Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 9.5e-147 523.5 261 100.0
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.0e-108 397.1 233 85.8
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 7.6e-96 354.4 210 83.8
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 4.9e-95 351.7 213 84.5
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 1.9e-94 349.7 210 81.9
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 5.5e-94 348.2 210 81.4
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 7.1e-94 347.8 234 75.2
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 1.6e-93 346.7 233 76.0
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.7e-93 345.9 210 81.9
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 4.6e-93 345.1 210 81.4
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.3e-92 343.6 210 81.0
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.8e-92 343.2 210 83.3
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 3.0e-92 342.4 210 79.0
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.0e-92 342.4 210 81.4
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.0e-92 342.4 210 81.4
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 5.1e-92 341.7 210 81.4
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 6.7e-92 341.3 210 80.5
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.7e-92 341.3 210 82.9
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 8.7e-92 340.9 230 74.8
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 8.7e-92 340.9 210 80.0
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.1e-91 340.5 212 79.7
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.5e-91 340.1 210 82.4
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 1.5e-91 340.1 210 81.9
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.9e-91 339.7 210 81.4
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 4.3e-91 338.6 236 75.0
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 9.6e-91 337.4 210 80.5
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.6e-90 336.7 210 80.5
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 4.8e-90 335.1 219 77.2
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 6.3e-90 334.7 210 79.0
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 1.4e-89 333.6 218 76.6
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 1.8e-89 333.2 210 81.0
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.8e-89 333.2 210 79.5
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 4.1e-89 332.0 210 79.5
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 5.3e-89 331.6 212 77.8
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 6.9e-89 331.3 210 77.6
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 9.0e-89 330.9 232 70.3
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 9.0e-89 330.9 210 80.0
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.2e-88 330.5 234 70.1
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.0e-88 329.7 211 78.2
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 4.5e-88 328.6 260 67.3
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 5.9e-88 328.2 211 77.7
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 7.6e-88 327.8 234 69.7
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.0e-87 327.4 210 78.1
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 1.0e-87 327.4 210 76.7
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.3e-87 327.0 218 73.9
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.3e-87 327.0 234 69.7
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.3e-87 327.0 210 76.2
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.7e-87 326.6 210 76.2
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 2.2e-87 326.2 210 75.7
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.9e-87 325.9 227 73.1
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.9e-87 325.9 227 73.1
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.8e-87 325.5 238 68.1
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 3.8e-87 325.5 233 69.1
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 6.5e-87 324.7 229 71.6
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 8.4e-87 324.3 210 76.7
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.1e-86 323.9 233 70.0
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.9e-86 323.2 218 73.4
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.9e-86 323.2 226 73.5
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.9e-86 323.2 228 71.9
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 9.3e-86 320.9 212 75.0
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 9.3e-86 320.9 212 74.1
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 9.3e-86 320.9 227 70.9
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.6e-85 320.1 233 69.1
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.6e-85 320.1 233 69.1
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.6e-85 320.1 232 68.1
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 2.1e-85 319.7 233 68.7
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 2.1e-85 319.7 233 68.7
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 2.1e-85 319.7 230 70.0
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 3.5e-85 318.9 231 70.1
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 7.9e-85 317.8 233 68.7
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 1.0e-84 317.4 210 73.3
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.3e-84 317.0 209 78.5
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 3.0e-84 315.8 234 67.5
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 3.9e-84 315.5 227 70.0
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 6.7e-84 314.7 219 72.6
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 6.7e-84 314.7 216 72.2
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 8.7e-84 314.3 211 73.0
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.1e-83 313.9 210 74.3
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.5e-83 313.5 214 74.8
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 2.5e-83 312.8 211 73.9
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 3.3e-83 312.4 262 63.0
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.3e-82 310.5 212 74.1
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 2.2e-82 309.7 210 72.4
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 2.2e-82 309.7 210 72.9
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 6.3e-82 308.1 231 69.3
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.5e-80 303.5 215 70.7
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 5.9e-80 301.6 228 67.1
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 2.2e-79 299.7 210 73.8
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 9.4e-78 294.3 211 73.9
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.6e-77 293.5 211 71.1
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.4e-76 290.4 224 65.6
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.3e-76 289.7 231 65.8
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.0e-76 289.3 210 71.0
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 9.7e-75 284.3 221 68.3
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 2.0e-72 276.6 177 79.1
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 5.5e-70 268.5 168 73.2
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 3.9e-68 262.3 136 90.4
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 8.8e-68 261.2 211 65.4
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 4.8e-66 255.4 212 63.2
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.4e-65 253.8 170 71.8
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 9.1e-65 251.1 178 71.3
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.2e-63 246.5 243 56.0
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 1.1e-62 244.2 333 45.6
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.5e-62 243.0 145 77.9
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 5.5e-62 241.9 212 61.3
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 2.7e-61 239.6 157 75.8
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.0e-60 237.7 157 74.5
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 2.0e-59 233.4 146 81.5
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 1.2e-56 224.2 166 61.4
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 3.7e-50 202.6 128 67.2
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 5.4e-49 198.7 107 84.1
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 8.8e-44 181.4 175 52.6
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 4.3e-38 162.5 151 51.7
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.0e-36 157.9 121 63.6
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 8.0e-29 131.7 63 93.7
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.9e-25 120.6 63 82.5
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 6.6e-23 112.1 91 63.7
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 1.9e-22 110.5 141 45.4
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.3e-22 109.4 76 67.1
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.1e-20 104.8 118 48.3
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 6.4e-18 95.5 54 88.9


User provided reference genes

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