Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0115400 Salix brachista HOM05D000135 ORTHO05D000816 1.2e-26 123.6 141 100.0
Sabra02G0103700 Salix brachista HOM05D000135 ORTHO05D000816 1.1e-13 80.5 47 85.1
Potri.002G132500 Populus trichocarpa HOM05D000135 ORTHO05D000816 1.3e-12 77.0 47 83.0
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 1.4e-11 73.6 141 33.3
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.4e-11 73.6 141 33.3
Potri.015G093800 Populus trichocarpa HOM05D000135 ORTHO05D000816 4.1e-11 72.0 43 81.4
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 7.0e-11 71.2 141 32.6
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 9.1e-11 70.9 135 33.3
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 9.1e-11 70.9 135 33.3
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 9.1e-11 70.9 135 34.1
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 2.0e-10 69.7 135 33.3
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 4.5e-10 68.6 135 33.3
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 2.9e-09 65.9 136 81.6
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 3.8e-09 65.5 141 78.0
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 5.0e-09 65.1 50 62.0
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.5e-09 64.3 136 32.4
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 1.1e-08 63.9 136 33.1
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 1.1e-08 63.9 136 33.1
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 1.1e-08 63.9 139 30.2
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.5e-08 62.8 136 32.4
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.5e-08 62.8 136 31.6
Manes.06G118200 Manihot esculenta HOM05D000135 ORTHO05D000816 2.5e-08 62.8 43 65.1
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 4.2e-08 62.0 136 31.6
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 4.2e-08 62.0 134 30.6
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 5.5e-08 61.6 139 30.2
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 5.5e-08 61.6 134 54.5
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 9.4e-08 60.8 137 30.7
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 9.4e-08 60.8 139 30.2
Gohir.A03G053400 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.2e-07 60.5 141 63.1
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 1.2e-07 60.5 139 28.8
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 1.2e-07 60.5 139 30.2
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 1.6e-07 60.1 139 30.2
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.6e-07 60.1 139 30.2
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.1e-07 59.7 136 30.9
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 2.1e-07 59.7 47 59.6
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 137 29.9
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 2.1e-07 59.7 50 56.0
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 3.6e-07 58.9 142 79.6
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 137 30.7
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 137 30.7
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.6e-07 58.9 140 30.7
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 4.7e-07 58.5 137 29.9
Phvul.004G055200 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 4.7e-07 58.5 139 33.1
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 4.7e-07 58.5 137 30.7
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 6.1e-07 58.2 141 75.2
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 6.1e-07 58.2 48 58.3
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 6.1e-07 58.2 48 58.3
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 6.1e-07 58.2 139 29.5
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.1e-07 58.2 137 29.9
VMungo1215G1953 Vigna mungo HOM05D000135 ORTHO05D000816 6.1e-07 58.2 141 75.9
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 8.0e-07 57.8 142 29.6
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 136 30.1
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 8.0e-07 57.8 43 60.5
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 8.0e-07 57.8 142 30.3
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 8.0e-07 57.8 137 36.5
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 1.0e-06 57.4 137 30.7
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 1.0e-06 57.4 135 31.1
Duzib068G0781 Durio zibethinus HOM05D000135 ORTHO05D000816 1.4e-06 57.0 50 56.0
Glyma.18G177900 Glycine max HOM05D000135 ORTHO05D000816 1.4e-06 57.0 135 31.9
Psat5g140800 Pisum sativum HOM05D000135 ORTHO05D000816 1.4e-06 57.0 142 50.0
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 1.4e-06 57.0 136 72.8
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 1.8e-06 56.6 136 26.5
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 1.8e-06 56.6 139 33.8
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.8e-06 56.6 135 28.9
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 1.8e-06 56.6 137 29.9
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 1.8e-06 56.6 137 28.5
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 1.8e-06 56.6 139 61.2
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 50 54.0
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 2.3e-06 56.2 136 28.7
Duzib205G1548 Durio zibethinus HOM05D000135 ORTHO05D000816 2.3e-06 56.2 44 61.4
Glyma.04G194800 Glycine max HOM05D000135 ORTHO05D000816 2.3e-06 56.2 41 63.4
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 2.3e-06 56.2 139 46.0
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 2.3e-06 56.2 139 63.3
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 137 29.2
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 3.0e-06 55.8 141 74.5
MBI01_g44779_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 3.0e-06 55.8 135 28.9
Phvul.003G210000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 3.0e-06 55.8 141 65.2
QL02p071822 Quercus lobata HOM05D000135 ORTHO05D000816 4.0e-06 55.5 50 52.0
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 4.0e-06 55.5 139 28.8
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 4.0e-06 55.5 134 27.6
TWI14G0593 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 4.0e-06 55.5 143 29.4
GSVIVG01010385001 Vitis vinifera HOM05D000135 ORTHO05D000816 4.0e-06 55.5 48 56.2
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 50.0
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 5.2e-06 55.1 139 69.1
Ciclev10022753m.g Citrus clementina HOM05D000135 ORTHO05D000816 6.7e-06 54.7 47 55.3
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 6.7e-06 54.7 45 53.3
Lj7C609T6 Lonicera japonica HOM05D000135 ORTHO05D000816 6.7e-06 54.7 140 38.6
Nn4g22363 Nelumbo nucifera HOM05D000135 ORTHO05D000816 6.7e-06 54.7 137 28.5
Nn4g22368 Nelumbo nucifera HOM05D000135 ORTHO05D000816 6.7e-06 54.7 137 29.2
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 139 28.8
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 6.7e-06 54.7 139 69.1
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 6.7e-06 54.7 137 28.5
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 8.8e-06 54.3 50 50.0
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 8.8e-06 54.3 42 50.0
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 8.8e-06 54.3 38 60.5
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 8.8e-06 54.3 38 60.5
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 8.8e-06 54.3 134 26.9
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 8.8e-06 54.3 139 74.8
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 8.8e-06 54.3 139 74.8
GSVIVG01010383001 Vitis vinifera HOM05D000135 ORTHO05D000816 8.8e-06 54.3 48 54.2


User provided reference genes

Program Settings