Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 1.9e-37 158.7 82 100.0
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 6.0e-15 84.0 45 86.7
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 6.0e-15 84.0 68 64.7
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 7.9e-15 83.6 49 77.6
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 1.0e-14 83.2 45 86.7
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 3.0e-14 81.6 45 84.4
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 5.1e-14 80.9 45 82.2
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 8.7e-14 80.1 45 82.2
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 1.1e-13 79.7 48 79.2
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 1.5e-13 79.3 53 73.6
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 1.5e-13 79.3 45 82.2
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 1.9e-13 79.0 46 80.4
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 2.5e-13 78.6 45 82.2
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 3.3e-13 78.2 47 74.5
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 3.3e-13 78.2 56 64.3
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 4.3e-13 77.8 45 77.8
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 4.3e-13 77.8 49 73.5
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 4.3e-13 77.8 45 77.8
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 5.7e-13 77.4 49 71.4
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 5.7e-13 77.4 66 65.2
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 7.4e-13 77.0 45 75.6
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 7.4e-13 77.0 45 75.6
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 7.4e-13 77.0 45 75.6
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 7.4e-13 77.0 45 75.6
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 7.4e-13 77.0 45 75.6
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 7.4e-13 77.0 45 77.8
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 7.4e-13 77.0 45 75.6
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 9.6e-13 76.6 46 73.9
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 1.3e-12 76.3 45 75.6
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 1.3e-12 76.3 45 75.6
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 1.6e-12 75.9 45 75.6
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.6e-12 75.9 63 58.7
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 2.1e-12 75.5 45 80.0
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 2.1e-12 75.5 45 75.6
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 2.8e-12 75.1 61 55.7
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 2.8e-12 75.1 45 73.3
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 3.7e-12 74.7 57 63.2
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 4.8e-12 74.3 45 75.6
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 6.2e-12 73.9 44 77.3
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 6.2e-12 73.9 45 73.3
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 8.2e-12 73.6 45 75.6
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 8.2e-12 73.6 45 75.6
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 8.2e-12 73.6 45 75.6
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 8.2e-12 73.6 45 77.8
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 8.2e-12 73.6 45 71.1
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 8.2e-12 73.6 47 72.3
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 1.4e-11 72.8 45 71.1
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 1.4e-11 72.8 45 75.6
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 1.4e-11 72.8 44 72.7
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 1.4e-11 72.8 45 77.8
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 1.8e-11 72.4 45 75.6
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.8e-11 72.4 45 71.1
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 2.4e-11 72.0 61 57.4
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 4.0e-11 71.2 45 73.3
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 4.0e-11 71.2 59 57.6
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 5.3e-11 70.9 45 75.6
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 1.2e-10 69.7 60 60.0
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 1.2e-10 69.7 48 72.9
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 1.5e-10 69.3 45 71.1
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 1.5e-10 69.3 44 65.9
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 2.6e-10 68.6 45 71.1
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.6e-10 68.6 57 61.4
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 3.4e-10 68.2 45 66.7
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 3.4e-10 68.2 45 73.3
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 3.4e-10 68.2 45 73.3
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 4.5e-10 67.8 45 71.1
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 4.5e-10 67.8 45 68.9
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 1.7e-09 65.9 57 59.6
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 1.7e-09 65.9 45 68.9
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.2e-09 65.5 44 72.7
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 1.1e-08 63.2 58 60.3
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 1.9e-08 62.4 42 69.0
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 3.2e-08 61.6 45 64.4
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 3.2e-08 61.6 38 78.9
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 1.2e-07 59.7 37 78.4
QL10p013938 Quercus lobata HOM05D007939 ORTHO05D010027 4.6e-07 57.8 42 64.3
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 6.1e-07 57.4 43 67.4
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 7.9e-07 57.0 38 71.1
Zm00001eb123900 Zea mays HOM05D007939 ORTHO05D010027 1.3e-06 56.2 38 68.4


User provided reference genes

Program Settings