Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 0.0e+00 2062.7 1072 100.0
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 0.0e+00 1833.5 1079 86.5
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 0.0e+00 1562.0 1080 77.3
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 0.0e+00 1484.5 1080 73.5
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 0.0e+00 1187.6 1112 58.1
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 7.3e-302 1040.8 1144 53.8
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 7.8e-296 1020.8 1093 53.1
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.4e-292 1010.0 1080 53.1
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 3.4e-291 1005.4 1094 53.8
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 3.7e-290 1001.9 1171 50.6
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 4.1e-289 998.4 1161 50.5
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.9e-286 989.6 1199 50.0
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 2.3e-284 982.6 1165 53.6
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 3.1e-284 982.2 1156 50.9
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 8.9e-284 980.7 1114 51.2
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 9.2e-281 970.7 1055 52.4
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.0e-279 967.2 1135 53.0
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 3.9e-279 965.3 1142 52.1
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.3e-278 962.2 1134 52.6
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 4.0e-276 955.3 1132 50.5
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 2.0e-275 953.0 1168 48.2
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.6e-275 951.0 1136 50.4
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 2.1e-272 943.0 1168 50.0
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.7e-271 939.9 1093 50.3
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.1e-268 930.6 1186 46.7
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.9e-265 919.8 1090 49.8
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 3.2e-265 919.1 1089 49.7
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.7e-263 913.3 1186 49.2
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.7e-263 913.3 1209 47.3
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 4.3e-262 908.7 1093 48.9
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.1e-260 902.5 1178 46.7
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.4e-257 892.9 979 51.8
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.1e-256 889.8 1164 47.1
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 2.1e-253 879.8 1111 47.2
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.4e-252 877.1 900 53.9
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 2.9e-250 869.4 1092 47.8
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 1.9e-249 866.7 1147 47.6
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 9.3e-241 837.8 1136 45.4
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.6e-240 837.0 1096 47.4
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.8e-239 833.6 1094 48.6
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 6.7e-239 831.6 1158 44.7
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 7.4e-238 828.2 1070 46.2
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.8e-236 823.5 1109 46.3
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.8e-236 823.5 1260 42.3
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.4e-236 823.2 1183 44.0
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 5.3e-236 822.0 1163 44.4
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.2e-235 820.8 1163 45.4
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.0e-234 817.8 1079 48.7
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 8.5e-234 814.7 1131 44.9
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 1.1e-233 814.3 1087 48.3
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.4e-233 813.9 1094 46.1
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 2.5e-233 813.1 1082 48.5
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 4.2e-233 812.4 1159 45.0
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 4.2e-233 812.4 1078 47.4
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.4e-231 807.4 558 70.4
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.8e-231 807.0 1078 47.0
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 6.3e-229 798.5 1082 46.8
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 5.0e-226 788.9 1164 42.9
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 8.5e-226 788.1 1029 46.5
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 3.6e-224 782.7 1080 45.4
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 7.9e-224 781.6 1180 41.2
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 3.0e-223 779.6 1113 43.8
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 3.0e-223 779.6 1116 43.8
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.7e-221 773.9 1077 44.4
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 6.3e-221 771.9 558 68.1
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.1e-220 771.2 1090 44.7
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.4e-220 770.8 1079 45.0
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.0e-218 764.6 1085 43.0
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-217 760.8 1008 46.3
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.2e-216 757.7 1093 43.9
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 8.0e-216 755.0 1122 42.9
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 8.0e-216 755.0 1169 42.9
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 3.9e-215 752.7 1010 46.3
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 5.2e-215 752.3 1076 44.5
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 6.7e-215 751.9 1173 42.8
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 1.5e-214 750.7 1057 45.5
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 2.0e-214 750.4 1126 42.7
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.8e-213 746.5 1065 45.1
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 6.3e-213 745.3 1065 44.7
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 1.1e-212 744.6 1114 42.5
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 7.0e-212 741.9 1093 44.3
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.5e-209 734.2 1063 44.3
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.5e-209 733.4 915 45.2
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.1e-208 730.3 1089 42.8
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 6.8e-207 725.3 990 44.4
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 5.7e-206 722.2 1060 44.2
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.3e-205 721.1 999 43.0
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.7e-205 720.7 924 46.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 2.2e-205 720.3 1026 45.9
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 9.1e-204 714.9 1133 41.9
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 9.1e-204 714.9 1125 41.3
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 5.0e-202 709.1 742 54.3
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 6.1e-200 702.2 1091 41.1
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.0e-194 684.9 1136 43.4
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 4.3e-185 652.9 1205 37.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.8e-182 642.5 1180 39.2
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 4.9e-181 639.4 990 40.6
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 5.6e-177 625.9 1036 38.6
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 8.1e-176 622.1 581 53.7
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 4.3e-169 599.7 1085 37.2
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.2e-150 538.5 493 57.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.3e-146 525.0 1168 33.7
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 1.7e-146 524.6 842 41.4
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.4e-143 515.0 918 39.1
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 3.8e-141 506.9 774 40.3
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 4.5e-134 483.4 315 73.7
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.1e-132 478.8 413 57.9
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.0e-130 472.2 919 37.8
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 5.5e-124 449.9 569 45.7
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 9.3e-124 449.1 590 44.7
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.2e-117 427.9 437 51.9
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.6e-115 421.8 508 43.3
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 6.9e-111 406.4 526 43.7
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.6e-105 387.9 775 37.9
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 5.2e-82 310.5 706 36.4
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.0e-77 296.2 227 68.3
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 2.9e-72 278.1 230 59.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 6.6e-69 266.9 725 32.8
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 4.2e-31 141.4 276 34.8
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 3.7e-19 101.7 80 63.8
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.7e-19 101.7 588 25.5
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.2e-17 96.7 199 31.7
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.6e-17 95.5 167 41.3
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 6.5e-16 90.9 69 62.3
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 6.5e-16 90.9 87 52.9
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 8.4e-16 90.5 57 68.4
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 1.1e-15 90.1 103 44.7
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 2.5e-15 89.0 51 76.5
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.2e-15 88.6 134 50.0
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.3e-13 83.2 51 70.6
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.4e-10 73.2 149 40.3
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 4.1e-10 71.6 645 23.9
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 8.5e-08 63.9 144 40.3


User provided reference genes

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