Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 2.4e-125 452.2 231 100.0
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 1.4e-72 276.9 153 94.8
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 6.2e-65 251.5 158 86.1
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 4.4e-63 245.4 159 83.6
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 4.4e-47 192.2 146 71.9
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 7.6e-47 191.4 160 66.2
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 1.3e-46 190.7 159 66.7
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 1.7e-46 190.3 161 64.0
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 8.4e-46 188.0 148 68.2
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.4e-45 187.2 146 67.1
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.4e-45 187.2 146 67.1
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 5.4e-45 185.3 163 58.9
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 7.1e-45 184.9 148 67.6
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 1.2e-44 184.1 145 68.3
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 2.7e-44 183.0 160 61.9
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 1.0e-43 181.0 144 66.0
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.7e-43 180.3 161 61.5
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 3.9e-43 179.1 157 61.1
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 5.1e-43 178.7 147 63.9
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 8.7e-43 177.9 157 63.1
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 1.1e-42 177.6 159 62.3
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.9e-42 176.8 148 64.2
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 2.5e-42 176.4 159 61.6
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 4.3e-42 175.6 147 63.3
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 4.7e-41 172.2 161 61.5
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 1.4e-40 170.6 153 62.7
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.8e-40 170.2 149 62.4
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.8e-40 170.2 149 63.1
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 3.1e-40 169.5 159 59.1
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 5.3e-40 168.7 159 59.7
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 5.3e-40 168.7 183 53.0
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 6.9e-40 168.3 142 64.1
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 6.9e-40 168.3 158 59.5
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 1.2e-39 167.5 183 52.5
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 1.2e-39 167.5 159 58.5
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 1.5e-39 167.2 161 59.6
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 1.5e-39 167.2 157 59.2
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 2.0e-39 166.8 159 59.1
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 5.8e-39 165.2 144 61.1
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 2.2e-38 163.3 159 57.2
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 3.8e-38 162.5 164 53.7
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 4.9e-38 162.2 146 59.6
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 8.4e-38 161.4 146 59.6
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 8.4e-38 161.4 146 59.6
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 8.4e-38 161.4 147 61.2
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 1.1e-37 161.0 152 59.2
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.1e-37 161.0 161 56.5
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 1.4e-37 160.6 160 57.5
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.4e-37 160.6 144 60.4
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.4e-37 160.6 144 60.4
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 1.4e-37 160.6 147 60.5
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.9e-37 160.2 161 58.4
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 1.9e-37 160.2 160 58.1
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 1.9e-37 160.2 160 58.1
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 2.4e-37 159.8 149 59.7
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 3.2e-37 159.5 149 59.1
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 4.2e-37 159.1 153 56.2
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 4.2e-37 159.1 145 61.4
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 4.2e-37 159.1 158 56.3
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 4.2e-37 159.1 142 59.9
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 5.4e-37 158.7 142 60.6
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 5.4e-37 158.7 147 62.6
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 7.1e-37 158.3 161 56.5
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 7.1e-37 158.3 151 62.3
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 9.3e-37 157.9 144 59.7
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 1.2e-36 157.5 142 61.3
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 1.6e-36 157.1 179 52.5
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 3.5e-36 156.0 161 57.8
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 6.0e-36 155.2 161 57.1
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 6.0e-36 155.2 161 54.7
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 7.8e-36 154.8 150 54.7
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 7.8e-36 154.8 142 59.9
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.0e-35 154.5 145 57.2
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.0e-35 154.5 150 58.0
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 1.7e-35 153.7 146 56.2
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 2.3e-35 153.3 144 57.6
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 2.3e-35 153.3 161 57.1
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 8.7e-35 151.4 161 55.3
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 1.9e-34 150.2 142 57.0
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.3e-34 149.1 142 57.7
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 7.3e-34 148.3 142 57.7
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 7.3e-34 148.3 142 57.7
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 7.3e-34 148.3 116 64.7
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.3e-33 147.5 146 57.5
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.8e-33 146.4 140 57.1
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.8e-33 146.4 158 53.2
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 4.8e-33 145.6 160 53.1
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 4.8e-33 145.6 125 59.2
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 6.2e-33 145.2 174 50.0
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 7.6e-31 138.3 167 47.9
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 7.6e-31 138.3 168 48.2
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 3.2e-29 132.9 118 56.8
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 1.2e-28 131.0 122 55.7
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 1.0e-27 127.9 149 53.0
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.3e-27 127.5 162 46.9
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 2.3e-27 126.7 149 50.3
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 2.3e-27 126.7 144 53.5
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 3.1e-24 116.3 97 61.9
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 1.2e-23 114.4 144 48.6
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 8.4e-22 108.2 91 61.5
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 3.5e-20 102.8 101 50.5
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 4.6e-20 102.4 88 55.7
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 6.7e-19 98.6 195 37.4
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 9.6e-18 94.7 121 43.0
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.6e-17 94.0 193 33.7
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 8.2e-17 91.7 152 38.2
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.4e-13 80.9 166 33.7
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 9.3e-13 78.2 119 40.3
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 2.1e-12 77.0 144 34.0
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-11 73.2 78 50.0
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-11 73.2 98 42.9
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-10 70.5 107 39.3
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-10 70.5 107 39.3
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 2.5e-10 70.1 69 58.0
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 3.3e-10 69.7 110 37.3
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 3.7e-09 66.2 40 72.5
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 6.3e-09 65.5 64 50.0
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-08 64.7 82 41.5
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-08 64.7 72 51.4
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 3.1e-08 63.2 64 57.8
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 4.1e-08 62.8 59 57.6
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-07 60.8 91 40.7
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 1.5e-07 60.8 56 60.7
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 4.5e-07 59.3 85 43.5
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 5.9e-07 58.9 113 34.5
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-06 58.2 102 39.2
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-06 58.2 99 40.4
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-06 57.8 99 41.4
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-06 57.4 105 38.1
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-06 57.4 84 41.7
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-06 57.4 102 37.3
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 2.2e-06 57.0 99 40.4
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 5.0e-06 55.8 99 40.4
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 6.5e-06 55.5 105 36.2


User provided reference genes

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