Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 6.0e-129 464.2 231 100.0
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 1.3e-123 446.4 231 95.7
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 5.7e-95 351.3 229 78.6
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 1.7e-94 349.7 229 76.9
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 2.2e-94 349.4 229 77.3
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 9.4e-90 334.0 222 76.1
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 6.1e-89 331.3 230 75.2
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.4e-85 320.1 219 72.1
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.8e-85 319.7 232 72.0
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 4.1e-85 318.5 228 73.7
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 4.1e-85 318.5 221 73.8
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 1.0e-83 313.9 208 74.5
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 1.7e-83 313.2 223 73.5
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.1e-82 310.5 233 70.8
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 2.5e-82 309.3 196 76.5
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 3.3e-82 308.9 228 69.7
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 7.2e-82 307.8 284 60.9
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 9.5e-82 307.4 209 74.6
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 6.1e-81 304.7 223 70.0
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.8e-80 303.1 222 69.4
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.8e-80 303.1 229 68.6
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 4.0e-80 302.0 225 70.2
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 5.2e-80 301.6 230 67.4
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 8.9e-80 300.8 226 66.8
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.5e-79 300.1 211 70.6
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 2.0e-79 299.7 202 73.3
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.6e-79 299.3 226 66.4
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.4e-79 298.5 226 66.4
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 9.8e-79 297.4 217 70.5
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.8e-78 295.8 208 70.7
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.8e-78 295.8 222 66.7
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 3.7e-78 295.4 229 67.2
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.1e-77 293.9 222 68.9
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 1.1e-77 293.9 219 69.9
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.4e-77 293.5 226 65.9
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.4e-77 292.7 194 73.7
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 2.4e-77 292.7 216 70.4
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 3.1e-77 292.4 230 67.4
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.1e-77 292.4 195 73.8
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 4.1e-77 292.0 206 69.9
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 5.4e-77 291.6 225 68.0
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 5.4e-77 291.6 194 72.7
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 5.4e-77 291.6 196 74.0
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.5e-76 288.9 221 67.4
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 4.5e-76 288.5 225 66.2
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 1.3e-75 287.0 231 65.4
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.3e-75 286.2 210 71.9
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 6.6e-75 284.6 210 71.0
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.1e-74 283.9 223 66.4
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 1.9e-74 283.1 196 71.9
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 5.6e-74 281.6 172 80.2
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 7.3e-74 281.2 212 69.3
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 9.5e-74 280.8 196 71.9
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 9.5e-74 280.8 208 68.8
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 9.5e-74 280.8 199 70.4
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 1.6e-73 280.0 202 70.3
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 4.0e-72 275.4 252 57.1
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 4.0e-72 275.4 239 62.8
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 6.8e-72 274.6 241 60.2
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 3.4e-71 272.3 221 64.7
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 4.4e-71 271.9 179 74.3
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 7.5e-71 271.2 178 74.7
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 7.5e-71 271.2 194 71.6
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 1.3e-70 270.4 185 72.4
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.4e-69 266.9 188 71.3
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.9e-69 266.5 222 62.6
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 3.2e-69 265.8 171 74.3
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 5.4e-69 265.0 177 73.4
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 7.8e-68 261.2 242 57.9
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.0e-67 260.8 231 61.0
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 1.0e-67 260.8 189 71.4
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 1.3e-67 260.4 216 63.4
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 3.9e-67 258.8 233 59.7
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 5.0e-67 258.5 192 68.8
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.1e-66 257.3 189 70.4
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 1.5e-66 256.9 186 71.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 5.6e-66 255.0 232 59.1
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 5.6e-66 255.0 228 61.8
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 1.2e-65 253.8 210 64.3
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 3.6e-65 252.3 158 74.7
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 6.2e-65 251.5 187 70.1
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 8.9e-64 247.7 187 69.0
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 8.9e-64 247.7 187 69.0
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.6e-63 246.1 240 57.9
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 4.9e-62 241.9 206 64.1
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 9.2e-61 237.7 237 55.7
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 9.2e-61 237.7 173 67.6
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 2.3e-59 233.0 241 54.8
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 3.9e-59 232.3 197 57.9
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 6.2e-57 224.9 137 77.4
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 8.6e-51 204.5 186 62.4
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 3.0e-43 179.5 144 68.1
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 3.3e-42 176.0 148 60.8
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 1.5e-39 167.2 99 77.8
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 2.0e-39 166.8 165 51.5
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 3.4e-39 166.0 100 82.0
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 4.4e-39 165.6 99 75.8
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 6.4e-38 161.8 115 74.8
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 2.4e-37 159.8 159 55.3
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 5.8e-31 138.7 152 46.1
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 4.9e-30 135.6 98 72.4
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 7.4e-26 121.7 111 54.1
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 6.9e-24 115.2 101 62.4
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.8e-23 112.1 63 81.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.4e-21 107.5 64 73.4
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 8.2e-17 91.7 92 57.6
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 1.4e-16 90.9 61 77.0
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.9e-14 83.2 95 53.7
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-13 81.3 59 66.1
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 9.3e-13 78.2 61 65.6
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 3.3e-10 69.7 146 32.2
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.5e-07 60.8 53 60.4


User provided reference genes

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