Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0061400 Salix brachista HOM05D003648 ORTHO05D004267 3.3e-176 621.7 341 100.0
Potri.016G058000 Populus trichocarpa HOM05D003648 ORTHO05D004267 1.9e-142 509.6 339 85.3
Potri.006G193500 Populus trichocarpa HOM05D003648 ORTHO05D004267 3.0e-116 422.5 353 74.8
Sabra06G0148600 Salix brachista HOM05D003648 ORTHO05D004267 1.8e-92 343.6 345 68.7
Potri.016G058100 Populus trichocarpa HOM05D003648 ORTHO05D004267 6.7e-84 315.1 352 58.2
Potri.006G193300 Populus trichocarpa HOM05D003648 ORTHO05D004267 2.4e-81 306.6 353 56.7
Sabra16G0061500 Salix brachista HOM05D003648 ORTHO05D004267 6.9e-81 305.1 350 57.1
Sabra06G0148400 Salix brachista HOM05D003648 ORTHO05D004267 1.7e-79 300.4 354 55.9
Manes.08G043500 Manihot esculenta HOM05D003648 ORTHO05D004267 3.3e-75 286.2 344 56.4
CiPaw.09G029700 Carya illinoinensis HOM05D003648 ORTHO05D004267 8.2e-74 281.6 361 54.0
Manes.09G036200 Manihot esculenta HOM05D003648 ORTHO05D004267 1.5e-72 277.3 341 52.5
Cfa020157 Carpinus fangiana HOM05D003648 ORTHO05D004267 5.9e-72 275.4 357 52.4
QL07p024078 Quercus lobata HOM05D003648 ORTHO05D004267 2.1e-69 266.9 375 54.4
Manes.08G043600 Manihot esculenta HOM05D003648 ORTHO05D004267 4.7e-69 265.8 347 50.7
Haze_20003 Corylus avellana HOM05D003648 ORTHO05D004267 1.1e-67 261.2 371 50.1
CiPaw.10G026000 Carya illinoinensis HOM05D003648 ORTHO05D004267 1.7e-63 247.3 375 49.6
Thecc.05G173300 Theobroma cacao HOM05D003648 ORTHO05D004267 6.1e-61 238.8 385 48.3
Haze_20001 Corylus avellana HOM05D003648 ORTHO05D004267 1.8e-60 237.3 395 45.6
Duzib128G0816 Durio zibethinus HOM05D003648 ORTHO05D004267 1.7e-58 230.7 385 48.8
Prupe.7G079000 Prunus persica HOM05D003648 ORTHO05D004267 4.8e-58 229.2 397 49.9
FAN14G0601 Fragaria x ananassa HOM05D003648 ORTHO05D004267 8.2e-58 228.4 376 45.5
FAN09G0401 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.6e-56 224.2 372 45.7
RcHm_v2.0_Chr3g0479411 Rosa chinensis HOM05D003648 ORTHO05D004267 2.0e-56 223.8 376 45.5
FvH4_6g22070 Fragaria vesca HOM05D003648 ORTHO05D004267 3.5e-56 223.0 375 44.8
FAN02G2154 Fragaria x ananassa HOM05D003648 ORTHO05D004267 5.9e-56 222.2 374 44.7
FAN05G4067 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.0e-55 221.5 374 44.7
Atru.chr8.1128 Acer truncatum HOM05D003648 ORTHO05D004267 5.5e-54 215.7 357 47.3
Duzib093G1879 Durio zibethinus HOM05D003648 ORTHO05D004267 1.6e-53 214.2 384 44.8
Ciclev10012160m.g Citrus clementina HOM05D003648 ORTHO05D004267 2.6e-51 206.8 344 50.0
TWI77G0250 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 2.6e-51 206.8 355 45.1
COL.COLO4_29331 Corchorus olitorius HOM05D003648 ORTHO05D004267 9.8e-51 204.9 396 46.2
TWI53G1880 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 8.3e-50 201.8 361 46.5
VMungo0720G1699 Vigna mungo HOM05D003648 ORTHO05D004267 4.1e-49 199.5 378 42.9
