Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0068100 Salix brachista HOM05D001081 ORTHO05D004708 1.9e-195 685.6 348 100.0
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 2.7e-189 665.2 342 98.8
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 1.1e-118 430.6 311 68.8
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 1.9e-118 429.9 310 68.4
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 2.3e-116 422.9 313 67.7
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 2.0e-115 419.9 340 62.6
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 1.4e-113 413.7 309 66.7
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 3.5e-112 409.1 311 66.9
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 5.9e-112 408.3 310 64.8
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 3.8e-111 405.6 310 65.2
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 5.0e-111 405.2 310 64.8
Eucgr.G00143 Eucalyptus grandis HOM05D001081 ORTHO05D004708 6.6e-111 404.8 311 62.7
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.9e-110 403.3 310 65.2
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 3.3e-110 402.5 310 64.8
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 4.7e-109 398.7 336 63.1
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 4.7e-109 398.7 320 63.4
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 6.1e-109 398.3 311 65.0
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 1.0e-108 397.5 337 60.8
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 8.9e-108 394.4 310 64.2
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 8.9e-108 394.4 337 60.5
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 5.7e-107 391.7 304 64.1
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 7.5e-107 391.3 310 64.2
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 9.8e-107 391.0 310 62.9
Ca_12791_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 6.4e-106 388.3 311 64.6
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 6.4e-106 388.3 310 62.6
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 1.1e-105 387.5 309 63.4
Eucgr.G00111 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.4e-105 386.3 311 60.8
Eucgr.H05016 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.7e-104 382.9 311 60.1
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 3.5e-104 382.5 308 62.0
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 3.5e-104 382.5 309 63.4
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 4.6e-104 382.1 299 64.2
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 1.0e-103 380.9 310 63.2
Eucgr.G00092 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.5e-102 377.1 311 59.8
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 2.1e-101 373.2 312 62.5
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 1.0e-100 370.9 309 63.1
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.0e-100 370.9 274 68.6
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 8.9e-100 367.9 340 56.5
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 1.2e-99 367.5 312 60.6
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 2.0e-99 366.7 309 61.8
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 4.4e-99 365.5 307 59.9
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 1.7e-98 363.6 310 58.1
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 6.4e-98 361.7 315 59.7
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 8.3e-98 361.3 310 57.7
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 8.3e-98 361.3 310 57.7
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 1.1e-97 360.9 368 52.2
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 1.4e-97 360.5 422 49.5
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 1.9e-97 360.1 310 60.3
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 1.9e-97 360.1 311 61.4
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 7.0e-97 358.2 312 59.0
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 1.6e-96 357.1 311 59.5
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 4.6e-96 355.5 312 59.6
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 4.6e-96 355.5 312 58.3
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 1.7e-95 353.6 334 56.9
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 2.3e-95 353.2 312 59.3
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 2.3e-95 353.2 312 59.3
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 2.3e-95 353.2 312 59.3
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 6.6e-95 351.7 311 57.2
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 1.5e-94 350.5 339 55.2
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 1.9e-94 350.1 310 58.4
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 1.9e-94 350.1 311 56.9
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 9.5e-94 347.8 315 58.1
Medtr1g007950 Medicago truncatula HOM05D001081 ORTHO05D004708 1.2e-93 347.4 312 59.0
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 2.1e-93 346.7 310 59.7
Hma1.2p1_0404F.1_g145340 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 2.8e-93 346.3 281 63.0
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 3.6e-93 345.9 313 58.8
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 6.2e-93 345.1 311 57.9
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 8.1e-93 344.7 311 58.2
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 3.1e-92 342.8 337 55.2
