Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.0e-130 469.9 217 100.0
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.7e-120 436.0 218 92.7
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 7.2e-100 367.5 222 77.9
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 3.4e-97 358.6 231 72.7
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 2.7e-94 349.0 218 74.3
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.7e-94 347.4 227 69.6
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.7e-94 347.4 227 69.6
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.0e-93 347.1 231 71.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.3e-93 346.7 226 73.5
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 2.9e-93 345.5 225 72.0
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 8.6e-93 344.0 225 71.6
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 8.6e-93 344.0 218 73.9
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.1e-92 343.6 228 66.7
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.5e-92 343.2 225 70.7
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 2.5e-92 342.4 228 68.0
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.3e-92 342.0 229 70.7
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 7.3e-92 340.9 220 69.5
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 7.3e-92 340.9 222 71.6
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 9.5e-92 340.5 216 71.3
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.2e-91 340.1 234 70.5
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 3.6e-91 338.6 219 72.1
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 3.6e-91 338.6 225 70.2
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 3.6e-91 338.6 231 68.0
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 4.7e-91 338.2 225 70.2
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.7e-91 338.2 232 66.4
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 6.1e-91 337.8 229 67.2
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 6.1e-91 337.8 230 68.3
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 6.1e-91 337.8 231 68.8
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.4e-90 336.7 229 66.8
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.8e-90 336.3 229 66.8
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.0e-90 335.5 222 72.1
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 4.0e-90 335.1 222 69.4
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 4.0e-90 335.1 227 67.8
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 4.0e-90 335.1 227 67.8
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 5.2e-90 334.7 222 69.4
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 8.9e-90 334.0 221 70.1
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 1.5e-89 333.2 228 67.1
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 2.0e-89 332.8 230 67.0
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 2.0e-89 332.8 232 69.4
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 3.4e-89 332.0 221 71.5
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 4.4e-89 331.6 230 69.1
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.7e-88 329.7 222 69.4
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 2.9e-88 328.9 235 65.1
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 3.7e-88 328.6 215 70.7
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.7e-88 328.6 226 67.7
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 4.9e-88 328.2 225 68.9
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 4.9e-88 328.2 215 70.7
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 6.4e-88 327.8 227 67.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 8.3e-88 327.4 233 68.7
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.1e-87 327.0 222 66.7
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.4e-87 326.6 241 66.0
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 2.4e-87 325.9 225 66.7
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 4.1e-87 325.1 221 66.5
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 9.2e-87 323.9 216 66.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 5.9e-86 321.2 228 63.2
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 5.9e-86 321.2 223 66.4
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 5.9e-86 321.2 225 66.7
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 1.3e-85 320.1 219 67.1
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 2.3e-85 319.3 225 67.6
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 3.0e-85 318.9 221 67.0
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 3.0e-85 318.9 235 66.0
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.9e-85 318.5 226 66.4
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 6.6e-85 317.8 232 64.2
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 6.6e-85 317.8 227 64.8
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.5e-84 315.8 267 58.1
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 3.3e-84 315.5 232 63.4
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 5.6e-84 314.7 228 64.0
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.8e-83 312.4 235 63.8
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 4.7e-83 311.6 238 63.0
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 4.7e-83 311.6 223 65.0
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 4.7e-83 311.6 223 65.0
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 8.0e-83 310.8 187 78.1
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 1.2e-81 307.0 222 64.9
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.6e-81 305.8 298 51.7
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 3.4e-81 305.4 231 63.6
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 9.2e-79 297.4 219 62.1
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 9.2e-79 297.4 195 72.8
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 3.5e-78 295.4 214 63.1
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.0e-77 291.6 192 69.3
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.9e-76 289.7 256 54.3
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.3e-76 288.9 193 67.9
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 5.6e-76 288.1 191 72.3
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.1e-74 283.9 233 55.4
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 5.8e-73 278.1 221 57.9
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.3e-72 276.9 199 66.3
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 4.9e-72 275.0 192 64.6
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 6.4e-72 274.6 191 68.6
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 8.3e-72 274.2 184 70.1
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.9e-71 273.1 194 65.5
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 7.1e-71 271.2 191 64.9
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.6e-70 270.0 197 66.0
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.1e-70 269.6 227 60.4
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 3.0e-69 265.8 193 65.3
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 3.0e-69 265.8 193 65.3
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 2.5e-68 262.7 191 64.9
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 4.3e-68 261.9 183 64.5
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 7.3e-68 261.2 183 65.6
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 9.5e-68 260.8 199 61.3
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 2.1e-67 259.6 183 65.0
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.5e-65 253.4 213 57.3
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 7.6e-65 251.1 203 62.1
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 9.9e-65 250.8 228 57.0
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 9.9e-65 250.8 184 60.9
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 1.3e-64 250.4 189 61.9
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 6.4e-64 248.1 191 59.2
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.2e-62 243.8 223 57.0
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.7e-62 242.7 222 55.0
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.7e-62 242.7 222 55.0
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 4.3e-60 235.3 193 58.0
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 1.1e-55 220.7 200 52.5
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 2.8e-51 206.1 164 61.0
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 3.6e-51 205.7 215 46.0
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 2.0e-49 199.9 137 66.4
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.3e-43 180.6 133 60.2
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 7.4e-36 154.8 85 71.8
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.9e-31 140.2 73 72.6
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 6.9e-18 95.1 180 34.4
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 1.6e-06 57.4 84 34.5
CARHR264550 Cardamine hirsuta HOM05D006795 ORTHO05D008573 7.9e-06 55.1 31 71.0


User provided reference genes

Program Settings