Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 3.5e-158 561.6 291 100.0
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.4e-103 380.2 249 82.3
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 4.1e-74 282.3 234 66.7
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.9e-72 276.2 239 62.3
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 5.5e-71 271.9 238 62.2
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 9.5e-71 271.2 245 64.1
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.1e-70 270.0 253 60.5
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 2.1e-70 270.0 234 64.1
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 2.1e-70 270.0 176 79.5
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 2.8e-70 269.6 243 65.4
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.4e-69 267.3 236 61.9
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 2.3e-69 266.5 237 63.3
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 8.9e-69 264.6 237 61.6
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 1.2e-68 264.2 178 74.2
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.2e-68 264.2 248 62.5
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 2.6e-68 263.1 245 63.3
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 4.4e-68 262.3 243 61.7
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 5.7e-68 261.9 245 62.0
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 5.7e-68 261.9 168 77.4
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 1.7e-67 260.4 253 60.1
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 2.2e-67 260.0 236 62.7
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.2e-67 260.0 234 62.4
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 2.2e-67 260.0 234 62.4
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 3.2e-66 256.1 168 76.2
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 7.0e-66 255.0 238 57.1
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.2e-65 254.2 166 73.5
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 2.0e-65 253.4 179 71.5
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 2.7e-65 253.1 244 61.1
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 2.7e-65 253.1 243 58.0
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 4.5e-65 252.3 233 60.5
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 1.0e-64 251.1 247 60.3
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.0e-64 251.1 238 55.0
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 1.0e-64 251.1 210 64.8
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 1.3e-64 250.8 184 70.1
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 1.3e-64 250.8 187 68.4
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 2.9e-64 249.6 238 55.9
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 2.9e-64 249.6 176 71.0
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 5.0e-64 248.8 234 56.8
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 8.6e-64 248.1 232 58.6
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.1e-63 247.7 227 58.6
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 1.1e-63 247.7 247 57.1
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 1.9e-63 246.9 181 67.4
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 2.5e-63 246.5 177 68.4
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 3.3e-63 246.1 185 67.6
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 7.3e-63 245.0 215 62.3
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 7.3e-63 245.0 154 77.3
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 7.3e-63 245.0 215 61.9
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 9.5e-63 244.6 171 70.8
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 1.2e-62 244.2 170 72.4
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 2.1e-62 243.4 183 65.0
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 2.1e-62 243.4 183 65.0
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 2.1e-62 243.4 185 68.6
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 2.8e-62 243.0 234 57.3
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 3.6e-62 242.7 166 74.1
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 6.1e-62 241.9 200 61.5
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 8.0e-62 241.5 165 72.1
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 1.0e-61 241.1 183 65.0
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.0e-61 241.1 187 63.1
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 1.0e-61 241.1 215 61.4
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.8e-61 240.4 177 67.8
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 1.8e-61 240.4 165 74.5
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 4.0e-61 239.2 164 72.6
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 5.2e-61 238.8 172 67.4
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 8.9e-61 238.0 164 72.0
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.2e-60 237.7 183 63.4
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.2e-60 237.7 234 59.4
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 2.0e-60 236.9 175 66.9
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 2.0e-60 236.9 196 63.3
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 3.4e-60 236.1 182 64.8
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 7.5e-60 235.0 233 59.7
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 7.5e-60 235.0 182 67.6
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.3e-59 234.2 187 62.0
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 1.7e-59 233.8 187 62.0
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 1.7e-59 233.8 182 63.7
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 2.2e-59 233.4 200 59.0
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 2.2e-59 233.4 247 53.0
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 2.2e-59 233.4 235 57.9
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 3.7e-59 232.6 237 52.3
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 6.4e-59 231.9 236 55.5
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 6.4e-59 231.9 185 64.9
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 1.4e-58 230.7 165 70.9
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 1.9e-58 230.3 174 66.1
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 3.2e-58 229.6 217 58.1
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 4.1e-58 229.2 200 58.5
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 4.1e-58 229.2 200 58.5
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 7.0e-58 228.4 188 61.7
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 1.6e-57 227.3 209 59.3
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 1.6e-57 227.3 188 61.7
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 1.6e-57 227.3 170 65.3
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.6e-57 227.3 176 64.2
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 2.0e-57 226.9 229 56.8
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.7e-57 226.5 188 60.6
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 3.5e-57 226.1 188 60.6
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 4.6e-57 225.7 154 70.8
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 6.0e-57 225.3 282 49.6
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 2.3e-56 223.4 171 66.1
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 5.0e-56 222.2 247 51.4
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 1.2e-54 217.6 183 66.1
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 2.8e-54 216.5 130 78.5
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 6.2e-54 215.3 140 73.6
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 8.0e-54 214.9 186 58.6
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.1e-53 214.5 216 62.0
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 3.1e-53 213.0 224 51.8
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 4.0e-53 212.6 216 54.2
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 1.5e-52 210.7 205 56.6
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 2.0e-52 210.3 234 51.3
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 6.4e-51 205.3 167 59.9
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 4.1e-50 202.6 176 60.2
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 9.2e-50 201.4 207 58.5
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 1.6e-49 200.7 141 63.8
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 1.7e-48 197.2 160 63.1
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 1.4e-45 187.6 145 68.3
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 1.8e-45 187.2 165 64.8
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 8.3e-43 178.3 210 52.9
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.1e-42 177.9 129 69.0
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 1.1e-42 177.9 149 57.0
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.1e-41 173.7 167 59.9
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-40 171.0 191 52.9
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 3.0e-40 169.9 185 53.5
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 5.1e-40 169.1 198 50.5
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 5.1e-40 169.1 141 53.9
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 3.3e-39 166.4 144 55.6
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 7.1e-34 148.7 112 67.9
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 6.0e-33 145.6 83 80.7
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.7e-32 144.1 82 81.7
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.3e-27 127.9 154 53.2
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 5.4e-26 122.5 155 53.5
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.9e-18 97.4 158 43.7
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 9.0e-13 78.6 50 70.0
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 9.0e-13 78.6 136 31.6
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 9.0e-13 78.6 189 35.4
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 3.9e-08 63.2 129 26.4
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 3.7e-06 56.6 119 37.0


User provided reference genes

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