Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0138900 Salix brachista HOM05D000415 ORTHO05D002707 4.0e-41 171.0 88 100.0
Sabra15G0138800 Salix brachista HOM05D000415 ORTHO05D002707 2.1e-13 79.0 114 50.0
Potri.015G122800 Populus trichocarpa HOM05D000415 ORTHO05D002707 1.0e-12 76.6 114 48.2
Potri.015G123600 Populus trichocarpa HOM05D000415 ORTHO05D002707 1.4e-12 76.3 114 47.4
Potri.015G123200 Populus trichocarpa HOM05D000415 ORTHO05D002707 4.8e-10 67.8 114 45.6
QL11p016848 Quercus lobata HOM05D000415 ORTHO05D002707 1.1e-09 66.6 37 86.5
QL11p017354 Quercus lobata HOM05D000415 ORTHO05D002707 1.1e-09 66.6 37 86.5
VMungo0251G1123 Vigna mungo HOM05D000415 ORTHO05D002707 1.1e-09 66.6 114 39.5
PGR004G2346 Punica granatum HOM05D000415 ORTHO05D002707 1.4e-09 66.2 38 89.5
Cpa.g.sc30.160 Carica papaya HOM05D000415 ORTHO05D002707 4.1e-09 64.7 111 43.2
Manes.03G070700 Manihot esculenta HOM05D000415 ORTHO05D002707 4.1e-09 64.7 118 41.5
Cfa000705 Carpinus fangiana HOM05D000415 ORTHO05D002707 5.3e-09 64.3 114 43.0
Medtr4g084130 Medicago truncatula HOM05D000415 ORTHO05D002707 5.3e-09 64.3 38 81.6
Glyma.20G019400 Glycine max HOM05D000415 ORTHO05D002707 6.9e-09 63.9 114 42.1
Solyc02g068730.3 Solanum lycopersicum HOM05D000415 ORTHO05D002707 9.1e-09 63.5 38 78.9
Thecc.02G008900 Theobroma cacao HOM05D000415 ORTHO05D002707 9.1e-09 63.5 116 40.5
Duzib132G0202 Durio zibethinus HOM05D000415 ORTHO05D002707 2.0e-08 62.4 38 78.9
Lalb_Chr16g0385191 Lupinus albus HOM05D000415 ORTHO05D002707 2.0e-08 62.4 114 40.4
MBI18_g11483_MAGBIO Magnolia biondii HOM05D000415 ORTHO05D002707 2.0e-08 62.4 111 40.5
Eucgr.D00059 Eucalyptus grandis HOM05D000415 ORTHO05D002707 2.6e-08 62.0 38 81.6
Nn7g38249 Nelumbo nucifera HOM05D000415 ORTHO05D002707 2.6e-08 62.0 111 39.6
TPR.G20989 Trifolium pratense HOM05D000415 ORTHO05D002707 2.6e-08 62.0 38 76.3
TWI38G2032 Tripterygium wilfordii HOM05D000415 ORTHO05D002707 2.6e-08 62.0 111 40.5
EL10Ac6g13892 Beta vulgaris HOM05D000415 ORTHO05D002707 3.4e-08 61.6 38 76.3
QL06p040140 Quercus lobata HOM05D000415 ORTHO05D018187 3.4e-08 61.6 37 81.1
CSS0025426 Camellia sinensis var. sinensis HOM05D000415 ORTHO05D002707 4.5e-08 61.2 38 76.3
Gohir.A12G046600 Gossypium hirsutum HOM05D000415 ORTHO05D002707 4.5e-08 61.2 118 39.0
Gorai.008G048200 Gossypium raimondii HOM05D000415 ORTHO05D002707 4.5e-08 61.2 118 39.0
QL03p033275 Quercus lobata HOM05D000415 ORTHO05D018187 4.5e-08 61.2 37 81.1
Aa31LG9G16110 Aethionema arabicum HOM05D000415 ORTHO05D002707 5.9e-08 60.8 35 85.7
AL6G30180 Arabidopsis lyrata HOM05D000415 ORTHO05D002707 5.9e-08 60.8 35 85.7
Carub.0006s1714 Capsella rubella HOM05D000415 ORTHO05D002707 5.9e-08 60.8 35 85.7
CARHR194180 Cardamine hirsuta HOM05D000415 ORTHO05D002707 5.9e-08 60.8 35 85.7
CiPaw.09G076700 Carya illinoinensis HOM05D000415 ORTHO05D002707 5.9e-08 60.8 38 76.3
Thhalv10013085m.g Eutrema salsugineum HOM05D000415 ORTHO05D002707 5.9e-08 60.8 35 85.7
Sp6g25550 Schrenkiella parvula HOM05D000415 ORTHO05D002707 5.9e-08 60.8 35 85.7
AT5G18820 Arabidopsis thaliana HOM05D000415 ORTHO05D002707 7.7e-08 60.5 35 82.9
A02p05100 Brassica napus HOM05D000415 ORTHO05D002707 7.7e-08 60.5 35 85.7
C02p10150 Brassica napus HOM05D000415 ORTHO05D002707 7.7e-08 60.5 35 85.7
BolC2t06917H Brassica oleracea HOM05D000415 ORTHO05D002707 7.7e-08 60.5 35 85.7
BraA02t05470Z Brassica rapa HOM05D000415 ORTHO05D002707 7.7e-08 60.5 35 85.7
Glyma.07G221100 Glycine max HOM05D000415 ORTHO05D002707 7.7e-08 60.5 114 42.1
Gohir.D12G045600 Gossypium hirsutum HOM05D000415 ORTHO05D002707 7.7e-08 60.5 118 39.0
