Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 4.0e-207 724.5 370 100.0
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.3e-152 543.5 371 80.1
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.6e-99 367.1 381 55.4
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 4.9e-96 355.5 377 55.2
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 1.0e-90 337.8 375 51.7
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.4e-87 327.4 375 50.4
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.7e-86 323.2 374 50.0
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.6e-86 322.4 374 50.3
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 1.0e-85 321.2 377 49.3
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.3e-85 320.9 370 51.6
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.5e-84 317.4 372 50.0
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 7.3e-84 315.1 378 50.0
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.4e-82 310.8 372 50.5
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 2.3e-82 310.1 378 47.4
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 5.8e-81 305.4 382 48.4
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 6.4e-80 302.0 372 47.6
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 5.0e-77 292.4 357 48.2
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 5.0e-77 292.4 370 46.5
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 1.1e-76 291.2 380 48.2
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.9e-76 290.4 374 47.9
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 9.5e-76 288.1 371 45.3
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 6.2e-75 285.4 369 46.1
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 8.1e-75 285.0 371 45.8
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 2.2e-72 276.9 382 46.3
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 6.4e-72 275.4 374 45.5
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 4.1e-71 272.7 378 46.0
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 4.1e-71 272.7 378 46.0
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.2e-70 271.2 377 43.5
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 3.5e-70 269.6 380 44.5
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 3.5e-70 269.6 377 43.8
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 4.6e-70 269.2 370 43.2
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 1.0e-69 268.1 375 45.3
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 2.3e-69 266.9 387 41.9
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 6.6e-69 265.4 295 50.8
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.5e-68 264.2 372 43.3
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 2.5e-68 263.5 375 44.8
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 2.5e-68 263.5 422 39.8
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 7.3e-68 261.9 374 42.0
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 7.3e-68 261.9 372 43.5
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 9.5e-68 261.5 368 42.1
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 9.5e-68 261.5 374 42.0
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.6e-67 260.8 374 42.0
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.6e-67 260.8 383 43.1
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 4.7e-67 259.2 410 43.7
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.1e-66 258.1 374 41.4
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 1.4e-66 257.7 367 44.4
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 1.8e-66 257.3 377 41.4
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 5.2e-66 255.8 375 44.5
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 2.4e-63 246.9 370 44.1
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 7.1e-63 245.4 371 43.9
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 2.7e-62 243.4 374 39.8
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 4.6e-62 242.7 373 41.3
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 3.0e-61 240.0 374 43.3
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 3.0e-61 240.0 338 44.7
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 2.1e-59 233.8 378 39.7
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 1.4e-58 231.1 265 50.9
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.8e-58 230.7 295 46.8
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 2.0e-57 227.3 379 40.4
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 5.8e-57 225.7 311 46.0
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 5.8e-57 225.7 336 42.0
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 9.9e-57 224.9 374 40.6
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 3.8e-56 223.0 367 39.5
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 8.4e-56 221.9 274 45.3
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.4e-55 221.1 368 38.6
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.9e-55 220.7 368 38.6
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 1.0e-53 214.9 371 37.5
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.0e-53 214.9 371 38.8
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 1.7e-53 214.2 397 37.3
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.3e-53 213.8 373 38.1
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 2.5e-52 210.3 350 41.4
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 5.6e-52 209.1 370 37.8
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 7.3e-52 208.8 338 38.8
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 9.6e-52 208.4 263 46.4
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.4e-50 204.5 370 37.6
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.4e-50 204.5 301 40.5
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 2.0e-49 200.7 371 37.7
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 2.9e-48 196.8 372 36.6
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 3.8e-48 196.4 364 37.1
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.8e-48 196.4 339 40.4
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 1.7e-45 187.6 376 36.2
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.5e-44 184.5 350 35.1
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 6.2e-43 179.1 344 36.9
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 2.6e-41 173.7 368 34.0
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.4e-39 167.9 339 35.1
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 3.2e-39 166.8 318 37.7
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 3.9e-37 159.8 314 36.6
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 6.7e-37 159.1 373 33.8
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 4.8e-35 152.9 218 41.3
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 6.2e-35 152.5 375 32.8
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 6.9e-34 149.1 222 39.2
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.1e-31 141.7 388 27.8
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 7.1e-31 139.0 118 55.1
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.5e-30 136.7 92 67.4
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 7.9e-30 135.6 220 38.6
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.1e-26 125.2 169 45.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.1e-26 123.6 85 64.7
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 1.7e-24 117.9 297 31.3
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.9e-20 104.4 132 49.2
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.0e-16 92.0 98 57.1
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.3e-16 91.7 86 60.5
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 1.1e-15 88.6 67 67.2
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 4.2e-15 86.7 370 24.1
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 3.3e-12 77.0 113 41.6
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 3.3e-12 77.0 138 37.0
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 9.7e-12 75.5 70 58.6
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 6.3e-11 72.8 415 21.4
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 2.4e-10 70.9 41 80.5
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 4.5e-09 66.6 45 64.4
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.0e-08 65.5 66 51.5
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 8.5e-08 62.4 47 59.6
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.6e-06 58.2 414 19.8
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.7e-06 57.4 81 42.0
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 3.6e-06 57.0 107 31.8


User provided reference genes

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