Gohir.A04G053800 Gossypium hirsutum HOM05D003648 ORTHO05D004267 5.4e-49 199.1 371 46.6
MD14G1055800 Malus domestica HOM05D003648 ORTHO05D004267 1.2e-48 198.0 382 43.5
Gohir.D04G089900 Gossypium hirsutum HOM05D003648 ORTHO05D004267 5.9e-48 195.7 370 46.2
Cpa.g.sc85.54 Carica papaya HOM05D003648 ORTHO05D004267 1.5e-46 191.0 363 43.3
Medtr1g054175 Medicago truncatula HOM05D003648 ORTHO05D004267 1.5e-46 191.0 290 45.5
Nn2g15698 Nelumbo nucifera HOM05D003648 ORTHO05D004267 3.6e-45 186.4 409 41.6
Gohir.A01G137604 Gossypium hirsutum HOM05D003648 ORTHO05D004267 4.0e-44 183.0 360 43.6
Dinv14314 Davidia involucrata HOM05D003648 ORTHO05D004267 5.2e-44 182.6 276 50.7
Glyma.09G110100 Glycine max HOM05D003648 ORTHO05D004267 5.2e-44 182.6 368 43.8
Glyma.03G145500 Glycine max HOM05D003648 ORTHO05D004267 1.5e-43 181.0 380 48.4
Glyma.19G148700 Glycine max HOM05D003648 ORTHO05D004267 5.7e-43 179.1 383 46.7
Lalb_Chr18g0047921 Lupinus albus HOM05D003648 ORTHO05D004267 4.9e-42 176.0 380 43.4
Eucgr.A02456 Eucalyptus grandis HOM05D003648 ORTHO05D004267 1.4e-41 174.5 365 44.1
Phvul.007G260600 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 1.4e-41 174.5 364 42.6
Lj1g0001044 Lotus japonicus HOM05D003648 ORTHO05D004267 4.1e-41 172.9 360 40.6
MD12G1056100 Malus domestica HOM05D003648 ORTHO05D004267 4.1e-41 172.9 385 41.0
Lalb_Chr18g0047911 Lupinus albus HOM05D003648 ORTHO05D004267 2.7e-40 170.2 376 42.8
TPR.G15988 Trifolium pratense HOM05D003648 ORTHO05D004267 2.7e-40 170.2 260 45.4
CSS0001516 Camellia sinensis var. sinensis HOM05D003648 ORTHO05D004267 1.7e-39 167.5 312 47.8
Glyma.02G171900 Glycine max HOM05D003648 ORTHO05D004267 2.9e-39 166.8 358 41.3
Gohir.D01G125600 Gossypium hirsutum HOM05D003648 ORTHO05D004267 5.0e-39 166.0 359 41.8
VMungo1383G3335 Vigna mungo HOM05D003648 ORTHO05D004267 5.0e-39 166.0 365 45.2
Sed0001893 Sechium edule HOM05D003648 ORTHO05D004267 8.6e-39 165.2 336 42.9
Gorai.002G156300 Gossypium raimondii HOM05D003648 ORTHO05D004267 1.1e-38 164.9 359 40.7
CsaV3_3G038720 Cucumis sativus L. HOM05D003648 ORTHO05D004267 2.5e-38 163.7 343 39.7
Actinidia22042 Actinidia chinensis HOM05D003648 ORTHO05D004267 7.3e-38 162.2 327 40.7
Phvul.001G143000 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 7.3e-38 162.2 391 43.2
TPR.G18228 Trifolium pratense HOM05D003648 ORTHO05D004267 1.2e-37 161.4 370 41.9
Peaxi162Scf00480g00036 Petunia axillaris HOM05D003648 ORTHO05D004267 2.1e-37 160.6 349 40.7
TAR633G0715 Trochodendron aralioides HOM05D003648 ORTHO05D004267 3.6e-37 159.8 372 41.7
CANSAT64G1307 Cannabis sativa HOM05D003648 ORTHO05D004267 8.0e-37 158.7 442 39.4
Gohir.1Z049549 Gossypium hirsutum HOM05D003648 ORTHO05D004267 4.0e-36 156.4 209 55.0
Hma1.2p1_0431F.1_g151600 Hydrangea macrophylla HOM05D003648 ORTHO05D004267 8.9e-36 155.2 362 40.9