MD08G1228200 Malus domestica HOM05D000415 ORTHO05D002707 7.7e-08 60.5 37 81.1
Prupe.4G112900 Prunus persica HOM05D000415 ORTHO05D002707 7.7e-08 60.5 113 40.7
Nitab4.5_0007745g0020 Nicotiana tabacum HOM05D000415 ORTHO05D002707 1.0e-07 60.1 38 73.7
Sopen02g017900 Solanum pennellii HOM05D000415 ORTHO05D002707 1.0e-07 60.1 38 73.7
HanXRQChr15g0483731 Helianthus annuus HOM05D000415 ORTHO05D002707 1.3e-07 59.7 38 78.9
Lj4g0017078 Lotus japonicus HOM05D000415 ORTHO05D002707 1.3e-07 59.7 111 40.5
MD15G1422100 Malus domestica HOM05D000415 ORTHO05D002707 1.3e-07 59.7 37 81.1
Phvul.002G097700 Phaseolus vulgaris HOM05D000415 ORTHO05D002707 1.3e-07 59.7 114 39.5
PGSC0003DMG400010424 Solanum tuberosum HOM05D000415 ORTHO05D002707 1.3e-07 59.7 38 71.1
TAR633G1914 Trochodendron aralioides HOM05D000415 ORTHO05D002707 1.3e-07 59.7 38 76.3
Ah.03g136590 Amaranthus hybridus HOM05D000415 ORTHO05D002707 1.7e-07 59.3 38 71.1
AUR62017477 Chenopodium quinoa HOM05D000415 ORTHO05D002707 1.7e-07 59.3 38 71.1
AUR62037798 Chenopodium quinoa HOM05D000415 ORTHO05D002707 1.7e-07 59.3 38 71.1
GSVIVG01012098001 Vitis vinifera HOM05D000415 ORTHO05D002707 1.7e-07 59.3 114 41.2
COL.COLO4_17654 Corchorus olitorius HOM05D000415 ORTHO05D002707 2.2e-07 58.9 38 71.1
ClCG01G009550 Citrullus lanatus HOM05D000415 ORTHO05D002707 2.9e-07 58.5 111 36.9
arahy.Tifrunner.gnm1.ann1.KMC0BI Arachis hypogaea HOM05D000415 ORTHO05D002707 3.8e-07 58.2 114 39.5
CDE08G1067 Ceratophyllum demersum HOM05D000415 ORTHO05D002707 3.8e-07 58.2 38 76.3
CAN.G149.7 Capsicum annuum HOM05D000415 ORTHO05D002707 5.0e-07 57.8 38 71.1
Cc09_g06020 Coffea canephora HOM05D000415 ORTHO05D002707 5.0e-07 57.8 38 71.1
ECA238G3848 Erigeron canadensis HOM05D000415 ORTHO05D002707 5.0e-07 57.8 38 76.3
FvH4_3g12390 Fragaria vesca HOM05D000415 ORTHO05D002707 5.0e-07 57.8 38 78.9
FAN21G3731 Fragaria x ananassa HOM05D000415 ORTHO05D002707 5.0e-07 57.8 38 78.9
FAN25G1320 Fragaria x ananassa HOM05D000415 ORTHO05D002707 5.0e-07 57.8 38 78.9
Rhsim13G0129400 Rhododendron simsii HOM05D000415 ORTHO05D002707 5.0e-07 57.8 36 75.0
FAN16G2148 Fragaria x ananassa HOM05D000415 ORTHO05D002707 6.5e-07 57.4 118 39.8
THA.LOC104814358 Tarenaya hassleriana HOM05D000415 ORTHO05D002707 6.5e-07 57.4 35 80.0
FAN16G1361 Fragaria x ananassa HOM05D000415 ORTHO05D002707 8.5e-07 57.0 114 42.1
Peaxi162Scf00198g00069 Petunia axillaris HOM05D000415 ORTHO05D002707 8.5e-07 57.0 44 61.4
Migut.M01985 Erythranthe guttata HOM05D000415 ORTHO05D002707 1.1e-06 56.6 38 63.2
MELO3C021741.2 Cucumis melo HOM05D000415 ORTHO05D002707 1.4e-06 56.2 111 36.9
Lj2C350G16 Lonicera japonica HOM05D000415 ORTHO05D002707 1.9e-06 55.8 36 77.8
RcHm_v2.0_Chr5g0020251 Rosa chinensis HOM05D000415 ORTHO05D002707 1.9e-06 55.8 114 42.1
Actinidia22401 Actinidia chinensis HOM05D000415 ORTHO05D002707 2.5e-06 55.5 36 75.0
ATR0752G160 Amborella trichopoda HOM05D000415 ORTHO05D002707 2.5e-06 55.5 38 68.4
SGA_v2.0_scaffold298G47688 Striga asiatica HOM05D000415 ORTHO05D002707 2.5e-06 55.5 35 68.6
Atru.chr10.555 Acer truncatum HOM05D000415 ORTHO05D002707 3.2e-06 55.1 108 37.0
arahy.Tifrunner.gnm1.ann1.C485DN Arachis hypogaea HOM05D000415 ORTHO05D002707 3.2e-06 55.1 112 39.3
SEGI_07954 Sequoiadendron giganteum HOM05D000415 ORTHO05D016595 3.2e-06 55.1 36 66.7
Ciclev10014704m.g Citrus clementina HOM05D000415 ORTHO05D002707 4.2e-06 54.7 35 74.3
Lsat_1_v5_gn_2_63681 Lactuca sativa HOM05D000415 ORTHO05D002707 7.2e-06 53.9 38 71.1
Aqoxy1G01430 Aquilegia oxysepala HOM05D000415 ORTHO05D002707 9.4e-06 53.5 109 33.0


User provided reference genes

Program Settings