Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 7.6e-200 700.3 348 100.0
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.2e-184 649.8 355 91.3
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.7e-183 646.0 348 90.8
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.4e-182 642.9 348 89.9
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 3.7e-162 575.1 351 80.1
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 6.2e-162 574.3 352 79.5
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.9e-158 562.8 350 78.9
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.5e-157 558.5 349 77.9
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 4.6e-157 558.1 365 75.6
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 6.7e-156 554.3 350 76.0
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 8.7e-156 553.9 353 76.8
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 3.3e-155 552.0 350 75.7
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 4.3e-155 551.6 352 75.3
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.3e-155 551.6 352 75.3
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 5.7e-155 551.2 354 76.0
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.7e-154 548.5 353 75.6
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 6.3e-154 547.7 355 74.9
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.4e-153 546.6 352 75.6
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.8e-153 546.2 352 77.3
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.5e-152 543.1 352 74.4
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 2.0e-152 542.7 350 74.0
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.6e-152 542.3 348 74.1
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.4e-152 542.0 349 77.4
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 4.5e-152 541.6 356 74.2
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 5.9e-152 541.2 354 74.6
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 7.7e-152 540.8 363 74.1
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 5.0e-151 538.1 364 72.0
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 6.5e-151 537.7 359 73.3
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.4e-150 536.6 351 72.6
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.2e-150 535.4 349 72.8
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.2e-150 534.3 349 72.5
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.2e-149 533.5 353 73.4
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 1.6e-149 533.1 352 72.4
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 2.1e-149 532.7 354 72.3
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.7e-149 532.3 353 73.1
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 3.6e-149 531.9 358 70.9
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 4.6e-149 531.6 352 71.6
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 6.1e-149 531.2 360 70.8
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.8e-148 529.6 352 71.3
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.8e-148 529.6 352 71.9
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 2.3e-148 529.3 361 71.5
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.3e-148 529.3 351 74.1
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 2.3e-148 529.3 353 72.2
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 3.0e-148 528.9 355 72.4
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 3.9e-148 528.5 365 71.0
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 3.9e-148 528.5 360 71.4
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 3.9e-148 528.5 356 73.0
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 5.1e-148 528.1 351 72.4
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 6.7e-148 527.7 360 70.8
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 6.7e-148 527.7 359 71.6
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 8.8e-148 527.3 350 72.9
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 8.8e-148 527.3 349 74.2
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.1e-147 526.9 352 72.2
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-147 526.9 350 71.7
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.5e-147 526.6 361 70.4
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.0e-147 526.2 351 70.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 2.5e-147 525.8 349 73.1
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 4.3e-147 525.0 355 70.7
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 9.7e-147 523.9 354 70.6
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.3e-146 523.5 353 72.8
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.3e-146 523.5 355 69.6
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.3e-146 523.5 355 70.4
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.7e-146 523.1 353 72.0
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 2.2e-146 522.7 348 73.3
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 2.2e-146 522.7 349 71.1
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 2.8e-146 522.3 352 72.4
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 3.7e-146 521.9 353 72.2
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 4.8e-146 521.5 355 69.6
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 8.2e-146 520.8 352 71.9
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.4e-145 520.0 351 71.8
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.4e-145 520.0 352 72.2
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.8e-145 519.6 350 70.9
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 2.4e-145 519.2 356 71.1
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-145 518.1 359 70.2
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 6.9e-145 517.7 348 73.0
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 4.5e-144 515.0 371 67.9
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 7.7e-144 514.2 356 71.9
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 1.3e-143 513.5 368 68.5
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 1.7e-143 513.1 349 71.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.7e-143 513.1 353 70.5
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 2.2e-143 512.7 358 70.4
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 3.8e-143 511.9 356 70.2
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.8e-143 511.9 350 70.3
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 5.0e-143 511.5 348 69.3
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 6.5e-143 511.1 348 70.4
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 6.5e-143 511.1 354 69.2
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 8.5e-143 510.8 359 69.9
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.1e-142 510.4 348 69.5
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 1.9e-142 509.6 355 69.6
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.5e-142 509.2 355 68.7
