 Phaseolus vulgaris HOM05D005131 ORTHO05D006645 1.6e-53 213.0 118 80.5
Atru.chr8.1330 Acer truncatum HOM05D005131 ORTHO05D006645 2.1e-53 212.6 119 81.5
vmacro07486 Vaccinium macrocarpon HOM05D005131 ORTHO05D006645 2.1e-53 212.6 118 80.5
Aa31LG10G7440 Aethionema arabicum HOM05D005131 ORTHO05D006645 2.7e-53 212.2 118 82.2
MSTRG.5889 Avicennia marina HOM05D005131 ORTHO05D006645 2.7e-53 212.2 118 83.1
C04p40630 Brassica napus HOM05D005131 ORTHO05D006645 3.5e-53 211.8 127 80.3
BolC4t25644H Brassica oleracea HOM05D005131 ORTHO05D006645 3.5e-53 211.8 127 80.3
CsaV3_3G038080 Cucumis sativus L. HOM05D005131 ORTHO05D006645 3.5e-53 211.8 124 78.2
Lsat_1_v5_gn_6_33480 Lactuca sativa HOM05D005131 ORTHO05D006645 3.5e-53 211.8 118 78.8
TPR.G31287 Trifolium pratense HOM05D005131 ORTHO05D006645 3.5e-53 211.8 118 82.2
Ah.12g059320 Amaranthus hybridus HOM05D005131 ORTHO05D006645 4.6e-53 211.5 118 81.4
AL5G33050 Arabidopsis lyrata HOM05D005131 ORTHO05D006645 6.0e-53 211.1 119 81.5
AT3G52390 Arabidopsis thaliana HOM05D005131 ORTHO05D006645 6.0e-53 211.1 119 81.5
CSS0022283 Camellia sinensis var. sinensis HOM05D005131 ORTHO05D006645 6.0e-53 211.1 118 83.1
AUR62036353 Chenopodium quinoa HOM05D005131 ORTHO05D006645 6.0e-53 211.1 124 76.6
PSO384G4687 Papaver somniferum HOM05D005131 ORTHO05D006645 6.0e-53 211.1 119 79.8
AUR62030719 Chenopodium quinoa HOM05D005131 ORTHO05D006645 7.9e-53 210.7 123 78.0
ClCG10G018240 Citrullus lanatus HOM05D005131 ORTHO05D006645 7.9e-53 210.7 124 79.0
Manes.09G044500 Manihot esculenta HOM05D005131 ORTHO05D006645 7.9e-53 210.7 119 82.4
TWI74G0987 Tripterygium wilfordii HOM05D005131 ORTHO05D006645 7.9e-53 210.7 119 81.5
BraA04t16401Z Brassica rapa HOM05D005131 ORTHO05D006645 1.0e-52 210.3 127 79.5
Lalb_Chr20g0111311 Lupinus albus HOM05D005131 ORTHO05D006645 1.0e-52 210.3 118 81.4
MBI12_g38626_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 1.0e-52 210.3 120 80.0
Medtr7g106430 Medicago truncatula HOM05D005131 ORTHO05D006645 1.0e-52 210.3 118 80.5
PGSC0003DMG401020557 Solanum tuberosum HOM05D005131 ORTHO05D006645 1.0e-52 210.3 124 77.4
MELO3C031004.2 Cucumis melo HOM05D005131 ORTHO05D006645 1.3e-52 209.9 117 81.2
Thhalv10010578m.g Eutrema salsugineum HOM05D005131 ORTHO05D006645 1.3e-52 209.9 119 80.7
PSO339G6419 Papaver somniferum HOM05D005131 ORTHO05D006645 1.3e-52 209.9 119 79.8
MD12G1041900 Malus domestica HOM05D005131 ORTHO05D006645 3.0e-52 208.8 119 81.5
A04p07040 Brassica napus HOM05D005131 ORTHO05D006645 3.9e-52 208.4 127 78.7
Cc06_g06690 Coffea canephora HOM05D005131 ORTHO05D006645 3.9e-52 208.4 119 78.2
CARHR162160 Cardamine hirsuta HOM05D005131 ORTHO05D006645 5.1e-52 208.0 118 82.2
Peaxi162Scf00012g02523 Petunia axillaris HOM05D005131 ORTHO05D006645 6.7e-52 207.6 117 81.2
Sed0026420 Sechium edule HOM05D005131 ORTHO05D006645 6.7e-52 207.6 123 77.2
Solyc06g007310.4 Solanum lycopersicum HOM05D005131 ORTHO05D006645 6.7e-52 207.6 117 78.6