MELO3C009616.2 Cucumis melo HOM05D003648 ORTHO05D004267 3.4e-35 153.3 357 39.2
DCAR_013539 Daucus carota HOM05D003648 ORTHO05D004267 5.7e-35 152.5 370 38.1
Medtr7g093360 Medicago truncatula HOM05D003648 ORTHO05D004267 7.5e-35 152.1 368 38.6
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea HOM05D003648 ORTHO05D004267 9.8e-35 151.8 398 40.2
Medtr7g093350 Medicago truncatula HOM05D003648 ORTHO05D004267 9.8e-35 151.8 359 39.3
Nn7g35998 Nelumbo nucifera HOM05D003648 ORTHO05D004267 3.7e-34 149.8 401 37.9
Cc06_g15770 Coffea canephora HOM05D003648 ORTHO05D004267 1.4e-33 147.9 177 49.7
Gorai.012G100300 Gossypium raimondii HOM05D003648 ORTHO05D004267 1.8e-33 147.5 259 48.3
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea HOM05D003648 ORTHO05D004267 4.1e-33 146.4 402 39.1
arahy.Tifrunner.gnm1.ann1.D8BKSU Arachis hypogaea HOM05D003648 ORTHO05D004267 1.6e-32 144.4 350 38.6
Actinidia32398 Actinidia chinensis HOM05D003648 ORTHO05D004267 2.0e-32 144.1 342 37.7
Lj5g0018704 Lotus japonicus HOM05D003648 ORTHO05D004267 2.7e-32 143.7 357 44.0
Dinv24064 Davidia involucrata HOM05D003648 ORTHO05D004267 2.3e-31 140.6 294 44.2
Nitab4.5_0006890g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 2.3e-31 140.6 343 37.6
TAR369G0578 Trochodendron aralioides HOM05D003648 ORTHO05D004267 2.3e-31 140.6 296 42.6
Actinidia22043 Actinidia chinensis HOM05D003648 ORTHO05D004267 3.0e-31 140.2 360 37.8
Rhsim03G0005500 Rhododendron simsii HOM05D003648 ORTHO05D004267 1.9e-30 137.5 348 36.5
arahy.Tifrunner.gnm1.ann1.DZ4RFW Arachis hypogaea HOM05D003648 ORTHO05D004267 2.8e-29 133.7 351 37.0
Nitab4.5_0003600g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 5.2e-28 129.4 336 37.2
Oeu007752.1 Olea europaea HOM05D003648 ORTHO05D004267 5.2e-28 129.4 331 35.0
Psat3g068040 Pisum sativum HOM05D003648 ORTHO05D004267 5.2e-28 129.4 290 39.7
ClCG10G017600 Citrullus lanatus HOM05D003648 ORTHO05D004267 2.0e-27 127.5 329 33.4
TAR623G0235 Trochodendron aralioides HOM05D003648 ORTHO05D004267 1.7e-26 124.4 266 39.8
THA.LOC104802623 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 2.2e-26 124.0 336 34.5
Lsat_1_v5_gn_9_26100 Lactuca sativa HOM05D003648 ORTHO05D004267 2.9e-26 123.6 362 35.6
Hund19206 Selenicereus undatus HOM05D003648 ORTHO05D004267 2.9e-26 123.6 357 35.6
GSVIVG01033479001 Vitis vinifera HOM05D003648 ORTHO05D004267 3.7e-26 123.2 329 35.3
EL10Ac3g06898 Beta vulgaris HOM05D003648 ORTHO05D004267 6.4e-26 122.5 343 40.5
Nn7g35986 Nelumbo nucifera HOM05D003648 ORTHO05D004267 2.4e-25 120.6 380 35.0
MSTRG.19911 Avicennia marina HOM05D003648 ORTHO05D004267 4.1e-25 119.8 355 34.9
Psat0s5171g0040 Pisum sativum HOM05D003648 ORTHO05D004267 7.0e-25 119.0 280 38.9
vmacro07898 Vaccinium macrocarpon HOM05D003648 ORTHO05D004267 2.7e-24 117.1 123 56.9
AL4G40410 Arabidopsis lyrata HOM05D003648 ORTHO05D004267 1.3e-23 114.8 329 34.3
