Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0080300 Salix brachista HOM05D008866 ORTHO05D010297 1.2e-47 193.0 109 100.0
Sabra15G0080500 Salix brachista HOM05D008866 ORTHO05D010297 1.2e-47 193.0 109 100.0
Sabra02G0075800 Salix brachista HOM05D008866 ORTHO05D010297 1.7e-41 172.6 109 92.7
Potri.002G096200 Populus trichocarpa HOM05D008866 ORTHO05D010297 1.2e-37 159.8 109 86.2
Manes.02G152900 Manihot esculenta HOM05D008866 ORTHO05D010297 2.8e-23 112.1 97 67.0
Haze_22264 Corylus avellana HOM05D008866 ORTHO05D010297 6.1e-23 110.9 97 61.9
Cfa013632 Carpinus fangiana HOM05D008866 ORTHO05D010297 5.2e-22 107.8 96 61.5
ClCG11G015280 Citrullus lanatus HOM05D008866 ORTHO05D010297 3.4e-21 105.1 96 58.3
MD15G1368300 Malus domestica HOM05D008866 ORTHO05D010297 2.7e-18 95.5 99 56.6
TWI56G1012 Tripterygium wilfordii HOM05D008866 ORTHO05D010297 5.9e-18 94.4 97 60.8
Prupe.1G516500 Prunus persica HOM05D008866 ORTHO05D010297 1.0e-17 93.6 98 59.2
Sed0013679 Sechium edule HOM05D008866 ORTHO05D010297 1.5e-16 89.7 96 53.1
Atru.chr13.1192 Acer truncatum HOM05D008866 ORTHO05D010297 1.9e-16 89.4 101 51.5
Atru.chr13.1195 Acer truncatum HOM05D008866 ORTHO05D010297 1.9e-16 89.4 101 51.5
CsaV3_3G048700 Cucumis sativus L. HOM05D008866 ORTHO05D010297 1.9e-16 89.4 95 54.7
MELO3C003451.2 Cucumis melo HOM05D008866 ORTHO05D010297 2.5e-16 89.0 91 56.0
CiPaw.08G045000 Carya illinoinensis HOM05D008866 ORTHO05D010297 5.6e-16 87.8 89 59.6
Ciclev10003721m.g Citrus clementina HOM05D008866 ORTHO05D010297 4.7e-15 84.7 99 55.6
QL12p036746 Quercus lobata HOM05D008866 ORTHO05D010297 3.0e-14 82.0 100 52.0
Thecc.08G107100 Theobroma cacao HOM05D008866 ORTHO05D010297 4.0e-14 81.6 96 52.1
MBI05_g19348_MAGBIO Magnolia biondii HOM05D008866 ORTHO05D010297 2.0e-13 79.3 102 46.1
Dinv44772 Davidia involucrata HOM05D008866 ORTHO05D010297 1.3e-12 76.6 99 49.5
Actinidia10320 Actinidia chinensis HOM05D008866 ORTHO05D010297 8.3e-12 73.9 100 46.0
Gorai.009G281500 Gossypium raimondii HOM05D008866 ORTHO05D010297 1.4e-11 73.2 92 51.1
Gohir.D05G268900 Gossypium hirsutum HOM05D008866 ORTHO05D010297 1.9e-11 72.8 92 51.1
Gohir.A05G226600 Gossypium hirsutum HOM05D008866 ORTHO05D010297 5.4e-11 71.2 100 45.0
Sc01g0001900 Simmondsia chinensis HOM05D008866 ORTHO05D010297 5.4e-11 71.2 95 49.5
Gohir.D05G229300 Gossypium hirsutum HOM05D008866 ORTHO05D010297 7.0e-11 70.9 100 45.0
Gorai.009G237300 Gossypium raimondii HOM05D008866 ORTHO05D010297 7.0e-11 70.9 100 45.0
Solyc04g074110.4 Solanum lycopersicum HOM05D001213 ORTHO05D001042 2.7e-10 68.9 92 44.6
THA.LOC104810815 Tarenaya hassleriana HOM05D011728 ORTHO05D010297 4.6e-10 68.2 99 47.5
Sopen04g028620 Solanum pennellii HOM05D001213 ORTHO05D001042 6.0e-10 67.8 92 43.5
Gohir.A05G267250 Gossypium hirsutum HOM05D008866 ORTHO05D010297 7.8e-10 67.4 92 50.0
Carub.0002s2507 Capsella rubella HOM05D011728 ORTHO05D010297 1.0e-09 67.0 99 49.5
FAN04G1213 Fragaria x ananassa HOM05D024166 ORTHO05D010297 1.7e-09 66.2 93 52.7
AT1G78172 Arabidopsis thaliana HOM05D011728 ORTHO05D010297 2.3e-09 65.9 99 48.5
Rhsim06G0082400 Rhododendron simsii HOM05D008866 ORTHO05D010297 2.3e-09 65.9 123 38.2
Sp5g33300 Schrenkiella parvula HOM05D011728 ORTHO05D010297 2.3e-09 65.9 99 46.5
Sc26g0000070 Simmondsia chinensis HOM05D008866 ORTHO05D010297 3.0e-09 65.5 101 44.6
FvH4_5g37350 Fragaria vesca HOM05D024166 ORTHO05D010297 6.6e-09 64.3 98 50.0
FAN18G4257 Fragaria x ananassa HOM05D024166 ORTHO05D010297 8.6e-09 63.9 98 50.0
Nn5g30115 Nelumbo nucifera HOM05D008866 ORTHO05D010297 1.5e-08 63.2 93 41.9
RcHm_v2.0_Chr7g0239021 Rosa chinensis HOM05D024166 ORTHO05D010297 1.9e-08 62.8 106 44.3
AL2G38490 Arabidopsis lyrata HOM05D011728 ORTHO05D010297 2.5e-08 62.4 99 47.5
FAN13G0298 Fragaria x ananassa HOM05D024166 ORTHO05D010297 3.3e-08 62.0 98 48.0
Oeu012924.1 Olea europaea HOM05D008866 ORTHO05D010297 4.3e-08 61.6 93 47.3
CARHR071640 Cardamine hirsuta HOM05D011728 ORTHO05D010297 7.3e-08 60.8 82 50.0
CANSAT80G2405 Cannabis sativa HOM05D008866 ORTHO05D010297 9.5e-08 60.5 97 45.4
SHI26682 Sapria himalayana HOM05D008866 ORTHO05D010297 6.2e-07 57.8 96 40.6
Thhalv10019357m.g Eutrema salsugineum HOM05D011728 ORTHO05D010297 8.0e-07 57.4 97 44.3
Lalb_Chr10g0102371 Lupinus albus HOM05D021507 ORTHO05D010297 8.0e-07 57.4 98 42.9
vmacro21272 Vaccinium macrocarpon HOM05D008866 ORTHO05D010297 1.1e-06 57.0 100 38.0
arahy.Tifrunner.gnm1.ann1.95U36S Arachis hypogaea HOM05D021507 ORTHO05D010297 1.4e-06 56.6 100 39.0
arahy.Tifrunner.gnm1.ann1.F7T4NN Arachis hypogaea HOM05D021507 ORTHO05D010297 1.4e-06 56.6 100 39.0
Sopen04g029290 Solanum pennellii HOM05D001213 ORTHO05D001042 1.8e-06 56.2 70 44.3


User provided reference genes

Program Settings