Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.2e-91 339.7 165 100.0
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.6e-73 278.9 168 83.9
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 4.9e-72 274.6 166 83.7
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 2.9e-56 222.2 163 66.9
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.2e-54 216.9 157 66.2
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 4.6e-54 214.9 161 62.7
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 7.8e-54 214.2 157 65.0
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 3.0e-53 212.2 153 66.0
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 2.5e-52 209.1 142 64.1
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 3.3e-52 208.8 183 57.9
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 4.3e-52 208.4 157 61.8
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 4.3e-52 208.4 164 60.4
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 5.6e-52 208.0 163 59.5
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 2.1e-51 206.1 152 63.8
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 2.1e-51 206.1 144 66.0
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 2.8e-51 205.7 145 65.5
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.8e-51 205.7 145 65.5
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 6.2e-51 204.5 150 63.3
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 1.4e-50 203.4 152 60.5
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.4e-50 203.4 160 61.2
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.8e-50 203.0 150 62.0
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 6.8e-50 201.1 139 67.6
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 6.8e-50 201.1 160 60.6
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 1.5e-49 199.9 159 59.1
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 3.4e-49 198.7 144 62.5
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 4.4e-49 198.4 135 66.7
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 5.8e-49 198.0 152 59.2
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 5.8e-49 198.0 150 62.0
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 9.8e-49 197.2 141 64.5
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 4.9e-48 194.9 135 68.1
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 8.3e-48 194.1 154 59.1
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.1e-47 193.7 153 58.8
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.9e-47 193.0 143 63.6
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 4.1e-47 191.8 154 57.1
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 9.2e-47 190.7 138 61.6
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 1.6e-46 189.9 151 60.3
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 2.1e-46 189.5 149 59.1
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 2.7e-46 189.1 154 59.7
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 2.7e-46 189.1 124 71.0
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 2.7e-46 189.1 162 59.3
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 4.6e-46 188.3 135 64.4
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 4.6e-46 188.3 142 62.7
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 7.8e-46 187.6 134 64.9
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 7.8e-46 187.6 124 70.2
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 7.8e-46 187.6 151 59.6
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 7.8e-46 187.6 151 59.6
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.0e-45 187.2 154 57.1
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.7e-45 186.4 154 55.8
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 2.3e-45 186.0 157 56.1
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 3.9e-45 185.3 147 58.5
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.9e-45 185.3 154 56.5
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 3.9e-45 185.3 144 63.9
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 6.6e-45 184.5 154 56.5
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 1.9e-44 183.0 152 57.2
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 4.3e-44 181.8 157 56.1
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 5.6e-44 181.4 152 58.6
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 9.5e-44 180.6 136 60.3
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 9.5e-44 180.6 136 60.3
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 9.5e-44 180.6 158 55.1
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.1e-43 179.5 142 57.7
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 2.8e-43 179.1 142 57.7
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 3.6e-43 178.7 142 57.0
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 3.6e-43 178.7 142 57.0
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 8.1e-43 177.6 154 53.9
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.1e-42 177.2 154 53.9
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.1e-42 177.2 142 56.3
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.8e-42 176.4 138 58.0
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.8e-42 176.4 142 57.0
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.3e-42 176.0 128 63.3
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 3.1e-42 175.6 153 53.6
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 4.0e-42 175.3 153 53.6
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 6.8e-42 174.5 141 56.7
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 8.9e-42 174.1 129 61.2
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.5e-41 173.3 163 50.3
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 9.9e-41 170.6 143 55.9
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 2.9e-40 169.1 136 59.6
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.9e-40 169.1 134 59.0
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 4.9e-40 168.3 130 58.5
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 5.4e-39 164.9 151 53.6
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 2.1e-38 162.9 138 55.1
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 2.1e-38 162.9 134 54.5
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.7e-38 162.5 161 49.7
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 6.0e-38 161.4 131 57.3
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 1.7e-37 159.8 161 49.7
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.7e-37 159.8 140 52.9
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 3.0e-37 159.1 134 53.7
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.5e-36 156.8 141 53.9
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.5e-36 156.8 150 52.0
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 5.6e-36 154.8 137 48.2
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 7.3e-36 154.5 137 48.2
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 9.6e-36 154.1 111 65.8
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.1e-34 150.6 141 51.8
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 1.8e-34 149.8 112 63.4
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 2.4e-34 149.4 141 51.1
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 6.9e-34 147.9 127 51.2
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.2e-33 147.1 164 45.7
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 1.5e-33 146.7 130 56.2
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 9.3e-31 137.5 156 45.5
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 3.9e-29 132.1 113 56.6
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 2.5e-28 129.4 141 46.8
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 3.6e-27 125.6 160 41.2
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 3.1e-26 122.5 126 43.7
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 1.3e-24 117.1 93 60.2
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 6.4e-24 114.8 187 33.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 4.6e-22 108.6 140 38.6
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.8e-21 106.7 84 57.1
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.3e-20 102.1 79 54.4
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 1.8e-18 96.7 197 32.0
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 5.3e-18 95.1 65 64.6
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 1.9e-15 86.7 67 61.2
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.8e-13 80.1 129 34.9
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 1.8e-13 80.1 129 34.9
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 1.9e-12 76.6 138 32.6
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 7.4e-12 74.7 103 35.9
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.3e-11 73.9 77 46.8
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 2.4e-10 69.7 63 50.8
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 1.2e-09 67.4 130 33.1
Potri.015G119201 Populus trichocarpa HOM05D006750 ORTHO05D008426 5.5e-07 58.5 32 84.4


User provided reference genes

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