DCAR_017003 Daucus carota HOM05D003648 ORTHO05D004267 3.0e-23 113.6 283 34.6
PGR004G0238 Punica granatum HOM05D003648 ORTHO05D004267 3.9e-23 113.2 365 35.1
CARHR137130 Cardamine hirsuta HOM05D003648 ORTHO05D004267 6.6e-23 112.5 329 35.0
AT2G42040 Arabidopsis thaliana HOM05D003648 ORTHO05D004267 8.6e-23 112.1 329 33.1
BcaB01g03435 Brassica carinata HOM05D003648 ORTHO05D004267 1.5e-22 111.3 345 35.1
Dinv16371 Davidia involucrata HOM05D003648 ORTHO05D004267 1.9e-22 110.9 357 32.5
Nn2g15714 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.9e-22 110.9 234 41.0
A03p23540 Brassica napus HOM05D003648 ORTHO05D004267 2.5e-22 110.5 333 36.6
MSTRG.6486 Avicennia marina HOM05D003648 ORTHO05D004267 3.3e-22 110.2 340 36.2
MBI19_g23209_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 4.3e-22 109.8 126 53.2
CAN.G128.46 Capsicum annuum HOM05D003648 ORTHO05D004267 1.2e-21 108.2 297 34.0
THA.LOC104824476 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 1.6e-21 107.8 333 36.3
MBI13_g32435_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 2.1e-21 107.5 76 72.4
C03p28080 Brassica napus HOM05D003648 ORTHO05D004267 3.6e-21 106.7 327 34.9
MBI19_g43859_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 8.1e-21 105.5 70 74.3
BcaC01g05312 Brassica carinata HOM05D003648 ORTHO05D004267 1.8e-20 104.4 327 36.1
CAN.G128.47 Capsicum annuum HOM05D003648 ORTHO05D004267 2.3e-20 104.0 352 31.0
Oeu039811.1 Olea europaea HOM05D003648 ORTHO05D004267 2.3e-20 104.0 169 40.8
Aa31LG1G24140 Aethionema arabicum HOM05D003648 ORTHO05D004267 4.0e-20 103.2 329 33.7
BolC4t28447H Brassica oleracea HOM05D003648 ORTHO05D004267 4.0e-20 103.2 338 32.8
BolC3t15177H Brassica oleracea HOM05D003648 ORTHO05D004267 5.2e-20 102.8 126 50.0
BraA03t11571Z Brassica rapa HOM05D003648 ORTHO05D004267 5.2e-20 102.8 333 33.9
GSVIVG01033486001 Vitis vinifera HOM05D003648 ORTHO05D004267 8.9e-20 102.1 126 49.2
C04p69480 Brassica napus HOM05D003648 ORTHO05D004267 1.5e-19 101.3 338 34.9
Migut.J01846 Erythranthe guttata HOM05D003648 ORTHO05D004267 4.4e-19 99.8 172 43.0
HanXRQChr10g0289891 Helianthus annuus HOM05D003648 ORTHO05D004267 4.4e-19 99.8 330 31.8
SpUn1032_0010 Schrenkiella parvula HOM05D003648 ORTHO05D004267 4.4e-19 99.8 122 49.2
Ah.04g152510 Amaranthus hybridus HOM05D003648 ORTHO05D004267 7.5e-19 99.0 334 35.9
PGSC0003DMG400023669 Solanum tuberosum HOM05D003648 ORTHO05D004267 9.9e-19 98.6 347 32.9
Thhalv10017052m.g Eutrema salsugineum HOM05D003648 ORTHO05D004267 1.3e-18 98.2 127 52.0
Carub.0004s2437 Capsella rubella HOM05D003648 ORTHO05D004267 1.7e-18 97.8 328 32.3
Solyc10g080530.2 Solanum lycopersicum HOM05D003648 ORTHO05D004267 1.7e-18 97.8 348 33.6
Ah.13g075770 Amaranthus hybridus HOM05D003648 ORTHO05D004267 2.9e-18 97.1 329 36.5
BcaC02g07267 Brassica carinata HOM05D003648 ORTHO05D004267 4.9e-18 96.3 338 32.2
