Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0021300 Salix brachista HOM05D002385 ORTHO05D002245 2.8e-48 194.9 94 100.0
Sabra16G0021200 Salix brachista HOM05D002385 ORTHO05D002245 4.1e-15 84.7 59 69.5
Sabra16G0025900 Salix brachista HOM05D002385 ORTHO05D002245 4.1e-15 84.7 59 69.5
Manes.09G073500 Manihot esculenta HOM05D002385 ORTHO05D002245 6.9e-15 84.0 53 73.6
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 1.5e-14 82.8 58 70.7
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 5.9e-14 80.9 58 67.2
Sabra16G0021100 Salix brachista HOM05D002385 ORTHO05D002245 5.5e-12 74.3 66 57.6
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 1.6e-11 72.8 57 64.9
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 2.7e-11 72.0 57 64.9
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.0e-10 70.1 53 62.3
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 2.3e-10 68.9 56 60.7
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 2.3e-10 68.9 54 57.4
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 2.3e-10 68.9 54 57.4
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 2.3e-10 68.9 55 61.8
QL04p061357 Quercus lobata HOM05D002385 ORTHO05D002245 2.3e-10 68.9 57 63.2
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 3.9e-10 68.2 54 64.8
Eucgr.A00900 Eucalyptus grandis HOM05D002385 ORTHO05D002245 3.9e-10 68.2 57 57.9
Haze_13597 Corylus avellana HOM05D002385 ORTHO05D002245 5.1e-10 67.8 58 62.1
HanXRQChr11g0335361 Helianthus annuus HOM05D002385 ORTHO05D002245 1.1e-09 66.6 54 59.3
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 1.5e-09 66.2 50 68.0
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 1.5e-09 66.2 56 58.9
Cpa.g.sc7.104 Carica papaya HOM05D002385 ORTHO05D002245 2.0e-09 65.9 56 66.1
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.0e-09 65.9 35 82.9
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 2.0e-09 65.9 56 60.7
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 3.3e-09 65.1 54 55.6
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 4.3e-09 64.7 56 57.1
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 5.7e-09 64.3 56 58.9
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 5.7e-09 64.3 58 62.1
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 9.7e-09 63.5 58 58.6
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 9.7e-09 63.5 58 58.6
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 9.7e-09 63.5 58 58.6
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 1.3e-08 63.2 57 61.4
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.2e-08 62.4 56 57.1
VMungo0540G2222 Vigna mungo HOM05D002385 ORTHO05D002245 2.8e-08 62.0 50 60.0
Cfa023028 Carpinus fangiana HOM05D002385 ORTHO05D002245 3.7e-08 61.6 56 58.9
COL.COLO4_07164 Corchorus olitorius HOM05D002385 ORTHO05D002245 4.8e-08 61.2 55 58.2
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 4.8e-08 61.2 60 55.0
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 6.3e-08 60.8 49 65.3
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 1.1e-07 60.1 55 60.0
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 1.1e-07 60.1 55 60.0
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 1.1e-07 60.1 55 60.0
ClCG11G016780 Citrullus lanatus HOM05D002385 ORTHO05D002245 1.1e-07 60.1 58 56.9
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.4e-07 59.7 55 60.0
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.4e-07 58.9 40 72.5
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 2.4e-07 58.9 40 72.5
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 2.4e-07 58.9 40 72.5
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.4e-07 58.9 54 57.4
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 2.4e-07 58.9 57 56.1
GSVIVG01015788001 Vitis vinifera HOM05D002385 ORTHO05D002245 2.4e-07 58.9 38 68.4
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 2.4e-07 58.9 57 56.1
CsaV3_4G032300 Cucumis sativus L. HOM05D002385 ORTHO05D002245 3.1e-07 58.5 56 57.1
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 3.1e-07 58.5 65 50.8
GSVIVG01015780001 Vitis vinifera HOM05D002385 ORTHO05D002245 3.1e-07 58.5 46 60.9
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 4.1e-07 58.2 62 48.4
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 4.1e-07 58.2 55 58.2
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 4.1e-07 58.2 55 58.2
Glyma.13G003300 Glycine max HOM05D002385 ORTHO05D002245 4.1e-07 58.2 52 59.6
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 5.3e-07 57.8 55 58.2
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 5.3e-07 57.8 56 57.1
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 5.3e-07 57.8 56 57.1
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 5.3e-07 57.8 60 53.3
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 6.9e-07 57.4 64 48.4
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.2e-06 56.6 56 58.9
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 1.2e-06 56.6 63 47.6
Cfa023570 Carpinus fangiana HOM05D002385 ORTHO05D002245 1.5e-06 56.2 65 52.3
Haze_13594 Corylus avellana HOM05D002385 ORTHO05D002245 1.5e-06 56.2 42 66.7
Duzib133G1087 Durio zibethinus HOM05D002385 ORTHO05D002245 1.5e-06 56.2 64 51.6
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 1.5e-06 56.2 60 50.0
Sed0001434 Sechium edule HOM05D002385 ORTHO05D002245 1.5e-06 56.2 58 53.4
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 2.0e-06 55.8 55 58.2
Migut.M00099 Erythranthe guttata HOM05D002385 ORTHO05D002245 2.0e-06 55.8 58 53.4
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.0e-06 55.8 55 52.7
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 2.6e-06 55.5 55 56.4
Glyma.08G170800 Glycine max HOM05D002385 ORTHO05D002245 2.6e-06 55.5 50 52.0
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 2.6e-06 55.5 55 56.4
Sabra06G0015400 Salix brachista HOM05D002385 ORTHO05D002245 3.4e-06 55.1 53 58.5
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 4.5e-06 54.7 55 56.4
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 4.5e-06 54.7 54 55.6
Carub.0004s1352 Capsella rubella HOM05D002385 ORTHO05D002245 5.9e-06 54.3 57 52.6
MD09G1137600 Malus domestica HOM05D002385 ORTHO05D002245 5.9e-06 54.3 60 50.0
ECA240G4719 Erigeron canadensis HOM05D002385 ORTHO05D002245 7.7e-06 53.9 54 53.7
Prupe.3G187300 Prunus persica HOM05D002385 ORTHO05D002245 7.7e-06 53.9 58 53.4


User provided reference genes

Program Settings