Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0117400 Salix brachista HOM05D005804 ORTHO05D006849 6.4e-60 233.8 112 100.0
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 4.8e-15 84.7 108 47.2
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 3.2e-11 72.0 105 43.8
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 2.7e-10 68.9 109 42.2
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 3.6e-10 68.6 112 42.9
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 1.4e-09 66.6 106 41.5
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.8e-09 66.2 108 39.8
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 2.3e-09 65.9 108 38.9
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 5.2e-09 64.7 108 38.9
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 6.8e-09 64.3 108 38.0
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 6.8e-09 64.3 108 38.0
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 6.8e-09 64.3 105 39.0
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 8.8e-09 63.9 105 37.1
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 8.8e-09 63.9 108 38.0
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 8.8e-09 63.9 108 38.9
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.2e-08 63.5 105 38.1
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 1.2e-08 63.5 104 40.4
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 1.2e-08 63.5 105 40.0
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.5e-08 63.2 107 38.3
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 1.5e-08 63.2 105 41.0
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 2.0e-08 62.8 108 39.8
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 2.6e-08 62.4 110 39.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 5.7e-08 61.2 108 36.1
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 5.7e-08 61.2 108 38.9
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 7.5e-08 60.8 105 37.1
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 7.5e-08 60.8 108 37.0
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 9.8e-08 60.5 102 39.2
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 9.8e-08 60.5 107 38.3
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 1.3e-07 60.1 102 40.2
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.7e-07 59.7 86 40.7
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.7e-07 59.7 108 36.1
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 2.2e-07 59.3 106 36.8
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 2.8e-07 58.9 108 38.0
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 2.8e-07 58.9 108 38.0
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 2.8e-07 58.9 103 37.9
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 2.8e-07 58.9 103 37.9
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.8e-07 58.9 103 37.9
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 2.8e-07 58.9 108 38.9
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 3.7e-07 58.5 105 35.2
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 3.7e-07 58.5 108 36.1
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 3.7e-07 58.5 108 37.0
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 3.7e-07 58.5 111 37.8
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 6.3e-07 57.8 104 38.5
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 6.3e-07 57.8 105 35.2
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 6.3e-07 57.8 108 37.0
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 8.3e-07 57.4 104 35.6
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 8.3e-07 57.4 109 35.8
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 8.3e-07 57.4 107 38.3
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 8.3e-07 57.4 106 35.8
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.1e-06 57.0 108 38.0
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.4e-06 56.6 104 36.5
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.4e-06 56.6 104 38.5
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.4e-06 56.6 105 37.1
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.8e-06 56.2 103 38.8
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 1.8e-06 56.2 106 39.6
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.8e-06 56.2 104 36.5
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 2.4e-06 55.8 110 38.2
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.4e-06 55.8 105 38.1
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 3.1e-06 55.5 105 36.2
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 3.1e-06 55.5 107 34.6
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 5.4e-06 54.7 105 36.2
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 5.4e-06 54.7 91 39.6


User provided reference genes

Program Settings