Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 0.0e+00 1279.6 676 100.0
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 0.0e+00 1114.8 688 85.2
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.6e-281 971.8 686 75.9
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 2.2e-251 872.5 698 68.9
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.0e-213 747.3 709 59.4
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.0e-201 706.4 702 56.6
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.6e-184 647.9 699 53.9
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.3e-179 634.0 699 53.5
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 1.3e-176 624.0 710 52.1
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 3.9e-176 622.5 704 54.1
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 2.5e-175 619.8 691 53.0
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 1.4e-170 604.0 694 51.6
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.9e-168 595.9 698 52.0
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.3e-166 590.9 710 50.3
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 6.2e-166 588.6 711 52.3
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 2.4e-165 586.6 712 51.4
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 3.1e-165 586.3 724 50.0
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.9e-162 577.0 690 50.9
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 9.3e-162 574.7 693 50.5
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.6e-161 573.9 694 50.4
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 6.0e-161 572.0 716 48.9
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 7.9e-161 571.6 714 49.2
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 3.9e-160 569.3 699 49.8
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 3.9e-160 569.3 698 51.4
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 6.7e-160 568.5 707 50.2
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 6.7e-160 568.5 704 51.3
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 8.7e-160 568.2 703 49.9
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.3e-158 564.3 688 50.6
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.2e-156 557.8 682 51.2
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.0e-156 557.0 696 50.0
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 2.6e-156 556.6 682 50.0
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.8e-156 555.4 681 50.5
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 2.2e-155 553.5 705 50.6
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.2e-154 549.7 704 50.4
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 9.3e-154 548.1 642 51.4
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.8e-152 543.9 631 51.8
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.7e-152 542.0 708 49.3
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 3.3e-151 539.7 717 47.4
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.1e-150 537.0 698 48.3
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.1e-149 534.6 700 48.0
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 4.1e-149 532.7 696 47.6
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.2e-148 531.2 691 48.5
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.0e-147 525.8 704 46.7
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 8.4e-147 525.0 679 48.6
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.9e-146 523.9 716 46.6
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 5.7e-143 512.3 692 46.7
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 9.7e-143 511.5 700 47.0
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 2.8e-142 510.0 716 46.9
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 3.7e-142 509.6 694 46.7
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.3e-141 505.8 702 48.4
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 2.6e-140 503.4 754 45.2
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.5e-140 502.7 703 47.9
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 5.0e-139 499.2 700 47.6
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 1.9e-138 497.3 831 42.5
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.2e-138 496.5 710 47.5
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-137 494.6 713 43.9
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.8e-136 490.7 709 44.3
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.9e-136 489.6 704 47.3
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 3.9e-136 489.6 692 43.8
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 1.5e-135 487.6 621 49.9
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 5.7e-135 485.7 619 49.8
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 4.5e-132 476.1 716 43.2
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 8.5e-131 471.9 682 45.6
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.4e-130 471.1 706 43.6
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 7.2e-130 468.8 705 43.7
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.7e-129 466.8 779 41.8
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 7.9e-129 465.3 716 43.2
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.9e-128 463.0 703 43.4
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 2.6e-127 460.3 690 43.9
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.4e-127 459.5 692 42.9
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 5.7e-127 459.1 707 43.0
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 7.4e-127 458.8 706 43.3
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.2e-126 457.2 691 43.3
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 2.4e-125 453.8 682 43.3
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 2.6e-124 450.3 707 42.9
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.0e-123 448.4 691 43.0
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 5.0e-123 446.0 721 40.9
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.1e-122 444.9 709 43.0
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.7e-121 440.3 765 41.0
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 3.6e-121 439.9 695 42.6
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 4.7e-121 439.5 694 42.1
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 4.0e-120 436.4 697 42.3
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 7.5e-119 432.2 703 40.5
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 7.5e-119 432.2 734 43.3
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 4.1e-117 426.4 690 41.0
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.0e-117 425.6 552 50.4
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 7.0e-117 425.6 718 40.7
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 7.0e-117 425.6 697 40.9
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 9.1e-117 425.2 615 43.3
