Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0099900 Salix brachista HOM05D015619 ORTHO05D009044 5.2e-292 1006.9 483 100.0
Sabra15G0099600 Salix brachista HOM05D015619 ORTHO05D009044 1.5e-291 1005.4 483 99.8
Sabra15G0099200 Salix brachista HOM05D015619 ORTHO05D009044 3.2e-289 997.7 483 99.4
Sabra15G0100200 Salix brachista HOM05D015619 ORTHO05D009044 3.8e-274 947.6 456 99.8
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 7.6e-259 896.7 478 92.7
Potri.001G054200 Populus trichocarpa HOM05D015619 ORTHO05D009044 3.2e-225 785.0 511 78.1
Sabra01G0038800 Salix brachista HOM05D015619 ORTHO05D009044 8.8e-223 776.9 486 80.2
Sabra03G0128000 Salix brachista HOM05D015619 ORTHO05D009044 2.0e-89 334.0 497 42.9
Duzib248G1625 Durio zibethinus HOM05D007346 ORTHO05D009044 3.3e-44 183.7 430 32.6
Cfa005279 Carpinus fangiana HOM05D007346 ORTHO05D009044 9.9e-41 172.2 428 31.8
Cfa005319 Carpinus fangiana HOM05D007346 ORTHO05D009044 6.4e-40 169.5 428 32.2
Haze_02114 Corylus avellana HOM05D007346 ORTHO05D009044 3.0e-37 160.6 435 30.6
TWI81G1010 Tripterygium wilfordii HOM05D007346 ORTHO05D009044 8.7e-37 159.1 476 29.2
FAN24G2319 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.9e-36 157.9 470 27.7
Ciclev10030189m.g Citrus clementina HOM05D007346 ORTHO05D009044 9.6e-36 155.6 464 31.9
Haze_02115 Corylus avellana HOM05D007346 ORTHO05D009044 9.6e-36 155.6 522 29.5
Prupe.8G152400 Prunus persica HOM05D007346 ORTHO05D009044 5.3e-34 149.8 437 30.7
RcHm_v2.0_Chr6g0247891 Rosa chinensis HOM05D007346 ORTHO05D009044 1.0e-32 145.6 473 27.5
RcHm_v2.0_Chr4g0388171 Rosa chinensis HOM05D007346 ORTHO05D009044 8.4e-32 142.5 463 27.9
RcHm_v2.0_Chr5g0063131 Rosa chinensis HOM05D007346 ORTHO05D009044 8.4e-32 142.5 467 31.0
Gorai.009G294900 Gossypium raimondii HOM05D007346 ORTHO05D009044 1.2e-30 138.7 435 29.0
Cfa012527 Carpinus fangiana HOM05D007346 ORTHO05D009044 7.9e-30 136.0 520 27.1
RcHm_v2.0_Chr6g0254551 Rosa chinensis HOM05D007346 ORTHO05D009044 1.3e-29 135.2 467 29.1
Thecc.02G045400 Theobroma cacao HOM05D007346 ORTHO05D009044 1.3e-29 135.2 430 30.5
FvH4_2g03062 Fragaria vesca HOM05D007346 ORTHO05D009044 3.9e-29 133.7 447 27.1
FvH4_2g04880 Fragaria vesca HOM05D007346 ORTHO05D009044 5.1e-29 133.3 475 27.8
Cfa005278 Carpinus fangiana HOM05D007346 ORTHO05D009044 6.7e-29 132.9 279 35.1
FAN24G1006 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.7e-29 132.9 475 27.2
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 6.7e-29 132.9 485 28.2
Gohir.D05G281400 Gossypium hirsutum HOM05D007346 ORTHO05D009044 1.1e-28 132.1 434 29.0
Duzib132G1061 Durio zibethinus HOM05D007346 ORTHO05D009044 1.5e-28 131.7 436 28.9
TWI59G0144 Tripterygium wilfordii HOM05D007346 ORTHO05D009044 1.5e-28 131.7 454 28.9
FvH4_4g01970 Fragaria vesca HOM05D007346 ORTHO05D009044 2.5e-28 131.0 446 28.0
FvH4_4g02080 Fragaria vesca HOM05D007346 ORTHO05D009044 9.6e-28 129.0 447 27.5
FAN12G0105 Fragaria x ananassa HOM05D007346 ORTHO05D009044 9.6e-28 129.0 446 28.0
Prupe.8G151600 Prunus persica HOM05D007346 ORTHO05D009044 4.8e-27 126.7 438 27.6
FAN24G3266 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.7e-24 118.2 477 25.8
Gohir.A05G279800 Gossypium hirsutum HOM05D007346 ORTHO05D009044 2.2e-24 117.9 434 27.2
