Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0032700 Salix brachista HOM05D004254 ORTHO05D005184 4.6e-225 784.3 401 100.0
Sabra15G0031800 Salix brachista HOM05D004254 ORTHO05D005184 5.3e-181 637.9 381 90.3
Potri.015G037000 Populus trichocarpa HOM05D004254 ORTHO05D005184 8.5e-179 630.6 381 89.5
Manes.06G005200 Manihot esculenta HOM05D004254 ORTHO05D005184 8.2e-166 587.4 379 82.8
Atru.chr9.1674 Acer truncatum HOM05D004254 ORTHO05D005184 9.4e-162 573.9 401 77.6
Haze_18876 Corylus avellana HOM05D004254 ORTHO05D005184 3.6e-161 572.0 379 80.7
QL10p030432 Quercus lobata HOM05D004254 ORTHO05D005184 5.2e-160 568.2 378 80.2
CANSAT21G0981 Cannabis sativa HOM05D004254 ORTHO05D005184 6.7e-160 567.8 379 78.1
Prupe.5G234300 Prunus persica HOM05D004254 ORTHO05D005184 2.6e-159 565.8 379 79.4
Duzib084G0705 Durio zibethinus HOM05D004254 ORTHO05D005184 4.4e-159 565.1 381 78.5
GSVIVG01008461001 Vitis vinifera HOM05D004254 ORTHO05D005184 7.5e-159 564.3 379 79.4
Thecc.03G057600 Theobroma cacao HOM05D004254 ORTHO05D005184 2.8e-158 562.4 381 78.2
MD14G1237000 Malus domestica HOM05D004254 ORTHO05D005184 1.1e-157 560.5 379 79.2
CSS0013925 Camellia sinensis var. sinensis HOM05D004254 ORTHO05D005184 2.4e-157 559.3 384 77.9
arahy.Tifrunner.gnm1.ann1.QLLT1A Arachis hypogaea HOM05D004254 ORTHO05D005184 3.1e-157 558.9 381 77.4
Hma1.2p1_0163F.1_g073050 Hydrangea macrophylla HOM05D004254 ORTHO05D005184 3.1e-157 558.9 378 78.6
Actinidia12362 Actinidia chinensis HOM05D004254 ORTHO05D005184 1.2e-156 557.0 381 76.1
Nitab4.5_0001264g0010 Nicotiana tabacum HOM05D004254 ORTHO05D005184 1.2e-156 557.0 378 79.1
Sabra15G0059400 Salix brachista HOM05D004254 ORTHO05D005184 2.0e-156 556.2 437 73.5
CiPaw.15G144100 Carya illinoinensis HOM05D004254 ORTHO05D005184 2.7e-156 555.8 378 78.3
FvH4_5g17450 Fragaria vesca HOM05D004254 ORTHO05D005184 3.5e-156 555.4 379 78.1
Rhsim08G0126700 Rhododendron simsii HOM05D004254 ORTHO05D005184 4.5e-156 555.1 378 77.5
Ca_25341_v3 Cicer arietinum L. HOM05D004254 ORTHO05D005184 5.9e-156 554.7 381 77.4
Ca_25342_v3 Cicer arietinum L. HOM05D004254 ORTHO05D005184 5.9e-156 554.7 381 77.4
TWI81G0051 Tripterygium wilfordii HOM05D004254 ORTHO05D005184 5.9e-156 554.7 379 78.4
arahy.Tifrunner.gnm1.ann1.FFN37F Arachis hypogaea HOM05D004254 ORTHO05D005184 7.7e-156 554.3 381 77.2
COL.COLO4_06962 Corchorus olitorius HOM05D004254 ORTHO05D005184 1.0e-155 553.9 381 77.2
FAN04G2545 Fragaria x ananassa HOM05D004254 ORTHO05D005184 1.0e-155 553.9 379 78.1
TPR.G8645 Trifolium pratense HOM05D004254 ORTHO05D005184 1.7e-155 553.1 382 76.7
Aqoxy3G00045 Aquilegia oxysepala HOM05D004254 ORTHO05D005184 2.2e-155 552.7 379 76.8
Glyma.07G103000 Glycine max HOM05D004254 ORTHO05D005184 2.2e-155 552.7 381 76.6
PGR083G1460 Punica granatum HOM05D004254 ORTHO05D005184 2.2e-155 552.7 381 76.1
TAR629G2841 Trochodendron aralioides HOM05D004254 ORTHO05D005184 2.2e-155 552.7 378 77.8
Lj2g0021015 Lotus japonicus HOM05D004254 ORTHO05D005184 5.0e-155 551.6 381 76.4
Gorai.005G132300 Gossypium raimondii HOM05D004254 ORTHO05D005184 8.5e-155 550.8 381 76.4
Gohir.D02G121800 Gossypium hirsutum HOM05D004254 ORTHO05D005184 1.1e-154 550.4 381 76.1
Phvul.004G150100 Phaseolus vulgaris HOM05D004254 ORTHO05D005184 1.9e-154 549.7 381 75.9
