Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 1.9e-43 178.7 88 100.0
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 3.4e-40 167.9 84 97.6
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 4.2e-30 134.4 86 72.1
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 7.1e-30 133.7 79 79.7
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 7.1e-30 133.7 81 72.8
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.2e-29 132.9 83 72.3
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 1.2e-29 132.9 84 73.8
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 1.2e-29 132.9 84 75.0
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 6.0e-29 130.6 81 74.1
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 7.9e-29 130.2 80 72.5
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 7.9e-29 130.2 84 73.8
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 7.9e-29 130.2 81 70.4
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 1.3e-28 129.4 82 73.2
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 1.8e-28 129.0 87 67.8
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 3.0e-28 128.3 80 71.2
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 3.0e-28 128.3 83 69.9
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 3.0e-28 128.3 82 73.2
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 3.9e-28 127.9 84 70.2
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 3.9e-28 127.9 81 71.6
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 8.7e-28 126.7 81 71.6
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 8.7e-28 126.7 81 71.6
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 1.1e-27 126.3 79 69.6
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 1.9e-27 125.6 82 72.0
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 1.9e-27 125.6 83 68.7
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 2.5e-27 125.2 83 66.3
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 7.4e-27 123.6 80 66.2
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 7.4e-27 123.6 86 65.1
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 7.4e-27 123.6 81 71.6
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 9.6e-27 123.2 82 70.7
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 9.6e-27 123.2 84 65.5
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 9.6e-27 123.2 80 72.5
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 2.8e-26 121.7 84 65.5
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 3.7e-26 121.3 86 64.0
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 6.2e-26 120.6 78 69.2
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 6.2e-26 120.6 84 63.1
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 8.2e-26 120.2 81 66.7
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 1.1e-25 119.8 80 68.8
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 1.4e-25 119.4 79 69.6
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 1.8e-25 119.0 84 64.3
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 1.8e-25 119.0 79 65.8
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 2.4e-25 118.6 79 67.1
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 2.4e-25 118.6 84 61.9
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 3.1e-25 118.2 84 65.5
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 4.0e-25 117.9 81 64.2
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 4.0e-25 117.9 81 64.2
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 4.0e-25 117.9 85 62.4
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 4.0e-25 117.9 81 64.2
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 4.0e-25 117.9 85 62.4
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 4.0e-25 117.9 83 66.3
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 4.0e-25 117.9 81 61.7
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 5.3e-25 117.5 83 61.4
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 6.9e-25 117.1 73 74.0
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 6.9e-25 117.1 79 68.4
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 6.9e-25 117.1 85 65.9
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 9.0e-25 116.7 80 61.2
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 1.2e-24 116.3 83 63.9
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 1.2e-24 116.3 81 63.0
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 1.2e-24 116.3 79 65.8
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 2.2e-23 112.1 79 63.3
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 2.9e-23 111.7 73 67.1
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 2.5e-22 108.6 81 61.7
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 2.5e-22 108.6 82 63.4
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 5.5e-22 107.5 81 59.3
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 6.7e-20 100.5 71 67.6
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 1.1e-19 99.8 81 59.3
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 2.5e-19 98.6 82 57.3
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 7.4e-19 97.1 77 62.3
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 1.3e-18 96.3 82 57.3
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 3.7e-18 94.7 82 56.1
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 6.3e-18 94.0 81 55.6
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 1.2e-16 89.7 68 57.4
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 1.2e-13 79.7 51 68.6
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 6.7e-12 73.9 48 62.5
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 1.1e-09 66.6 82 40.2
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 1.1e-09 66.6 84 40.5
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 5.0e-07 57.8 79 36.7
FAN12G0891 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.9e-06 55.8 53 49.1
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.9e-06 55.8 53 49.1
FAN24G2461 Fragaria x ananassa HOM05D000188 ORTHO05D000362 4.2e-06 54.7 38 57.9
FAN03G3294 Fragaria x ananassa HOM05D004346 ORTHO05D005153 9.4e-06 53.5 38 57.9


User provided reference genes

Program Settings