RcHm_v2.0_Chr4g0393471 Rosa chinensis HOM05D007346 ORTHO05D009044 2.2e-24 117.9 505 25.9
FvH4_2g16551 Fragaria vesca HOM05D007346 ORTHO05D009044 1.4e-23 115.2 477 26.0
FvH4_2g03731 Fragaria vesca HOM05D007346 ORTHO05D009044 2.5e-23 114.4 434 29.5
FAN15G1854 Fragaria x ananassa HOM05D007346 ORTHO05D009044 4.2e-23 113.6 475 25.9
FAN18G1252 Fragaria x ananassa HOM05D007346 ORTHO05D009044 9.3e-23 112.5 437 27.2
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.1e-22 111.3 439 26.0
FvH4_4g01581 Fragaria vesca HOM05D007346 ORTHO05D009044 2.7e-22 110.9 439 27.3
RcHm_v2.0_Chr4g0393001 Rosa chinensis HOM05D007346 ORTHO05D009044 2.7e-22 110.9 505 25.7
FAN20G2910 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.1e-22 109.8 447 26.6
FAN24G3549 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.3e-21 108.6 463 28.1
FAN12G1074 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.8e-21 108.2 377 28.1
FvH4_2g16580 Fragaria vesca HOM05D007346 ORTHO05D009044 3.0e-21 107.5 468 27.8
FAN15G1511 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.0e-21 107.5 455 29.2
FvH4_4g02090 Fragaria vesca HOM05D007346 ORTHO05D009044 5.1e-21 106.7 445 26.1
FAN15G1755 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.1e-21 106.7 481 26.8
FAN17G3078 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.7e-21 106.3 433 26.6
FvH4_2g04271 Fragaria vesca HOM05D007346 ORTHO05D009044 1.3e-19 102.1 452 25.9
FvH4_4g01590 Fragaria vesca HOM05D007346 ORTHO05D009044 2.8e-19 100.9 431 26.2
RcHm_v2.0_Chr6g0254631 Rosa chinensis HOM05D007346 ORTHO05D009044 3.7e-19 100.5 514 26.1
FvH4_4g02150 Fragaria vesca HOM05D007346 ORTHO05D009044 4.8e-19 100.1 367 29.4
RcHm_v2.0_Chr6g0254611 Rosa chinensis HOM05D007346 ORTHO05D009044 6.3e-19 99.8 512 25.4
FAN22G0819 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.1e-18 99.0 404 28.0
FAN12G0212 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.5e-17 95.1 402 26.1
FvH4_2g16550 Fragaria vesca HOM05D007346 ORTHO05D009044 1.3e-16 92.0 458 26.4
Thecc.02G045200 Theobroma cacao HOM05D007346 ORTHO05D009044 1.4e-15 88.6 424 24.8
Gorai.009G294800 Gossypium raimondii HOM05D007346 ORTHO05D009044 2.5e-15 87.8 209 31.1
FvH4_4g01551 Fragaria vesca HOM05D007346 ORTHO05D009044 1.6e-14 85.1 192 32.8
MD03G1012300 Malus domestica HOM05D007346 ORTHO05D009044 1.4e-13 82.0 432 24.1
FAN21G1548 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.8e-13 79.3 276 26.8
FAN25G0093 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.8e-13 79.3 199 31.7
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 1.5e-12 78.6 455 24.6
FvH4_5g33621 Fragaria vesca HOM05D007346 ORTHO05D035450 2.0e-12 78.2 339 24.8
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.0e-12 78.2 457 23.6
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 5.7e-12 76.6 449 25.4
FAN24G3164 Fragaria x ananassa HOM05D007346 ORTHO05D009044 9.1e-10 69.3 295 26.4
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.1e-10 69.3 227 26.0
SGA_v2.0_scaffold32G13296 Striga asiatica HOM05D028864 ORTHO05D009044 1.5e-09 68.6 188 28.7
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.0e-09 68.2 199 32.2