Gohir.A03G092900 Gossypium hirsutum HOM05D004254 ORTHO05D005184 2.5e-154 549.3 381 76.1
Lj5A159T43 Lonicera japonica HOM05D004254 ORTHO05D005184 9.4e-154 547.4 379 77.6
VMungo0464G0766 Vigna mungo HOM05D004254 ORTHO05D005184 9.4e-154 547.4 381 75.6
Lalb_Chr14g0370611 Lupinus albus HOM05D004254 ORTHO05D005184 8.0e-153 544.3 381 75.6
RcHm_v2.0_Chr7g0178241 Rosa chinensis HOM05D004254 ORTHO05D005184 8.0e-153 544.3 379 77.3
FAN13G1575 Fragaria x ananassa HOM05D004254 ORTHO05D005184 8.8e-152 540.8 402 73.6
Sopen03g037600 Solanum pennellii HOM05D004254 ORTHO05D005184 1.2e-151 540.4 379 76.8
FAN18G0674 Fragaria x ananassa HOM05D004254 ORTHO05D005184 1.5e-151 540.0 402 73.4
Sabra15G0030400 Salix brachista HOM05D004254 ORTHO05D005184 3.4e-151 538.9 395 77.2
Sc10g0009220 Simmondsia chinensis HOM05D004254 ORTHO05D005184 4.4e-151 538.5 378 73.8
Medtr6g069660 Medicago truncatula HOM05D004254 ORTHO05D005184 9.8e-151 537.3 382 73.8
Solyc03g118640.3 Solanum lycopersicum HOM05D004254 ORTHO05D005184 1.3e-150 537.0 379 76.5
CAN.G843.50 Capsicum annuum HOM05D004254 ORTHO05D005184 2.8e-150 535.8 380 76.6
PSO017G0085 Papaver somniferum HOM05D004254 ORTHO05D005184 4.8e-150 535.0 378 74.1
HanXRQChr17g0559181 Helianthus annuus HOM05D004254 ORTHO05D005184 6.3e-150 534.6 378 74.1
Psat1g030920 Pisum sativum HOM05D004254 ORTHO05D005184 1.8e-149 533.1 382 73.3
DCAR_012097 Daucus carota HOM05D004254 ORTHO05D005184 1.2e-148 530.4 379 74.9
Migut.I00270 Erythranthe guttata HOM05D004254 ORTHO05D005184 1.2e-148 530.4 381 75.1
PSO478G1825 Papaver somniferum HOM05D004254 ORTHO05D005184 1.2e-148 530.4 378 73.5
vmacro17774 Vaccinium macrocarpon HOM05D004254 ORTHO05D005184 2.0e-148 529.6 420 68.8
Sed0023132 Sechium edule HOM05D004254 ORTHO05D005184 3.5e-148 528.9 381 71.4
MSTRG.11304 Avicennia marina HOM05D004254 ORTHO05D005184 4.5e-148 528.5 381 74.5
Eucgr.B00991 Eucalyptus grandis HOM05D004254 ORTHO05D005184 1.7e-147 526.6 379 75.2
MBI12_g17290_MAGBIO Magnolia biondii HOM05D004254 ORTHO05D005184 2.2e-147 526.2 376 74.7
Lsat_1_v5_gn_8_141761 Lactuca sativa HOM05D004254 ORTHO05D005184 2.9e-147 525.8 380 73.4
ECA233G1972 Erigeron canadensis HOM05D004254 ORTHO05D005184 3.8e-147 525.4 378 73.3
SGA_v2.0_scaffold28G11766 Striga asiatica HOM05D004254 ORTHO05D005184 3.8e-147 525.4 379 73.6
Cc04_g06160 Coffea canephora HOM05D004254 ORTHO05D005184 1.1e-146 523.9 378 74.6
CsaV3_1G004440 Cucumis sativus L. HOM05D004254 ORTHO05D005184 2.5e-146 522.7 378 72.0
MELO3C017366.2 Cucumis melo HOM05D004254 ORTHO05D005184 7.2e-146 521.2 378 72.0
ClCG06G014240 Citrullus lanatus HOM05D004254 ORTHO05D005184 1.2e-145 520.4 395 70.6
Peaxi162Scf00314g00334 Petunia axillaris HOM05D004254 ORTHO05D005184 1.4e-144 516.9 369 75.3
SalBow7G0492 Salvia bowleyana HOM05D004254 ORTHO05D005184 2.3e-144 516.2 381 72.2
Os06g0258900 Oryza sativa ssp. japonica HOM05D004254 ORTHO05D005184 1.2e-143 513.8 379 72.0
Zm00001eb280650 Zea mays HOM05D004254 ORTHO05D005184 9.8e-143 510.8 379 71.8
Thhalv10006567m.g Eutrema salsugineum HOM05D004254 ORTHO05D005184 1.7e-142 510.0 383 71.5
ATR1102G008 Amborella trichopoda HOM05D004254 ORTHO05D005184 6.3e-142 508.1 379 70.2
AT1G18270 Arabidopsis thaliana HOM05D004254 ORTHO05D005184 1.8e-141 506.5 383 71.5
Nitab4.5_0010223g0010 Nicotiana tabacum HOM05D004254 ORTHO05D005184 5.4e-141 505.0 377 73.5
