Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 0.0e+00 1421.4 738 100.0
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 0.0e+00 1229.5 739 88.4
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 2.2e-302 1042.0 740 76.4
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 1.6e-276 956.1 720 73.2
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 3.8e-209 732.3 736 60.7
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 1.2e-178 630.9 778 53.7
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 8.3e-164 581.6 771 52.1
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 5.2e-158 562.4 766 49.3
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 2.4e-147 526.9 737 48.8
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 4.6e-146 522.7 745 50.2
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 9.5e-144 515.0 652 53.4
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 2.1e-143 513.8 782 48.2
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 1.1e-142 511.5 797 48.7
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 6.4e-140 502.3 737 47.6
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 2.4e-134 483.8 769 47.5
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 6.4e-132 475.7 717 46.4
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.9e-131 474.2 637 49.8
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 1.9e-128 464.2 750 44.1
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 5.4e-123 446.0 757 44.4
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 2.5e-120 437.2 764 43.1
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 5.3e-118 429.5 738 46.7
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 2.0e-117 427.6 731 46.1
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 4.9e-116 422.9 751 45.7
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 8.4e-116 422.2 735 44.8
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.2e-115 419.9 735 44.4
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.2e-115 419.9 740 44.7
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 4.6e-114 416.4 734 44.3
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 5.1e-113 412.9 802 42.0
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.1e-112 411.8 734 44.0
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.5e-112 410.6 734 43.9
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 7.4e-112 409.1 775 42.5
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 4.8e-111 406.4 790 41.9
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.4e-110 404.8 742 45.6
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 2.6e-109 400.6 723 43.2
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 1.7e-108 397.9 736 44.4
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 3.5e-106 390.2 737 42.3
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 6.0e-106 389.4 777 41.4
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 6.7e-105 386.0 717 43.2
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.5e-104 384.8 761 41.3
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 7.4e-104 382.5 766 41.1
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 9.7e-104 382.1 762 40.9
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 1.6e-103 381.3 777 42.5
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 2.4e-102 377.5 789 40.9
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 2.4e-102 377.5 835 38.9
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 1.0e-100 372.1 781 42.0
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 2.2e-100 370.9 777 39.4
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 6.5e-100 369.4 787 38.5
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.1e-99 368.6 793 40.7
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 1.1e-99 368.6 716 39.8
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.4e-99 368.2 841 37.0
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 1.0e-97 362.1 740 43.5
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 2.3e-97 360.9 769 40.7
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 3.3e-96 357.1 757 41.0
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 1.3e-95 355.1 735 40.7
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.2e-95 354.4 792 38.9
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 2.8e-95 354.0 638 44.0
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 4.8e-95 353.2 524 50.8
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 1.8e-94 351.3 754 39.4
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 2.4e-94 350.9 730 42.3
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 6.9e-94 349.4 744 40.7
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 2.6e-93 347.4 757 39.6
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 5.9e-93 346.3 752 40.6
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.9e-93 346.3 779 38.3
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 7.7e-93 345.9 700 39.9
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 7.7e-93 345.9 765 40.7
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 6.5e-92 342.8 727 42.5
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.4e-91 341.7 794 37.8
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 9.4e-91 339.0 799 39.7
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 9.4e-91 339.0 753 39.3
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 3.7e-87 327.0 775 39.7
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 8.2e-87 325.9 747 40.2
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 3.1e-86 323.9 797 38.9
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 2.2e-84 317.8 746 38.2
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 2.9e-84 317.4 724 37.7
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.1e-83 315.5 737 37.7
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 1.6e-82 311.6 720 38.1
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 2.1e-82 311.2 734 37.1
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 2.7e-82 310.8 777 36.7
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.7e-82 310.8 734 37.9
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 1.0e-81 308.9 721 38.3
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 2.3e-81 307.8 725 37.5
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 3.9e-81 307.0 729 36.9
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 3.9e-81 307.0 743 38.8
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 6.7e-81 306.2 796 37.4
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 4.4e-80 303.5 735 37.8
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 2.2e-79 301.2 712 35.8
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 3.7e-79 300.4 747 38.4
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 9.1e-78 295.8 777 37.6
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 3.8e-76 290.4 726 37.1
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.5e-75 288.5 743 36.1
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 2.1e-74 284.6 730 37.4
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.0e-73 282.3 744 36.6