Sopen06g002230 Solanum pennellii HOM05D005131 ORTHO05D006645 6.7e-52 207.6 117 78.6
Nitab4.5_0000121g0080 Nicotiana tabacum HOM05D005131 ORTHO05D006645 8.7e-52 207.2 117 79.5
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 1.1e-51 206.8 118 78.0
Nitab4.5_0012238g0010 Nicotiana tabacum HOM05D005131 ORTHO05D006645 1.5e-51 206.5 117 79.5
Gohir.D09G129600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.9e-51 206.1 118 80.5
Gorai.006G148500 Gossypium raimondii HOM05D005131 ORTHO05D006645 1.9e-51 206.1 118 80.5
Hma1.2p1_0079F.1_g041720 Hydrangea macrophylla HOM05D005131 ORTHO05D006645 1.9e-51 206.1 118 79.7
EL10Ac5g11853 Beta vulgaris HOM05D005131 ORTHO05D006645 2.5e-51 205.7 118 78.8
CANSAT64G0057 Cannabis sativa HOM05D005131 ORTHO05D006645 4.3e-51 204.9 120 80.8
Duzib128G0735 Durio zibethinus HOM05D005131 ORTHO05D006645 4.3e-51 204.9 118 80.5
Sc22g0002890 Simmondsia chinensis HOM05D005131 ORTHO05D006645 9.6e-51 203.8 116 81.0
Haze_20155 Corylus avellana HOM05D005131 ORTHO05D006645 1.3e-50 203.4 116 81.0
Haze_20150 Corylus avellana HOM05D005131 ORTHO05D006645 1.6e-50 203.0 122 77.9
THA.LOC104803758 Tarenaya hassleriana HOM05D005131 ORTHO05D006645 1.6e-50 203.0 118 78.8
Ca_09063_v3 Cicer arietinum L. HOM05D005131 ORTHO05D006645 2.1e-50 202.6 119 79.0
DCAR_009180 Daucus carota HOM05D005131 ORTHO05D006645 2.1e-50 202.6 117 76.1
CAN.G869.8 Capsicum annuum HOM05D005131 ORTHO05D006645 6.2e-50 201.1 116 78.4
COL.COLO4_29542 Corchorus olitorius HOM05D005131 ORTHO05D006645 6.2e-50 201.1 119 77.3
Os07g0158200 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 8.1e-50 200.7 116 78.4
Gohir.A09G133400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.8e-49 199.5 118 77.1
Eucgr.A02573 Eucalyptus grandis HOM05D005131 ORTHO05D006645 2.4e-49 199.1 120 75.0
Psat3g205680 Pisum sativum HOM05D005131 ORTHO05D006645 2.4e-49 199.1 115 78.3
Aqoxy2G00625 Aquilegia oxysepala HOM05D005131 ORTHO05D006645 3.1e-49 198.7 118 78.0
PGR004G1515 Punica granatum HOM05D005131 ORTHO05D006645 3.1e-49 198.7 125 71.2
CAN.G741.26 Capsicum annuum HOM05D005131 ORTHO05D006645 1.5e-48 196.4 116 76.7
HPP92_013927 Vanilla planifolia HOM05D005131 ORTHO05D006645 1.5e-48 196.4 125 72.8
Hund14967 Selenicereus undatus HOM05D005131 ORTHO05D006645 3.4e-48 195.3 123 74.0
Thecc.05G106400 Theobroma cacao HOM05D005131 ORTHO05D006645 2.2e-47 192.6 118 77.1
Zm00001eb117460 Zea mays HOM05D005131 ORTHO05D006645 3.8e-47 191.8 116 75.9
Hund10854 Selenicereus undatus HOM05D005131 ORTHO05D006645 4.9e-47 191.4 119 72.3
HPP92_012180 Vanilla planifolia HOM05D005131 ORTHO05D006645 4.9e-47 191.4 115 71.3
HPP92_026830 Vanilla planifolia HOM05D005131 ORTHO05D006645 7.1e-46 187.6 116 73.3
Zm00001eb002330 Zea mays HOM05D005131 ORTHO05D006645 7.1e-46 187.6 121 73.6
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 3.9e-44 181.8 100 82.0
Zm00001eb419840 Zea mays HOM05D005131 ORTHO05D006645 1.1e-43 180.3 116 72.4
