Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 4.3e-164 581.3 291 100.0
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.4e-135 486.5 291 87.6
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 2.8e-131 472.2 291 84.9
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 2.8e-115 419.1 283 76.3
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 1.3e-96 357.1 281 65.8
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 6.5e-96 354.8 279 64.9
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 6.5e-96 354.8 291 63.9
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 1.1e-95 354.0 279 64.9
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.2e-94 350.5 280 65.4
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 2.1e-94 349.7 285 62.5
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 3.6e-94 349.0 290 64.1
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 4.7e-94 348.6 290 64.5
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 4.7e-94 348.6 290 64.5
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 4.7e-94 348.6 288 62.8
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.0e-93 347.4 285 62.1
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 1.4e-93 347.1 290 64.1
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 1.8e-93 346.7 286 64.0
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.0e-93 345.9 287 65.2
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 6.7e-93 344.7 279 63.4
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 9.7e-92 340.9 279 63.8
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 1.7e-91 340.1 286 61.9
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.2e-91 339.7 279 63.4
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 3.7e-91 339.0 282 64.5
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 3.7e-91 339.0 288 62.2
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 6.3e-91 338.2 274 65.7
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 1.1e-90 337.4 282 62.4
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.1e-90 337.4 285 63.5
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 1.8e-90 336.7 284 63.7
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 2.4e-90 336.3 283 60.4
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 2.4e-90 336.3 287 59.9
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 5.3e-90 335.1 287 59.6
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 5.3e-90 335.1 279 63.1
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 7.0e-90 334.7 286 60.5
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 7.0e-90 334.7 286 60.5
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 7.0e-90 334.7 283 61.1
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-89 333.6 286 60.1
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 1.6e-89 333.6 286 60.5
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 2.0e-89 333.2 278 60.1
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 2.0e-89 333.2 286 60.5
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 2.0e-89 333.2 289 62.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 2.6e-89 332.8 283 59.7
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 2.6e-89 332.8 283 59.7
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 4.5e-89 332.0 279 60.2
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 4.5e-89 332.0 279 59.9
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 7.7e-89 331.3 282 63.1
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 7.7e-89 331.3 283 59.4
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 1.0e-88 330.9 279 59.9
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 1.7e-88 330.1 284 63.0
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 2.2e-88 329.7 286 62.2
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 2.2e-88 329.7 284 61.3
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 2.9e-88 329.3 280 60.0
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 6.5e-88 328.2 288 60.8
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 8.5e-88 327.8 288 58.7
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 8.5e-88 327.8 284 61.6
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.9e-87 326.6 280 59.3
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.5e-87 326.2 280 61.1
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 4.2e-87 325.5 280 62.9
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 5.5e-87 325.1 282 61.7
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 1.2e-86 323.9 279 62.7
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 2.7e-86 322.8 287 60.6
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 2.7e-86 322.8 287 60.6
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 6.1e-86 321.6 282 61.3
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 8.0e-86 321.2 287 59.6
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 5.2e-85 318.5 282 59.6
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 5.2e-85 318.5 293 57.3
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 8.8e-85 317.8 283 59.0
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.5e-84 317.0 284 60.6
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 3.3e-84 315.8 283 61.1
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 4.4e-84 315.5 289 60.2
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 4.4e-84 315.5 287 59.2
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 7.5e-84 314.7 288 58.3
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 9.7e-84 314.3 291 57.4
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 9.7e-84 314.3 286 58.4
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.3e-83 313.9 269 63.6
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 2.8e-83 312.8 275 61.1
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 4.8e-83 312.0 267 59.9
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 1.8e-82 310.1 283 59.7
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 7.0e-82 308.1 283 59.4
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 2.0e-81 306.6 280 60.0
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 2.7e-81 306.2 280 59.6
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 1.0e-80 304.3 267 62.9
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 2.2e-80 303.1 271 61.3
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 2.9e-80 302.8 279 58.4
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 8.5e-80 301.2 280 58.2
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 4.2e-79 298.9 277 57.8
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 7.2e-79 298.1 285 57.2
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 6.1e-78 295.0 322 53.4
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 8.0e-78 294.7 285 57.2
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 5.2e-77 292.0 276 56.5
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 2.2e-75 286.6 277 56.0
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 4.8e-75 285.4 281 55.9
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 4.1e-74 282.3 281 56.9
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 7.0e-74 281.6 231 64.1
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 2.7e-73 279.6 257 58.0
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 2.3e-72 276.6 278 55.4
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.1e-71 274.2 274 53.3
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 4.2e-71 272.3 286 53.8
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 7.2e-71 271.6 274 55.1
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 2.3e-69 266.5 224 62.1
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 5.2e-69 265.4 281 51.6
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 3.4e-68 262.7 288 53.5
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.4e-68 262.3 285 53.0
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 7.5e-68 261.5 265 53.2
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 2.2e-67 260.0 231 60.6
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 3.7e-67 259.2 285 52.6
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.8e-66 256.9 281 53.7
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 4.1e-66 255.8 210 64.8
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 5.9e-65 251.9 275 52.4
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 3.9e-64 249.2 243 58.8
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 4.0e-61 239.2 268 48.1
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 3.4e-60 236.1 293 49.5
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 4.9e-59 232.3 270 47.4
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 1.9e-55 220.3 267 44.9
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 7.5e-52 208.4 199 56.8
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 9.8e-52 208.0 140 76.4
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 3.9e-48 196.1 140 72.1
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 1.4e-45 187.6 253 43.9
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.3e-43 181.0 173 57.2
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.9e-43 179.1 193 48.7
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 9.2e-42 174.9 136 65.4
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 1.3e-40 171.0 269 36.4
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.3e-24 117.1 83 71.1
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 8.7e-24 115.2 82 69.5
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 1.1e-23 114.8 261 31.4
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 3.3e-23 113.2 79 70.9
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 3.3e-23 113.2 79 70.9
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 9.6e-23 111.7 265 31.3
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 9.6e-23 111.7 83 67.5
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 7.4e-15 85.5 64 70.3
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 1.8e-13 80.9 58 63.8
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 1.6e-06 57.8 47 57.4
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 6.2e-06 55.8 45 55.6


User provided reference genes

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