Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 2.3e-78 295.4 145 100.0
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 2.1e-42 176.0 101 89.1
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 6.7e-25 117.9 103 60.2
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 3.1e-22 109.0 98 58.2
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 3.1e-22 109.0 98 58.2
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 9.0e-22 107.5 106 52.8
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 4.5e-21 105.1 102 54.9
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 7.6e-21 104.4 103 54.4
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 7.6e-21 104.4 100 52.0
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 7.6e-21 104.4 102 53.9
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 3.8e-20 102.1 101 55.4
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 4.9e-20 101.7 100 55.0
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 1.1e-19 100.5 96 56.2
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 1.4e-19 100.1 98 56.1
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.9e-19 99.8 98 55.1
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 2.5e-19 99.4 102 52.9
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 2.5e-19 99.4 99 53.5
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 5.5e-19 98.2 98 53.1
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 5.5e-19 98.2 98 54.1
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 7.1e-19 97.8 101 51.5
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 1.2e-18 97.1 99 51.5
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 1.6e-18 96.7 96 56.2
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.1e-18 96.3 105 48.6
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 6.0e-18 94.7 111 47.7
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.3e-17 93.6 103 47.6
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 1.3e-17 93.6 100 51.0
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 2.3e-17 92.8 100 51.0
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 3.0e-17 92.4 100 51.0
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 3.0e-17 92.4 97 50.5
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.9e-17 92.0 98 50.0
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.1e-16 90.5 100 51.0
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.5e-16 90.1 104 49.0
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 2.5e-16 89.4 96 52.1
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 3.3e-16 89.0 102 48.0
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 5.7e-16 88.2 104 48.1
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 9.7e-16 87.4 100 50.0
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 2.8e-15 85.9 111 45.9
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 3.7e-15 85.5 93 48.4
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 6.3e-15 84.7 103 46.6
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 6.3e-15 84.7 97 49.5
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 8.2e-15 84.3 100 47.0
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 1.1e-14 84.0 96 50.0
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.4e-14 83.6 104 48.1
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 1.8e-14 83.2 93 48.4
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 2.4e-14 82.8 93 46.2
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 2.4e-14 82.8 99 47.5
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 3.1e-14 82.4 131 43.5
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 3.1e-14 82.4 95 45.3
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 1.2e-13 80.5 101 44.6
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 2.0e-13 79.7 100 41.0
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 3.4e-13 79.0 92 45.7
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 3.4e-13 79.0 98 41.8
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.0e-12 77.4 92 44.6
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 1.3e-12 77.0 98 41.8
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 2.2e-12 76.3 94 42.6
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 5.0e-12 75.1 93 46.2
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 5.0e-12 75.1 69 56.5
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 5.0e-12 75.1 69 56.5
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 1.4e-11 73.6 104 42.3
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 2.5e-11 72.8 93 43.0
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 2.5e-11 72.8 93 43.0
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 2.5e-11 72.8 93 43.0
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 3.2e-11 72.4 93 44.1
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 3.2e-11 72.4 93 44.1
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 3.2e-11 72.4 101 42.6
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 5.5e-11 71.6 102 41.2
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.2e-10 70.5 82 45.1
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.6e-10 70.1 92 42.4
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 1.0e-09 67.4 101 39.6
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 5.1e-09 65.1 101 37.6
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 8.8e-09 64.3 91 41.8
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 7.4e-08 61.2 95 38.9
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 2.8e-07 59.3 101 35.6


User provided reference genes

Program Settings