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 3.2e-142 508.8 351 68.9
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 3.2e-142 508.8 352 70.5
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 4.2e-142 508.4 360 67.5
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 4.2e-142 508.4 342 71.6
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 4.2e-142 508.4 355 68.7
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 4.2e-142 508.4 365 68.2
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 9.4e-142 507.3 360 67.5
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.6e-141 506.5 393 64.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 2.1e-141 506.1 350 69.4
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 3.6e-141 505.4 356 68.3
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 6.1e-141 504.6 361 67.0
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.4e-140 503.4 351 68.4
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.4e-140 503.4 355 68.5
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 3.9e-140 501.9 349 70.5
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 5.1e-140 501.5 358 68.2
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 2.6e-139 499.2 358 69.8
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.4e-139 498.4 348 68.4
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.7e-139 498.0 351 69.5
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 9.1e-137 490.7 349 67.0
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 5.0e-135 485.0 362 66.6
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.1e-134 483.8 349 67.6
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.6e-133 479.9 350 68.6
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 8.0e-133 477.6 332 67.5
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.3e-132 476.1 351 67.0
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 6.7e-132 474.6 357 67.2
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 8.8e-132 474.2 350 66.9
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 7.5e-131 471.1 354 64.7
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.3e-130 470.3 353 66.3
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 1.2e-128 463.8 328 68.6
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.5e-128 462.2 351 62.1
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 1.7e-127 459.9 348 61.8
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 2.2e-127 459.5 364 60.7
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 2.5e-126 456.1 364 61.0
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 4.2e-126 455.3 361 60.7
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 9.4e-126 454.1 351 63.0
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.3e-124 449.5 357 59.9
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 3.0e-124 449.1 356 61.2
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.3e-122 443.7 350 62.0
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.2e-122 443.0 353 60.6
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 4.7e-117 425.2 303 69.0
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 5.7e-115 418.3 295 70.2
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.7e-114 416.8 294 69.0
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.9e-106 389.4 350 58.0
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.0e-103 380.9 291 64.3
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 5.6e-102 375.2 348 56.9
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.8e-101 372.9 272 69.5
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 8.9e-100 367.9 327 57.2
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.4e-74 281.6 214 66.4
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.9e-73 280.4 273 53.1
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 7.1e-73 278.5 354 42.1
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 3.5e-72 276.2 241 63.1
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 4.9e-66 255.8 355 41.1
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.3e-63 247.7 156 72.4
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 9.6e-62 241.5 356 37.4
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.4e-57 226.9 192 60.4
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.5e-54 216.9 115 87.0
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.5e-51 207.6 142 66.9
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.8e-51 205.7 126 74.6
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.6e-32 144.4 191 45.5
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 7.9e-32 142.1 139 52.5
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-31 141.0 85 69.4
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 2.3e-31 140.6 130 57.7
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-30 138.3 85 68.2
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.6e-30 137.1 85 67.1
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-28 131.3 85 64.7
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 3.8e-26 123.2 183 38.8
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.0e-26 122.9 106 56.6
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 8.8e-23 112.1 185 40.5
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 4.8e-21 106.3 58 81.0
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 4.8e-21 106.3 63 76.2
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 4.8e-21 106.3 58 81.0
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-20 104.0 59 78.0
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 5.9e-19 99.4 139 35.3
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.0e-18 98.6 75 58.7
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 7.2e-17 92.4 61 68.9
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.2e-16 91.7 76 56.6
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.7e-16 90.5 55 72.7
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.1e-16 89.4 59 67.8
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-15 87.4 80 58.8
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 8.8e-15 85.5 75 57.3
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 5.7e-14 82.8 150 31.3
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 6.3e-13 79.3 49 65.3
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-12 78.6 37 81.1
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 3.1e-12 77.0 64 57.8
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.7e-11 73.9 82 46.3
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 9.4e-09 65.5 122 40.2
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 9.4e-09 65.5 50 56.0
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 4.7e-08 63.2 205 29.8
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 5.2e-07 59.7 53 54.7
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 8.8e-07 58.9 49 55.1


User provided reference genes

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