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 4.5e-116 422.9 763 38.8
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 4.5e-116 422.9 515 51.1
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.9e-116 422.5 691 41.2
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 2.9e-115 420.2 682 42.4
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 3.2e-114 416.8 692 42.1
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 8.0e-113 412.1 701 41.4
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.2e-111 408.3 659 42.3
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 6.3e-110 402.5 540 46.7
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 4.1e-109 399.8 697 39.3
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.0e-108 397.5 698 39.0
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 3.8e-107 393.3 687 40.8
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 6.5e-107 392.5 682 43.0
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.5e-106 391.3 667 40.8
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 2.5e-106 390.6 714 38.7
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 2.5e-106 390.6 698 40.1
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 2.1e-105 387.5 726 39.5
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 8.0e-105 385.6 625 42.1
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 2.3e-104 384.0 658 40.9
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.3e-104 384.0 777 35.4
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 5.2e-104 382.9 779 37.9
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 1.6e-100 371.3 658 40.1
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 7.7e-100 369.0 658 39.2
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.7e-99 367.9 717 36.7
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 3.3e-98 363.6 669 39.0
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 4.3e-98 363.2 675 38.7
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.8e-97 360.5 621 40.3
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 3.6e-97 360.1 657 38.8
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.8e-96 357.8 632 39.6
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 3.0e-96 357.1 661 38.1
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.6e-95 354.0 659 38.2
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 7.5e-95 352.4 665 38.3
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 7.5e-95 352.4 665 38.5
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 9.8e-95 352.1 657 38.2
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 6.4e-94 349.4 689 38.3
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.1e-93 348.6 656 37.0
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.1e-93 348.6 688 34.9
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 1.4e-93 348.2 866 36.7
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.4e-93 348.2 685 37.1
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 5.4e-93 346.3 688 37.6
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.2e-89 335.1 586 40.3
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 2.1e-89 334.3 678 36.6
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.1e-89 334.3 658 37.8
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 4.0e-88 330.1 660 37.9
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 5.2e-88 329.7 292 60.3
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.2e-86 324.3 687 38.4
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.4e-85 320.9 626 36.9
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.2e-85 320.5 339 55.8
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.1e-80 303.9 690 34.5
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 8.3e-78 295.8 361 47.1
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.2e-76 292.0 336 51.2
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 1.0e-75 288.9 565 39.5
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.3e-75 288.5 567 38.8
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.1e-73 281.2 532 35.9
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.2e-71 275.4 345 47.5
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.7e-70 271.6 604 34.8
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.9e-69 268.1 292 53.1
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.4e-69 267.7 302 48.7
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.0e-67 260.8 276 52.9
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 7.6e-63 246.1 300 49.3
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.2e-60 238.8 686 32.5
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.7e-59 235.0 284 50.4
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 5.6e-58 229.9 308 44.2
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.3e-57 228.8 242 49.2
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 2.7e-52 211.1 489 36.6
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 9.9e-47 192.6 431 38.7
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 5.6e-42 176.8 139 65.5
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 9.0e-40 169.5 143 60.8
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.3e-38 165.6 198 52.0
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.1e-34 152.5 374 34.2
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 2.1e-33 148.3 156 57.1
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.8e-30 137.5 473 31.5
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 5.7e-26 123.6 209 40.2
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 7.4e-26 123.2 723 27.1
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.3e-25 122.5 418 27.8
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 8.2e-25 119.8 113 57.5
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.4e-24 118.2 452 30.3
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.2e-23 115.9 128 52.3
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.2e-23 115.9 166 45.8
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.0e-22 112.8 428 27.6
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.2e-14 85.1 109 46.8
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.6e-12 79.0 356 29.5
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.6e-12 77.8 264 32.6
FAN06G0571 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.7e-12 77.4 91 49.5
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.4e-10 70.9 45 73.3
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 4.1e-08 64.3 68 48.5
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 1.6e-07 62.4 177 32.2
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 2.0e-07 62.0 154 33.8
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.0e-07 62.0 55 60.0
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.6e-07 61.6 112 37.5
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 8.5e-06 56.6 57 56.1


User provided reference genes

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