Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 1.7e-143 512.7 260 100.0
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 7.8e-101 370.9 206 94.7
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 8.7e-92 340.9 206 84.0
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 9.6e-83 310.8 201 80.6
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 2.6e-80 302.8 209 74.2
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 4.5e-80 302.0 201 74.6
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 2.2e-79 299.7 205 75.6
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 4.9e-79 298.5 207 72.9
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 6.5e-79 298.1 205 74.1
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 6.5e-79 298.1 203 75.4
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 3.2e-78 295.8 204 72.1
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 7.1e-78 294.7 204 72.1
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 1.6e-77 293.5 201 77.6
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 1.6e-77 293.5 206 74.8
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 2.1e-77 293.1 203 72.4
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 2.3e-76 289.7 202 72.3
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 3.9e-76 288.9 207 71.0
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 5.1e-76 288.5 211 73.0
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 8.7e-76 287.7 204 74.5
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 1.1e-75 287.3 203 73.4
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.5e-75 287.0 205 73.2
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 1.5e-75 287.0 206 71.8
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 4.3e-75 285.4 201 71.1
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 7.4e-75 284.6 207 75.8
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 4.8e-74 282.0 203 71.4
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 1.1e-73 280.8 216 68.5
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 2.4e-73 279.6 205 74.1
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 4.1e-73 278.9 207 71.0
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 5.3e-73 278.5 193 74.6
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 9.0e-73 277.7 207 70.0
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 1.2e-72 277.3 204 71.1
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 1.5e-72 276.9 209 69.4
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.5e-72 275.4 202 70.8
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 4.5e-72 275.4 217 67.7
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 5.9e-72 275.0 201 68.7
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 7.6e-72 274.6 226 66.8
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.0e-71 274.2 193 73.1
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 1.3e-71 273.9 197 70.6
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 2.2e-71 273.1 208 68.8
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 2.9e-71 272.7 203 69.5
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 3.8e-71 272.3 202 71.3
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 5.0e-71 271.9 208 66.3
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 8.5e-71 271.2 205 72.7
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 1.4e-70 270.4 202 69.3
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 1.4e-70 270.4 201 71.6
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 1.9e-70 270.0 203 69.0
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 2.5e-70 269.6 201 70.6
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 5.5e-70 268.5 201 71.6
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 7.2e-70 268.1 201 69.2
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 7.2e-70 268.1 205 67.8
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 1.6e-69 266.9 199 72.4
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 6.1e-69 265.0 197 72.1
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 6.1e-69 265.0 205 71.2
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 6.1e-69 265.0 187 76.5
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 7.9e-69 264.6 206 66.5
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 7.9e-69 264.6 208 67.3
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 1.0e-68 264.2 201 67.7
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 1.0e-68 264.2 202 71.8
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 1.8e-68 263.5 216 63.9
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 3.9e-68 262.3 203 67.5
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 8.7e-68 261.2 203 71.4
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 1.1e-67 260.8 185 75.7
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 1.5e-67 260.4 203 68.5
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 2.5e-67 259.6 203 68.0
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 4.3e-67 258.8 204 67.2
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 5.7e-67 258.5 194 70.6
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 7.4e-67 258.1 195 71.3
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 7.4e-67 258.1 184 72.8
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 9.7e-67 257.7 182 76.4
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 1.3e-66 257.3 201 66.7
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 1.3e-66 257.3 202 67.8
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 1.7e-66 256.9 209 67.9
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 8.2e-66 254.6 202 63.9
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 8.2e-66 254.6 195 70.8
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 1.4e-65 253.8 203 67.0
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 1.4e-65 253.8 204 66.7
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 1.4e-65 253.8 211 65.4
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 3.1e-65 252.7 195 70.3
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 4.1e-65 252.3 202 66.8
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 4.1e-65 252.3 198 69.2
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 4.1e-65 252.3 201 69.2
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 6.9e-65 251.5 195 69.7
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 1.2e-64 250.8 202 70.3
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 1.5e-64 250.4 207 68.6
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 1.5e-64 250.4 204 66.2
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 2.0e-64 250.0 192 70.8
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 4.5e-64 248.8 200 66.0
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 4.5e-64 248.8 200 66.0
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 4.5e-64 248.8 201 68.7
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 1.0e-63 247.7 203 66.5
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 1.0e-63 247.7 216 61.6
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 2.5e-62 243.0 216 62.5
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 5.5e-62 241.9 184 70.1
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 5.5e-62 241.9 197 67.5
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 3.6e-61 239.2 195 67.7
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.0e-60 237.7 193 70.5
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 3.9e-60 235.7 136 82.4
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.9e-60 235.7 136 82.4
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.4e-59 232.3 136 81.6
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 5.7e-59 231.9 140 78.6
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 4.1e-57 225.7 130 82.3
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 5.3e-57 225.3 129 82.2
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 9.1e-57 224.6 140 77.9
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 1.5e-56 223.8 208 60.1
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 2.6e-56 223.0 155 69.7
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 2.6e-56 223.0 198 63.6
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 3.8e-55 219.2 205 62.4
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 6.5e-55 218.4 201 63.7
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 3.2e-54 216.1 130 76.9
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 1.6e-53 213.8 192 64.1
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 7.9e-53 211.5 178 62.9
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 4.8e-50 202.2 107 86.9
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 4.8e-50 202.2 151 70.9
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 5.3e-49 198.7 116 78.4
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 5.3e-49 198.7 155 66.5
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 1.6e-48 197.2 206 54.4
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 7.2e-46 188.3 102 86.3
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 1.2e-45 187.6 91 93.4
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 4.0e-44 182.6 158 65.8
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 1.3e-34 151.0 211 45.5
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 3.1e-33 146.4 82 80.5
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 1.2e-29 134.4 101 58.4
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 3.0e-28 129.8 120 64.2
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 4.1e-25 119.4 127 50.4
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 9.2e-25 118.2 59 89.8
Actinidia01032 Actinidia chinensis HOM05D005916 ORTHO05D007168 2.3e-23 113.6 207 44.0
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 1.9e-22 110.5 93 54.8
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 9.5e-22 108.2 103 50.5
CBR_g3263 Chara braunii HOM05D000019 ORTHO05D000353 9.2e-17 91.7 83 55.4
Cre12.g520850 Chlamydomonas reinhardtii HOM05D005916 ORTHO05D007168 1.6e-13 80.9 113 38.9
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.8e-13 80.1 52 69.2
SalBow2G0368 Salvia bowleyana HOM05D005916 ORTHO05D007168 4.4e-11 72.8 43 79.1
Solyc03g094070.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 2.9e-10 70.1 85 45.9
FAN11G3144 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.0e-07 60.1 106 43.4
Dinv07271 Davidia involucrata HOM05D005916 ORTHO05D007168 1.1e-06 58.2 39 66.7
Cfa025999 Carpinus fangiana HOM05D005916 ORTHO05D007168 9.5e-06 55.1 83 42.2


User provided reference genes

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