Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 6.4e-87 324.3 198 100.0
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.3e-76 290.0 198 90.9
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 5.5e-70 268.1 198 84.3
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 2.6e-56 222.6 189 77.8
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 1.3e-55 220.3 199 73.4
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.9e-54 216.5 190 76.3
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.5e-54 216.1 181 79.0
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 7.2e-54 214.5 191 73.8
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 4.6e-53 211.8 199 72.9
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.3e-52 210.3 190 73.7
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 2.3e-52 209.5 198 71.2
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 2.3e-52 209.5 196 73.0
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 5.1e-52 208.4 197 71.6
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 5.1e-52 208.4 202 70.3
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 6.7e-52 208.0 184 75.0
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.5e-51 206.8 194 72.7
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 1.9e-51 206.5 190 72.6
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 2.5e-51 206.1 199 70.9
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 2.5e-51 206.1 199 70.9
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 2.5e-51 206.1 181 75.1
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 2.5e-51 206.1 181 75.1
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 4.3e-51 205.3 190 70.5
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 7.4e-51 204.5 193 70.5
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 7.4e-51 204.5 196 70.4
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 9.7e-51 204.1 189 70.4
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.3e-50 203.8 199 69.8
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.3e-50 203.8 177 76.3
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 1.6e-50 203.4 160 81.9
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 1.6e-50 203.4 193 69.4
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 6.3e-50 201.4 200 68.5
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 6.3e-50 201.4 188 73.4
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 8.2e-50 201.1 200 68.5
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 8.2e-50 201.1 200 68.5
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 1.1e-49 200.7 157 80.9
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 1.1e-49 200.7 201 69.2
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.4e-49 200.3 205 66.8
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.4e-49 200.3 205 66.8
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 2.4e-49 199.5 189 72.0
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 3.1e-49 199.1 199 68.8
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 3.1e-49 199.1 188 70.7
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 4.1e-49 198.7 160 80.6
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 4.1e-49 198.7 200 68.5
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 5.3e-49 198.4 205 65.9
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 6.9e-49 198.0 200 70.0
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 6.9e-49 198.0 180 73.3
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 6.9e-49 198.0 159 81.1
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 6.9e-49 198.0 154 82.5
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.2e-48 197.2 190 71.6
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.6e-48 196.1 181 71.8
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.4e-48 195.7 204 66.7
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 4.5e-48 195.3 197 68.0
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 4.5e-48 195.3 199 65.8
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 4.5e-48 195.3 154 83.1
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 5.9e-48 194.9 196 66.8
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.7e-47 193.4 178 71.9
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 2.2e-47 193.0 151 83.4
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 2.2e-47 193.0 147 85.7
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 5.0e-47 191.8 198 66.7
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 5.0e-47 191.8 178 71.3
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 5.0e-47 191.8 167 74.9
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 6.5e-47 191.4 166 74.1
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 6.5e-47 191.4 200 68.5
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 6.5e-47 191.4 199 68.8
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 6.5e-47 191.4 166 74.7
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 8.5e-47 191.0 158 76.6
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 8.5e-47 191.0 182 70.9
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 1.1e-46 190.7 194 64.9
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 1.1e-46 190.7 198 66.2
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.1e-46 190.7 159 79.2
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 1.4e-46 190.3 190 67.9
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 1.9e-46 189.9 181 69.1
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 3.2e-46 189.1 165 75.8
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 5.5e-46 188.3 159 79.2
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 7.2e-46 188.0 149 82.6
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 1.2e-45 187.2 190 68.9
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 3.6e-45 185.7 166 74.1
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 4.6e-45 185.3 200 67.0
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 6.1e-45 184.9 165 73.9
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 1.4e-44 183.7 195 64.6
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 3.0e-44 182.6 180 67.8
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 3.9e-44 182.2 148 79.1
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 5.1e-44 181.8 198 63.6
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 5.1e-44 181.8 198 64.1
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 8.8e-44 181.0 166 71.1
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 8.8e-44 181.0 166 71.1
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 1.5e-43 180.3 165 72.7
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 2.0e-43 179.9 189 65.1
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 4.3e-43 178.7 149 79.2
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 5.7e-43 178.3 164 72.0
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 1.7e-42 176.8 156 74.4
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 4.8e-42 175.3 159 72.3
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 6.3e-42 174.9 201 61.7
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 6.3e-42 174.9 183 66.7
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 6.3e-42 174.9 156 75.0
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.4e-41 173.7 188 62.8
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 1.8e-41 173.3 165 70.9
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 6.9e-41 171.4 189 64.0
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 2.0e-40 169.9 169 67.5
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 3.4e-40 169.1 188 64.9
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 2.2e-39 166.4 174 64.9
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 8.5e-39 164.5 134 81.3
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 1.4e-38 163.7 190 63.7
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 2.7e-37 159.5 157 70.1
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.0e-36 157.5 190 60.5
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 2.2e-34 149.8 198 53.5
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 4.1e-33 145.6 195 55.4
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.7e-31 140.2 181 58.0
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 1.4e-25 120.6 194 49.5
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 5.3e-25 118.6 86 67.4
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.2e-23 113.2 162 52.5
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 2.5e-22 109.8 196 49.0
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 8.0e-21 104.8 157 53.5
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 5.2e-20 102.1 102 54.9
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 5.2e-20 102.1 140 57.9
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 1.5e-19 100.5 127 52.8
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 5.7e-19 98.6 146 54.1
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 7.5e-19 98.2 110 59.1
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 6.3e-18 95.1 156 50.0
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.1e-17 94.4 113 61.9
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 8.8e-12 74.7 111 54.1
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.8e-10 69.7 75 46.7


User provided reference genes

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