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.8e-73 281.6 736 37.1
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 4.0e-73 280.4 738 36.3
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 6.7e-73 279.6 666 36.6
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 1.7e-71 275.0 750 35.6
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.0e-68 265.8 651 37.9
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 2.9e-68 264.2 635 38.0
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 5.0e-68 263.5 747 34.0
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 6.5e-68 263.1 733 35.3
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 1.1e-67 262.3 651 36.6
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 5.5e-67 260.0 693 36.5
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 5.5e-67 260.0 776 35.3
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 3.6e-66 257.3 738 35.9
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 1.0e-65 255.8 496 45.4
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 1.5e-64 251.9 719 35.9
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 7.5e-64 249.6 725 33.1
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 4.8e-63 246.9 705 36.5
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 2.7e-61 241.1 692 34.7
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.0e-60 239.2 794 31.2
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 2.3e-60 238.0 736 34.1
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.4e-57 228.8 787 30.6
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 5.2e-57 226.9 749 33.2
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.0e-52 212.6 685 32.0
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 2.9e-52 211.1 765 31.1
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 4.3e-51 207.2 702 32.5
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 8.0e-50 203.0 729 32.5
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.4e-49 202.2 735 32.2
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.3e-47 195.7 728 32.0
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 8.3e-47 193.0 729 31.4
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 6.0e-45 186.8 728 32.7
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 2.3e-44 184.9 279 52.3
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 3.0e-44 184.5 725 31.6
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 4.3e-43 180.6 727 30.0
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 3.6e-42 177.6 707 29.8
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 3.4e-40 171.0 692 30.8
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 2.4e-38 164.9 775 29.9
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.4e-38 164.9 722 31.0
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 9.2e-38 162.9 797 27.0
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 9.2e-38 162.9 727 30.9
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 1.2e-34 152.5 606 31.8
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 3.6e-34 151.0 312 39.1
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.1e-33 149.4 554 31.4
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 1.5e-32 145.6 170 51.2
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 9.9e-32 142.9 492 30.9
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.7e-31 142.1 331 34.4
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 4.9e-31 140.6 492 30.7
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 1.4e-30 139.0 190 56.3
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 7.3e-27 126.7 518 31.1
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 7.3e-27 126.7 267 40.8
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 9.5e-27 126.3 561 30.7
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 2.1e-26 125.2 494 30.6
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 2.8e-26 124.8 811 27.4
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 6.2e-26 123.6 401 32.9
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 6.2e-26 123.6 401 32.9
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 1.4e-25 122.5 449 31.4
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 2.0e-24 118.6 449 31.4
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 7.6e-24 116.7 436 29.1
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 1.7e-23 115.5 301 35.9
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 2.2e-23 115.2 449 31.2
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 3.2e-22 111.3 243 36.6
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 5.4e-22 110.5 183 41.5
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 7.1e-22 110.2 294 39.5
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 8.7e-20 103.2 417 31.4
Lalb_Chr19g0131131 Lupinus albus HOM05D003765 ORTHO05D004561 2.6e-16 91.7 206 37.9
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 2.6e-16 91.7 184 29.9
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 3.4e-16 91.3 350 31.1
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 9.9e-16 89.7 357 31.7
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 1.3e-15 89.4 315 32.7
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 2.2e-15 88.6 314 32.8
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.9e-15 88.2 414 29.0
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 1.4e-14 85.9 347 30.8
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 4.2e-14 84.3 226 33.2
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 4.2e-14 84.3 111 55.9
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 5.4e-14 84.0 373 30.0
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 9.3e-14 83.2 350 30.0
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 9.3e-14 83.2 350 30.0
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 2.1e-13 82.0 658 25.5
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 2.1e-13 82.0 110 53.6
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 6.0e-13 80.5 385 29.9
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 5.1e-12 77.4 356 28.1
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 3.6e-10 71.2 737 22.8
SEGI_23141 Sequoiadendron giganteum HOM05D002769 ORTHO05D001913 1.1e-09 69.7 172 27.9
AagrBONN_evm.TU.Sc2ySwM_228.4044 Anthoceros agrestis HOM05D002515 ORTHO05D005796 6.9e-09 67.0 190 26.3
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 9.0e-09 66.6 171 32.2
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 2.0e-08 65.5 737 22.8
Mapoly0001s0174 Marchantia polymorpha HOM05D002515 ORTHO05D002722 3.4e-08 64.7 217 29.0
Duzib205G0479 Durio zibethinus HOM05D003765 ORTHO05D004561 4.5e-08 64.3 100 45.0
Mapoly0151s0019 Marchantia polymorpha HOM05D002515 ORTHO05D002722 1.4e-06 59.3 252 24.2
SEGI_41162 Sequoiadendron giganteum HOM05D001693 ORTHO05D001588 1.9e-06 58.9 203 26.1
Lsat_1_v5_gn_4_172021 Lactuca sativa HOM05D001693 ORTHO05D001588 4.2e-06 57.8 186 28.5
ATR0759G019 Amborella trichopoda HOM05D002769 ORTHO05D001913 9.3e-06 56.6 178 27.0
Thecc.09G322100 Theobroma cacao HOM05D002515 ORTHO05D002722 9.3e-06 56.6 175 28.0


User provided reference genes

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