SEGI_21507 Sequoiadendron giganteum HOM05D005131 ORTHO05D006645 1.4e-41 173.3 117 65.8
Pp3c11_16390 Physcomitrium patens HOM05D005131 ORTHO05D006645 1.8e-41 172.9 119 64.7
SHI18412 Sapria himalayana HOM05D005131 ORTHO05D006645 1.0e-39 167.2 116 63.8
arahy.Tifrunner.gnm1.ann1.275XDC Arachis hypogaea HOM05D005131 ORTHO05D006645 1.7e-39 166.4 126 65.9
ATR0697G267 Amborella trichopoda HOM05D005131 ORTHO05D006645 3.8e-39 165.2 100 72.0
TAR636G0548 Trochodendron aralioides HOM05D005131 ORTHO05D006645 6.1e-37 157.9 87 82.8
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 1.0e-36 157.1 117 61.5
CBR_g41666 Chara braunii HOM05D005131 ORTHO05D006645 2.3e-36 156.0 121 57.9
arahy.Tifrunner.gnm1.ann1.X3LXDK Arachis hypogaea HOM05D005131 ORTHO05D006645 1.5e-35 153.3 149 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2339 Anthoceros agrestis HOM05D005131 ORTHO05D006645 1.6e-34 149.8 111 62.2
unitig_26.g9145 Utricularia gibba HOM05D005131 ORTHO05D006645 1.4e-30 136.7 73 83.6
SMO334G0001 Selaginella moellendorffii HOM05D005131 ORTHO05D006645 4.2e-30 135.2 101 59.4
FAN02G0570 Fragaria x ananassa HOM05D005131 ORTHO05D006645 9.4e-30 134.0 73 84.9
Lj7A140G6 Lonicera japonica HOM05D005131 ORTHO05D006645 1.8e-28 129.8 76 76.3
Gohir.A05G372400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 2.3e-28 129.4 72 80.6
Gohir.A09G012800 Gossypium hirsutum HOM05D005131 ORTHO05D006645 2.3e-28 129.4 72 80.6
Gohir.A13G054600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 2.3e-28 129.4 72 80.6
Oeu035639.1 Olea europaea HOM05D005131 ORTHO05D006645 2.3e-28 129.4 73 80.8
MSTRG.18896 Avicennia marina HOM05D005131 ORTHO05D006645 9.7e-27 124.0 69 82.6
Cre02.g085650 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D006645 1.1e-25 120.6 113 53.1
Zm00001eb324820 Zea mays HOM05D005131 ORTHO05D006645 5.3e-25 118.2 73 75.3
Zm00001eb083350 Zea mays HOM05D005131 ORTHO05D006645 1.2e-24 117.1 73 74.0
Haze_27322 Corylus avellana HOM05D005131 ORTHO05D006645 5.2e-20 101.7 104 51.9
MCO14G398 Micromonas commoda HOM05D005131 ORTHO05D006645 5.2e-20 101.7 110 45.5
PRCOL_00003277 Prasinoderma coloniale HOM05D005131 ORTHO05D006645 1.3e-15 87.0 105 38.1
MD14G1041100 Malus domestica HOM05D005131 ORTHO05D006645 2.9e-15 85.9 49 77.6
A01p30550 Brassica napus HOM05D005131 ORTHO05D033215 1.9e-14 83.2 42 92.9
BraA01t03187Z Brassica rapa HOM05D005131 ORTHO05D033215 1.9e-14 83.2 42 92.9
BolC1t02473H Brassica oleracea HOM05D005131 ORTHO05D033215 2.7e-13 79.3 42 88.1
Os08g0165800 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 4.0e-12 75.5 44 75.0
TAR633G0521 Trochodendron aralioides HOM05D005131 ORTHO05D006645 8.2e-10 67.8 46 60.9
FvH4_2g19461 Fragaria vesca HOM05D005131 ORTHO05D006645 1.7e-07 60.1 51 52.9
CAN.G1767.1 Capsicum annuum HOM05D000162 ORTHO05D000090 4.2e-06 55.5 78 41.0


User provided reference genes

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