Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0038600 Salix brachista HOM05D015243 ORTHO05D023094 6.3e-27 124.8 64 100.0
Sabra15G0057500 Salix brachista HOM05D015243 ORTHO05D023094 2.0e-25 119.8 64 95.3
Sabra15G0070600 Salix brachista HOM05D015243 ORTHO05D023094 2.9e-24 115.9 64 93.8
Potri.015G039500 Populus trichocarpa HOM05D015243 ORTHO05D023094 1.0e-21 107.5 64 82.8
Potri.012G048200 Populus trichocarpa HOM05D015243 ORTHO05D023094 6.7e-13 78.2 57 68.4
Sabra12G0033700 Salix brachista HOM05D015243 ORTHO05D023094 9.1e-10 67.8 57 64.9
A08p30490 Brassica napus HOM05D000135 ORTHO05D000203 7.7e-09 64.7 60 55.0
BraA08t34981Z Brassica rapa HOM05D000135 ORTHO05D000203 7.7e-09 64.7 60 55.0
Manes.14G170600 Manihot esculenta HOM05D000135 ORTHO05D000203 1.3e-08 63.9 66 56.1
Sp1g16200 Schrenkiella parvula HOM05D000135 ORTHO05D000203 3.8e-08 62.4 62 54.8
Aa31LG7G2860 Aethionema arabicum HOM05D000135 ORTHO05D000203 5.0e-08 62.0 60 48.3
Thecc.03G053900 Theobroma cacao HOM05D000135 ORTHO05D000203 1.1e-07 60.8 63 49.2
BcaC08g46783 Brassica carinata HOM05D000135 ORTHO05D000203 1.9e-07 60.1 57 54.4
A07p39510 Brassica napus HOM05D000135 ORTHO05D000203 1.9e-07 60.1 57 54.4
C06p47750 Brassica napus HOM05D000135 ORTHO05D000203 1.9e-07 60.1 57 54.4
BolC6t39813H Brassica oleracea HOM05D000135 ORTHO05D000203 1.9e-07 60.1 57 54.4
AT1G18210 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 2.5e-07 59.7 60 51.7
BcaC07g38900 Brassica carinata HOM05D000135 ORTHO05D000203 2.5e-07 59.7 60 51.7
AL1G30580 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 3.2e-07 59.3 60 50.0
AL2G33410 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 3.2e-07 59.3 56 51.8
Carub.0002s2037 Capsella rubella HOM05D000135 ORTHO05D000203 3.2e-07 59.3 57 50.9
CARHR018790 Cardamine hirsuta HOM05D000135 ORTHO05D000203 3.2e-07 59.3 60 51.7
Duzib205G0108 Durio zibethinus HOM05D000135 ORTHO05D000203 3.2e-07 59.3 60 50.0
Phvul.002G329300 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 3.2e-07 59.3 57 54.4
Carub.0001s1785 Capsella rubella HOM05D000135 ORTHO05D000203 4.2e-07 58.9 60 50.0
C08p18480 Brassica napus HOM05D000135 ORTHO05D000203 7.2e-07 58.2 60 50.0
BolC8t49480H Brassica oleracea HOM05D000135 ORTHO05D000203 7.2e-07 58.2 60 50.0
BraA07t31499Z Brassica rapa HOM05D000135 ORTHO05D000203 7.2e-07 58.2 57 52.6
Cpa.g.sc3.406 Carica papaya HOM05D000135 ORTHO05D000203 9.4e-07 57.8 64 50.0
Thhalv10008945m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 1.2e-06 57.4 51 51.0
Hma1.2p1_0669F.1_g200160 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.2e-06 57.4 62 46.8
Atru.chr9.1744 Acer truncatum HOM05D000135 ORTHO05D000203 1.6e-06 57.0 61 50.8
THA.LOC104812167 Tarenaya hassleriana HOM05D000135 ORTHO05D000203 1.6e-06 57.0 61 54.1
BcaB03g15068 Brassica carinata HOM05D000135 ORTHO05D000203 2.1e-06 56.6 57 50.9
A06p14250 Brassica napus HOM05D000135 ORTHO05D000203 2.1e-06 56.6 60 48.3
C05p16510 Brassica napus HOM05D000135 ORTHO05D000203 2.1e-06 56.6 60 48.3
Manes.06G007600 Manihot esculenta HOM05D000135 ORTHO05D000203 2.1e-06 56.6 52 53.8
SpUn0647_0010 Schrenkiella parvula HOM05D000135 ORTHO05D000203 2.1e-06 56.6 48 56.2
BraA06t24554Z Brassica rapa HOM05D000135 ORTHO05D000203 2.7e-06 56.2 51 51.0
Medtr8g107110 Medicago truncatula HOM05D015243 ORTHO05D000203 2.7e-06 56.2 54 53.7
VMungo0251G3734 Vigna mungo HOM05D000135 ORTHO05D000203 2.7e-06 56.2 59 55.9
BcaB07g31819 Brassica carinata HOM05D000135 ORTHO05D000203 3.6e-06 55.8 60 46.7
BcaB07g31820 Brassica carinata HOM05D000135 ORTHO05D000203 3.6e-06 55.8 60 46.7
BcaC05g25716 Brassica carinata HOM05D000135 ORTHO05D000203 3.6e-06 55.8 60 46.7
BolC5t30348H Brassica oleracea HOM05D000135 ORTHO05D000203 3.6e-06 55.8 60 46.7
COL.COLO4_30130 Corchorus olitorius HOM05D000135 ORTHO05D000203 3.6e-06 55.8 56 50.0
COL.COLO4_35380 Corchorus olitorius HOM05D000135 ORTHO05D000203 3.6e-06 55.8 56 50.0
Haze_18836 Corylus avellana HOM05D000135 ORTHO05D000203 3.6e-06 55.8 56 50.0
CARHR066680 Cardamine hirsuta HOM05D000135 ORTHO05D000203 4.7e-06 55.5 56 50.0
Duzib138G0999 Durio zibethinus HOM05D003685 ORTHO05D003168 6.1e-06 55.1 51 52.9
FvH4_5g17240 Fragaria vesca HOM05D000135 ORTHO05D000203 6.1e-06 55.1 33 75.8
Psat7g002360 Pisum sativum HOM05D015243 ORTHO05D000203 6.1e-06 55.1 42 59.5
RcHm_v2.0_Chr7g0178551 Rosa chinensis HOM05D000135 ORTHO05D000203 6.1e-06 55.1 39 64.1
EL10Ac1g00489 Beta vulgaris HOM05D000135 ORTHO05D000203 8.0e-06 54.7 64 45.3
CDE11G1117 Ceratophyllum demersum HOM05D000135 ORTHO05D000203 8.0e-06 54.7 49 53.1
ClCG06G014370 Citrullus lanatus HOM05D000135 ORTHO05D000203 8.0e-06 54.7 60 50.0
Sabra04G0059800 Salix brachista HOM05D003685 ORTHO05D003168 8.0e-06 54.7 40 62.5


User provided reference genes

Program Settings