Cpa.g.sc3.91 Carica papaya HOM05D001081 ORTHO05D004708 6.8e-92 341.7 282 64.5
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 1.7e-90 337.0 316 55.4
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 7.1e-89 331.6 213 77.9
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 4.3e-86 322.4 310 54.8
HanXRQChr08g0225341 Helianthus annuus HOM05D001081 ORTHO05D004708 9.5e-86 321.2 330 54.2
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 2.6e-83 313.2 341 51.3
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 5.8e-83 312.0 312 53.2
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 1.3e-79 300.8 312 53.2
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 3.0e-79 299.7 209 73.2
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 3.0e-79 299.7 212 70.8
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 3.9e-79 299.3 318 51.3
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 8.1e-77 291.6 205 73.2
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 8.1e-77 291.6 205 73.2
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 1.3e-74 284.3 206 67.0
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 1.4e-73 280.8 212 65.6
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 1.9e-73 280.4 417 42.7
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 5.4e-73 278.9 326 48.5
TWI39G0245 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 6.0e-72 275.4 211 65.4
CARHR189250 Cardamine hirsuta HOM05D001081 ORTHO05D004708 1.5e-67 260.8 310 45.5
Aa31LG11G3510 Aethionema arabicum HOM05D001081 ORTHO05D004708 2.6e-67 260.0 229 60.3
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 6.4e-66 255.4 306 49.3
SGA_v2.0_scaffold9G04846 Striga asiatica HOM05D001081 ORTHO05D004708 1.4e-60 237.7 201 63.7
HanXRQChr10g0291811 Helianthus annuus HOM05D001081 ORTHO05D004708 6.9e-60 235.3 182 67.0
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 7.6e-59 231.9 178 64.0
Hma1.2p1_0404F.1_g145380 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 9.9e-59 231.5 203 59.6
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 1.2e-56 224.6 158 68.4
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 8.1e-53 211.8 326 41.4
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 2.4e-52 210.3 301 42.5
Gohir.D11G256700 Gossypium hirsutum HOM05D001081 ORTHO05D010708 4.5e-51 206.1 142 71.1
Gorai.010G233200 Gossypium raimondii HOM05D001081 ORTHO05D010708 3.2e-49 199.9 142 69.7
Potri.012G016100 Populus trichocarpa HOM05D001081 ORTHO05D004708 8.7e-47 191.8 102 92.2
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 2.5e-46 190.3 179 53.6
Mapoly0111s0028 Marchantia polymorpha HOM05D001081 ORTHO05D004708 4.8e-45 186.0 321 39.6
SMO213G0001 Selaginella moellendorffii HOM05D001081 ORTHO05D004708 1.5e-43 181.0 266 41.7
PSO170G6091 Papaver somniferum HOM05D001081 ORTHO05D004708 4.5e-43 179.5 182 52.2
Nitab4.5_0006933g0040 Nicotiana tabacum HOM05D001081 ORTHO05D004708 2.5e-41 173.7 180 52.2
AagrBONN_evm.TU.Sc2ySwM_117.3719 Anthoceros agrestis HOM05D001081 ORTHO05D004708 9.3e-41 171.8 334 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1615 Anthoceros agrestis HOM05D001081 ORTHO05D004708 6.1e-40 169.1 334 36.2
FvH4_7g31511 Fragaria vesca HOM05D001081 ORTHO05D004708 7.4e-38 162.2 161 51.6
Gorai.011G131700 Gossypium raimondii HOM05D001081 ORTHO05D004708 1.1e-33 148.3 107 68.2
AL6G35700 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 3.6e-32 143.3 132 59.8
COL.COLO4_16768 Corchorus olitorius HOM05D001081 ORTHO05D004708 8.8e-31 138.7 107 65.4
Carub.0006s2204 Capsella rubella HOM05D001081 ORTHO05D024756 1.0e-26 125.2 139 43.9
TWI39G0445 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 1.3e-26 124.8 92 66.3
Solyc03g083120.3 Solanum lycopersicum HOM05D001081 ORTHO05D024756 2.2e-26 124.0 134 49.3
Peaxi162Scf00740g00140 Petunia axillaris HOM05D001081 ORTHO05D024756 6.5e-26 122.5 151 47.7
Migut.F00208 Erythranthe guttata HOM05D001081 ORTHO05D004708 5.2e-23 112.8 133 42.1
Actinidia04725 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.6e-22 110.5 71 73.2
Sopen03g019380 Solanum pennellii HOM05D001081 ORTHO05D029255 2.6e-22 110.5 131 47.3
Aqoxy4G01594 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 8.2e-21 105.5 260 31.9
Actinidia27675 Actinidia chinensis HOM05D001081 ORTHO05D004708 1.8e-20 104.4 71 70.4
SEGI_15117 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 8.5e-18 95.5 151 35.8
Pp3c22_17807 Physcomitrium patens HOM05D001081 ORTHO05D004708 7.2e-17 92.4 133 36.8
Actinidia04689 Actinidia chinensis HOM05D001081 ORTHO05D004708 3.0e-15 87.0 59 71.2
Hma1.2p1_0013F.1_g008960 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 3.3e-14 83.6 47 80.9
Lsat_1_v5_gn_9_3381 Lactuca sativa HOM05D001081 ORTHO05D004708 5.7e-14 82.8 75 58.7
Lalb_Chr10g0091351 Lupinus albus HOM05D001081 ORTHO05D004708 2.8e-13 80.5 104 44.2
Dinv08524 Davidia involucrata HOM05D001081 ORTHO05D004708 2.2e-10 70.9 132 39.4
Lsat_1_v5_gn_6_63561 Lactuca sativa HOM05D001081 ORTHO05D004708 3.8e-10 70.1 58 63.8
Pp3c8_21182 Physcomitrium patens HOM05D001081 ORTHO05D004708 3.2e-09 67.0 212 32.5
EL10Ac2g04588 Beta vulgaris HOM05D001081 ORTHO05D004708 2.7e-08 63.9 61 54.1
AUR62000987 Chenopodium quinoa HOM05D001081 ORTHO05D004708 2.7e-08 63.9 44 75.0
HanXRQChr06g0165641 Helianthus annuus HOM05D001081 ORTHO05D024756 1.2e-06 58.5 66 48.5
HanXRQChr08g0231511 Helianthus annuus HOM05D001081 ORTHO05D024756 1.2e-06 58.5 66 48.5


User provided reference genes

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