Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.1e-98 363.2 176 100.0
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 3.2e-82 308.5 177 87.6
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.2e-65 253.4 171 72.5
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 8.0e-65 250.8 172 73.8
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 8.0e-65 250.8 178 71.9
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 5.7e-63 244.6 171 70.8
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 7.5e-63 244.2 157 75.2
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.4e-61 239.2 158 75.9
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 5.4e-61 238.0 149 77.2
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 7.0e-61 237.7 148 76.4
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.6e-60 236.5 172 71.5
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 5.9e-60 234.6 142 77.5
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.0e-59 233.8 181 63.5
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 1.0e-59 233.8 174 69.0
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.3e-59 233.4 161 70.8
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.7e-59 233.0 177 67.8
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 3.8e-59 231.9 180 66.1
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.1e-58 230.3 145 75.2
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.1e-58 230.3 169 68.6
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.1e-58 230.3 157 67.5
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 1.5e-58 229.9 173 66.5
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 2.5e-58 229.2 143 78.3
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 4.3e-58 228.4 178 66.9
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 5.6e-58 228.0 176 64.8
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 5.6e-58 228.0 168 69.0
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.2e-57 226.9 170 67.1
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.2e-57 226.9 168 67.3
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.2e-57 226.9 167 66.5
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.6e-57 226.5 172 65.1
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 2.8e-57 225.7 152 71.7
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.8e-57 225.7 152 71.1
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.8e-57 225.7 157 70.1
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 2.8e-57 225.7 157 72.0
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 3.6e-57 225.3 169 67.5
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 8.0e-57 224.2 178 64.6
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 8.0e-57 224.2 174 65.5
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 8.0e-57 224.2 175 65.1
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.0e-56 223.8 152 71.1
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 1.0e-56 223.8 152 71.1
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.0e-56 223.8 156 67.3
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.0e-56 223.8 180 64.4
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 1.4e-56 223.4 152 71.1
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.4e-56 223.4 139 77.0
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.8e-56 223.0 170 66.5
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 1.8e-56 223.0 151 72.8
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 1.8e-56 223.0 152 70.4
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 4.0e-56 221.9 141 75.9
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 8.9e-56 220.7 152 70.4
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 8.9e-56 220.7 139 76.3
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 8.9e-56 220.7 152 71.1
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.2e-55 220.3 127 80.3
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.5e-55 219.9 152 70.4
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 1.5e-55 219.9 152 70.4
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 2.0e-55 219.5 194 60.8
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 2.0e-55 219.5 176 61.4
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 2.0e-55 219.5 171 63.7
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 3.4e-55 218.8 137 74.5
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 3.4e-55 218.8 137 74.5
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 4.4e-55 218.4 173 63.6
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 4.4e-55 218.4 173 64.2
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 4.4e-55 218.4 173 64.2
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 9.8e-55 217.2 171 62.0
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.7e-54 216.5 176 61.4
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.2e-54 216.1 173 63.6
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 4.9e-54 214.9 153 69.3
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 1.8e-53 213.0 133 76.7
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 7.0e-53 211.1 120 82.5
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 1.0e-51 207.2 180 60.6
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.3e-51 206.8 195 55.9
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.7e-51 206.5 152 67.8
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 3.9e-51 205.3 112 80.4
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 5.0e-51 204.9 145 69.0
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 8.6e-51 204.1 118 75.4
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.1e-50 203.8 172 61.6
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 4.3e-50 201.8 149 63.1
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.6e-49 199.9 181 59.1
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 2.1e-49 199.5 130 73.8
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 4.7e-49 198.4 145 62.1
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 6.2e-49 198.0 107 80.4
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.5e-47 193.4 106 80.2
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 1.5e-47 193.4 130 71.5
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.2e-46 189.5 150 59.3
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.9e-45 186.4 131 70.2
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 2.7e-44 182.6 103 74.8
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 2.7e-44 182.6 126 64.3
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 6.0e-44 181.4 138 61.6
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.3e-43 180.3 197 49.7
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 5.2e-40 168.3 109 74.3
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.9e-37 159.8 92 71.7
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 2.7e-36 156.0 117 62.4
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.0e-35 154.1 127 63.0
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.0e-35 154.1 122 59.0
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.5e-34 149.4 123 57.7
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.6e-33 146.7 122 54.9
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 4.0e-32 142.1 89 67.4
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 3.8e-30 135.6 142 53.5
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 2.1e-28 129.8 127 52.0
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.3e-27 127.1 89 59.6
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 1.7e-27 126.7 145 44.8
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 3.9e-27 125.6 132 50.8
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.4e-24 116.3 117 50.4
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 3.1e-24 115.9 59 83.1
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 4.0e-24 115.5 68 73.5
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 6.0e-20 101.7 79 63.3
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 1.5e-18 97.1 89 48.3
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 1.6e-17 93.6 97 51.5
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.7e-06 57.0 41 56.1


User provided reference genes

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