Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0059400 Salix brachista HOM05D010229 ORTHO05D012533 2.6e-115 418.7 209 100.0
Sabra02G0102300 Salix brachista HOM05D010229 ORTHO05D012533 9.0e-39 164.5 272 41.9
Sabra07G0100900 Salix brachista HOM05D010229 ORTHO05D012533 2.7e-35 152.9 237 43.9
Sabra16G0314600 Salix brachista HOM05D010229 ORTHO05D000002 1.0e-34 151.0 236 42.8
Sabra17G0116100 Salix brachista HOM05D010229 ORTHO05D012533 3.0e-34 149.4 240 42.9
Sabra05G0134300 Salix brachista HOM05D010229 ORTHO05D012533 1.1e-33 147.5 164 52.4
Sabra17G0008800 Salix brachista HOM05D010229 ORTHO05D012533 9.0e-31 137.9 165 52.7
Sabra07G0073700 Salix brachista HOM05D001694 ORTHO05D000248 4.6e-27 125.6 183 47.5
Sabra03G0152600 Salix brachista HOM05D000004 ORTHO05D000002 1.3e-26 124.0 176 44.9
Sabra06G0132300 Salix brachista HOM05D010229 ORTHO05D012533 3.0e-26 122.9 145 51.7
Sabra11G0012300 Salix brachista HOM05D010229 ORTHO05D012533 4.2e-20 102.4 141 48.9
Sabra11G0012600 Salix brachista HOM05D010229 ORTHO05D012533 4.2e-20 102.4 141 48.9
Sabra01G0174000 Salix brachista HOM05D010229 ORTHO05D012533 1.0e-18 97.8 139 48.2
Sabra01G0176600 Salix brachista HOM05D010229 ORTHO05D012533 3.7e-16 89.4 145 40.7
Sabra01G0131100 Salix brachista HOM05D010229 ORTHO05D012533 4.5e-14 82.4 159 37.7
Sabra18G0040900 Salix brachista HOM05D000012 ORTHO05D012533 1.9e-12 77.0 59 66.1
FvH4_4g33448 Fragaria vesca HOM05D000004 ORTHO05D000002 4.2e-12 75.9 173 30.6
TWI59G0882 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.9e-11 71.6 236 25.4
Sabra19G0010300 Salix brachista HOM05D010229 ORTHO05D012533 1.8e-10 70.5 67 56.7
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 2.3e-10 70.1 264 23.9
Atru.chr1.2265 Acer truncatum HOM05D000004 ORTHO05D000002 5.1e-10 68.9 275 24.4
Dinv07775 Davidia involucrata HOM05D000004 ORTHO05D000002 8.7e-10 68.2 246 24.8
Sabra15G0070300 Salix brachista HOM05D000004 ORTHO05D000002 2.2e-08 63.5 246 27.6
Sabra01G0113300 Salix brachista HOM05D010229 ORTHO05D012533 4.8e-08 62.4 52 63.5
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 6.3e-08 62.0 261 25.3
Sabra16G0292300 Salix brachista HOM05D010229 ORTHO05D012533 1.1e-07 61.2 63 55.6
Sabra17G0030900 Salix brachista HOM05D001103 ORTHO05D000002 1.4e-07 60.8 244 26.6
Sabra11G0133300 Salix brachista HOM05D000004 ORTHO05D000002 2.4e-07 60.1 257 25.7
Rhsim02G0214500 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.1e-07 59.3 97 36.1
Rhsim10G0140700 Rhododendron simsii HOM05D002417 ORTHO05D002589 4.1e-07 59.3 97 36.1
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 5.3e-07 58.9 236 26.3
Rhsim05G0064200 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.3e-07 58.9 100 35.0
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 6.9e-07 58.5 251 25.5
TPR.G864 Trifolium pratense HOM05D008382 ORTHO05D000002 6.9e-07 58.5 156 28.8
Rhsim06G0164300 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.0e-07 58.2 97 35.1
EL10Ac1g00890 Beta vulgaris HOM05D008382 ORTHO05D000002 1.2e-06 57.8 227 25.1
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 1.5e-06 57.4 164 26.8
Rhsim08G0165700 Rhododendron simsii HOM05D011420 ORTHO05D019352 2.6e-06 56.6 97 35.1
Rhsim03G0207400 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.4e-06 56.2 97 34.0
Sabra16G0139900 Salix brachista HOM05D010229 ORTHO05D010643 3.4e-06 56.2 35 68.6
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 5.9e-06 55.5 229 24.5
EL10Ac3g06996 Beta vulgaris HOM05D008382 ORTHO05D000563 7.7e-06 55.1 103 35.9
Potri.003G026106 Populus trichocarpa HOM05D028484 ORTHO05D000002 7.7e-06 55.1 136 29.4
FvH4_3g27861 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-05 54.7 264 24.2
RhsimUnG0219200 Rhododendron simsii HOM05D061990 ORTHO05D013018 1.0e-05 54.7 127 29.9


User provided reference genes

Program Settings