SalBow6G7267 Salvia bowleyana HOM05D003648 ORTHO05D004267 4.9e-18 96.3 265 36.6
BraA05t19262Z Brassica rapa HOM05D003648 ORTHO05D004267 8.3e-18 95.5 341 33.4
CDE05G0371 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 8.3e-18 95.5 130 48.5
Aqoxy2G00100 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 1.9e-17 94.4 139 46.0
BcaC02g12455 Brassica carinata HOM05D003648 ORTHO05D004267 2.4e-17 94.0 341 33.4
A05p02700 Brassica napus HOM05D003648 ORTHO05D004267 2.4e-17 94.0 341 33.1
C04p03220 Brassica napus HOM05D003648 ORTHO05D004267 2.4e-17 94.0 341 33.4
BolC4t21960H Brassica oleracea HOM05D003648 ORTHO05D004267 2.4e-17 94.0 341 33.4
A04p31970 Brassica napus HOM05D003648 ORTHO05D004267 4.1e-17 93.2 338 32.8
ECA247G1467 Erigeron canadensis HOM05D003648 ORTHO05D004267 4.1e-17 93.2 81 60.5
MBI19_g03064_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 4.1e-17 93.2 173 42.2
CDE04G2150 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 7.8e-16 89.0 133 43.6
CDE06G0452 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 3.0e-15 87.0 57 73.7
Nn7g36026 Nelumbo nucifera HOM05D003648 ORTHO05D004267 3.9e-15 86.7 93 52.7
CDE11G0439 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 6.6e-15 85.9 52 73.1
AUR62015354 Chenopodium quinoa HOM05D003648 ORTHO05D004267 6.6e-15 85.9 126 46.0
BcaB06g29223 Brassica carinata HOM05D003648 ORTHO05D004267 8.6e-15 85.5 41 90.2
BraA04t18655Z Brassica rapa HOM05D003648 ORTHO05D004267 8.6e-15 85.5 338 32.5
Os02g0773600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 8.6e-15 85.5 62 72.6
HPP92_016181 Vanilla planifolia HOM05D003648 ORTHO05D004267 3.3e-14 83.6 141 41.1
HPP92_026735 Vanilla planifolia HOM05D003648 ORTHO05D004267 3.3e-14 83.6 141 41.1
Os06g0207600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 1.2e-13 81.6 40 87.5
Zm00001eb193290 Zea mays HOM05D003648 ORTHO05D004267 1.2e-11 75.1 88 50.0
ATR0598G173 Amborella trichopoda HOM05D003648 ORTHO05D004267 2.0e-11 74.3 163 33.1
SEGI_21966 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 7.6e-11 72.4 42 73.8
SEGI_22789 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 7.6e-11 72.4 56 58.9
SEGI_34260 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.7e-10 71.2 42 71.4
Dinv36431 Davidia involucrata HOM05D003648 ORTHO05D004267 8.4e-10 68.9 35 82.9
Actinidia22048 Actinidia chinensis HOM05D003648 ORTHO05D014310 2.4e-09 67.4 313 29.4
SEGI_00470 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.6e-08 64.7 70 48.6
SEGI_09004 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.6e-08 64.7 185 31.9
ATR0598G250 Amborella trichopoda HOM05D003648 ORTHO05D004267 3.0e-07 60.5 60 50.0
Aqoxy1G04270 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 2.5e-06 57.4 45 57.8


User provided reference genes

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