Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 7.7e-135 483.8 241 100.0
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.3e-126 456.4 241 93.8
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.7e-110 402.9 239 82.8
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 2.6e-106 389.0 238 80.3
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 2.9e-105 385.6 249 78.3
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.9e-105 384.8 238 80.7
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 4.9e-105 384.8 245 78.4
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 6.4e-105 384.4 246 76.8
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.1e-104 383.6 239 79.5
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.8e-104 382.9 249 77.9
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 2.4e-104 382.5 236 80.1
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 4.1e-104 381.7 244 77.9
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 5.4e-104 381.3 237 80.2
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 7.0e-104 380.9 241 78.0
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.6e-103 379.8 240 79.6
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.7e-103 379.0 239 79.1
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 3.5e-103 378.6 237 78.9
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 4.6e-103 378.3 249 76.7
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 4.6e-103 378.3 236 79.7
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.0e-102 377.1 249 77.1
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.0e-102 377.1 239 78.2
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.3e-102 375.9 253 76.7
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 5.0e-102 374.8 238 77.7
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.6e-102 374.0 253 76.3
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.1e-101 373.6 251 74.5
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.9e-101 372.9 246 76.0
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.3e-101 371.7 249 75.9
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.3e-101 371.7 239 77.8
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 9.5e-101 370.5 242 76.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 2.1e-100 369.4 240 74.6
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 8.0e-100 367.5 235 77.0
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.4e-99 366.7 237 77.6
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 2.3e-99 365.9 239 75.3
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.1e-99 365.5 234 75.6
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 8.9e-99 364.0 221 79.6
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 1.5e-98 363.2 244 73.8
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.6e-98 362.5 232 75.0
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 2.6e-98 362.5 231 77.1
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 5.8e-98 361.3 225 77.3
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 9.8e-98 360.5 244 74.2
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 2.9e-97 359.0 225 77.8
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 3.7e-97 358.6 241 74.7
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 3.7e-97 358.6 236 76.7
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 1.1e-96 357.1 239 73.2
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.4e-96 356.7 228 78.1
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.9e-96 356.3 236 73.3
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.9e-96 356.3 230 76.1
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 7.0e-96 354.4 244 71.7
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 9.2e-96 354.0 236 73.3
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 3.5e-95 352.1 243 72.8
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.6e-95 351.7 242 71.9
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 6.0e-95 351.3 235 74.0
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.8e-95 350.9 242 71.9
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.3e-94 350.1 218 78.9
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.3e-94 350.1 232 74.1
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 1.3e-94 350.1 235 73.6
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 3.0e-94 349.0 239 73.2
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 8.6e-94 347.4 240 72.1
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.5e-93 346.7 230 74.3
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.5e-93 346.7 237 73.0
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.9e-93 346.3 241 72.6
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.3e-93 345.5 231 74.5
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 9.5e-93 344.0 225 75.6
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.2e-92 343.6 304 60.5
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 2.1e-92 342.8 218 77.5
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.1e-92 342.8 242 70.7
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.4e-91 340.1 226 74.8
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.8e-91 339.7 231 72.3
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.8e-91 339.7 243 71.6
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 4.0e-91 338.6 241 71.4
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 6.8e-91 337.8 228 73.2
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 1.2e-90 337.0 231 71.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.2e-90 337.0 236 71.2
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.0e-90 336.3 244 67.2
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 7.5e-90 334.3 199 81.4
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.2e-89 332.8 246 70.3
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 2.2e-89 332.8 232 72.0
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.2e-89 332.8 211 75.8
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.2e-89 332.8 230 71.7
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 8.3e-89 330.9 233 69.5
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 8.3e-89 330.9 228 72.8
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 5.4e-88 328.2 234 70.5
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 5.4e-88 328.2 234 70.5
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 5.4e-88 328.2 240 70.0
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 7.1e-88 327.8 195 80.0
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.2e-87 327.0 233 70.4
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 2.7e-87 325.9 227 71.4
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 6.0e-87 324.7 236 69.1
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 6.0e-87 324.7 236 69.1
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 7.8e-87 324.3 276 68.8
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.7e-86 323.2 239 66.5
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 5.1e-86 321.6 207 77.3
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.1e-85 320.5 235 68.5
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.9e-85 319.7 237 67.1
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 2.5e-85 319.3 208 76.0
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 4.3e-85 318.5 195 79.0
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.8e-84 315.8 220 65.9
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.2e-81 306.2 204 74.5
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 8.4e-81 304.3 218 68.3
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.2e-79 300.4 228 64.9
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.1e-77 293.9 199 72.9
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 1.9e-77 293.1 189 75.7
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 3.3e-77 292.4 238 60.5
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 7.3e-77 291.2 240 63.8
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.3e-73 280.4 198 73.7
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 4.9e-73 278.5 194 68.0
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 5.4e-72 275.0 189 72.0
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.1e-71 273.1 202 68.8
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.1e-64 248.1 142 81.7
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 3.5e-63 245.7 240 53.8
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 1.7e-62 243.4 220 53.6
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 7.6e-58 228.0 206 57.8
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 8.4e-57 224.6 141 77.3
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.1e-56 224.2 193 59.6
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 4.2e-56 222.2 241 49.4
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 9.3e-56 221.1 186 59.7
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.8e-52 209.5 128 78.9
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 7.7e-34 148.3 184 45.1
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.4e-26 122.9 89 68.5
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.9e-25 119.8 279 32.3
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 6.5e-25 118.6 208 35.6
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 3.9e-22 109.4 184 39.1
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.7e-20 104.0 165 39.4
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.8e-14 84.0 49 79.6
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.2e-13 81.3 49 77.6
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 2.0e-13 80.5 61 65.6
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.2e-07 61.2 34 76.5
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 3.0e-06 56.6 252 28.6


User provided reference genes

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