FAN06G1165 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.6e-09 67.8 174 32.2
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 3.4e-09 67.4 189 30.2
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 3.4e-09 67.4 189 30.2
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 5.9e-09 66.6 195 27.7
Gohir.D05G281350 Gossypium hirsutum HOM05D007346 ORTHO05D009044 7.7e-09 66.2 203 28.6
RcHm_v2.0_Chr4g0388141 Rosa chinensis HOM05D007346 ORTHO05D009044 7.7e-09 66.2 134 33.6
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.0e-08 65.9 216 28.7
Haze_22777 Corylus avellana HOM05D000151 ORTHO05D000074 1.3e-08 65.5 213 29.6
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.9e-08 64.3 204 29.4
MELO3C017000.2 Cucumis melo HOM05D000151 ORTHO05D000074 6.5e-08 63.2 206 32.0
FvH4_7g08620 Fragaria vesca HOM05D007346 ORTHO05D009044 8.5e-08 62.8 111 35.1
Gorai.010G001100 Gossypium raimondii HOM05D000151 ORTHO05D000074 8.5e-08 62.8 202 29.7
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 8.5e-08 62.8 204 28.4
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.5e-08 62.8 431 22.7
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.4e-07 62.0 200 29.0
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 1.4e-07 62.0 177 28.8
MBI19_g33448_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.4e-07 62.0 399 22.6
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-07 62.0 183 29.0
SGA_v2.0_scaffold32G13304 Striga asiatica HOM05D028864 ORTHO05D009044 1.9e-07 61.6 191 28.8
TAR362G0800 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.9e-07 61.6 384 22.9
FAN15G2041 Fragaria x ananassa HOM05D032922 ORTHO05D035758 2.5e-07 61.2 411 24.3
TWI38G0386 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.5e-07 61.2 436 20.6
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 4.2e-07 60.5 200 32.0
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 4.2e-07 60.5 205 25.4
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 4.2e-07 60.5 226 27.9
CsaV3_4G037010 Cucumis sativus L. HOM05D000151 ORTHO05D000074 7.2e-07 59.7 206 31.1
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 7.2e-07 59.7 206 27.2
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 7.2e-07 59.7 223 30.5
PSO210G2694 Papaver somniferum HOM05D000151 ORTHO05D000074 7.2e-07 59.7 199 27.1
Lsat_1_v5_gn_9_46700 Lactuca sativa HOM05D000151 ORTHO05D000074 9.4e-07 59.3 206 26.7
TPR.G38190 Trifolium pratense HOM05D000151 ORTHO05D000074 9.4e-07 59.3 190 25.3
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.4e-07 59.3 202 27.7
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 1.2e-06 58.9 182 27.5
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-06 58.5 178 30.3
SGA_v2.0_scaffold32G13300 Striga asiatica HOM05D028864 ORTHO05D009044 2.7e-06 57.8 113 32.7
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.7e-06 57.8 167 29.3
Atru.chr5.3530 Acer truncatum HOM05D015619 ORTHO05D009044 3.6e-06 57.4 111 33.3
Haze_22770 Corylus avellana HOM05D000151 ORTHO05D000074 6.1e-06 56.6 182 29.1
TAR636G2826 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.1e-06 56.6 381 20.7


User provided reference genes

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