SEGI_15506 Sequoiadendron giganteum HOM05D004254 ORTHO05D005184 7.0e-141 504.6 385 70.4
CARHR018830 Cardamine hirsuta HOM05D004254 ORTHO05D005184 1.6e-140 503.4 384 71.1
FAN08G2057 Fragaria x ananassa HOM05D004254 ORTHO05D005184 2.7e-140 502.7 340 77.9
AL1G30650 Arabidopsis lyrata HOM05D004254 ORTHO05D005184 7.7e-140 501.1 383 71.0
unitig_749.g14137 Utricularia gibba HOM05D004254 ORTHO05D005184 2.9e-139 499.2 385 71.2
Sp1g16240 Schrenkiella parvula HOM05D004254 ORTHO05D005184 5.0e-139 498.4 383 70.0
BcaC05g25721 Brassica carinata HOM05D004254 ORTHO05D005184 8.6e-139 497.7 383 70.2
BolC5t30352H Brassica oleracea HOM05D004254 ORTHO05D005184 8.6e-139 497.7 383 70.2
A06p14290 Brassica napus HOM05D004254 ORTHO05D005184 1.5e-138 496.9 383 70.0
C05p16550 Brassica napus HOM05D004254 ORTHO05D005184 1.9e-138 496.5 383 70.0
Carub.0001s1789 Capsella rubella HOM05D004254 ORTHO05D005184 1.9e-138 496.5 383 70.0
BraA06t24558Z Brassica rapa HOM05D004254 ORTHO05D005184 4.3e-138 495.4 383 69.7
BcaB07g31814 Brassica carinata HOM05D004254 ORTHO05D005184 2.3e-136 489.6 383 69.2
Sabra15G0062100 Salix brachista HOM05D004254 ORTHO05D005184 2.0e-135 486.5 294 87.8
HPP92_023491 Vanilla planifolia HOM05D004254 ORTHO05D005184 1.7e-134 483.4 381 67.2
Sabra15G0032200 Salix brachista HOM05D004254 ORTHO05D005184 2.4e-133 479.6 294 87.1
Sabra15G0058300 Salix brachista HOM05D004254 ORTHO05D005184 5.9e-132 474.9 312 83.0
Aa31LG7G2820 Aethionema arabicum HOM05D004254 ORTHO05D005184 7.8e-132 474.6 438 61.6
AUR62035874 Chenopodium quinoa HOM05D004254 ORTHO05D005184 7.8e-132 474.6 379 69.4
Pp3c23_11630 Physcomitrium patens HOM05D004254 ORTHO05D005184 1.9e-117 426.8 381 60.4
Sabra15G0036000 Salix brachista HOM05D004254 ORTHO05D005184 3.0e-115 419.5 226 96.9
Mapoly0094s0055 Marchantia polymorpha HOM05D004254 ORTHO05D005184 8.6e-115 417.9 383 58.5
Ciclev10009360m.g Citrus clementina HOM05D004254 ORTHO05D005184 1.2e-105 387.5 234 85.9
Nn4g24265 Nelumbo nucifera HOM05D004254 ORTHO05D005184 1.5e-103 380.6 234 82.9
Cpa.g.sc3.389 Carica papaya HOM05D004254 ORTHO05D005184 6.2e-97 358.6 245 78.0
SMO117G0106 Selaginella moellendorffii HOM05D004254 ORTHO05D005184 1.4e-96 357.5 348 56.3
Sabra15G0036200 Salix brachista HOM05D004254 ORTHO05D005184 1.6e-89 334.0 175 97.1
Sabra15G0030600 Salix brachista HOM05D004254 ORTHO05D005184 1.1e-88 331.3 226 81.0
Nn7g38444 Nelumbo nucifera HOM05D004254 ORTHO05D005184 3.3e-66 256.5 148 85.1
CBR_g29815 Chara braunii HOM05D004254 ORTHO05D005184 1.9e-53 214.2 198 57.1
CDE05G2038 Ceratophyllum demersum HOM05D004254 ORTHO05D005184 4.7e-52 209.5 173 64.7
Cpa.g.sc3.390 Carica papaya HOM05D004254 ORTHO05D005184 3.5e-47 193.4 125 81.6
Sabra15G0033600 Salix brachista HOM05D004254 ORTHO05D005184 6.5e-46 189.1 258 50.4
Hma1.2p1_0163F.1_g073040 Hydrangea macrophylla HOM05D004254 ORTHO05D005184 7.2e-45 185.7 146 69.2
Nn009s41423 Nelumbo nucifera HOM05D004254 ORTHO05D005184 9.4e-45 185.3 166 63.3
Pp3s34_503 Physcomitrium patens HOM05D004254 ORTHO05D005184 6.3e-41 172.6 280 39.3
Pp3s32_560 Physcomitrium patens HOM05D000198 ORTHO05D005184 2.9e-38 163.7 243 41.6
CBR_g29816 Chara braunii HOM05D000625 ORTHO05D000467 5.5e-37 159.5 195 43.6
Cfa024458 Carpinus fangiana HOM05D004254 ORTHO05D005184 2.7e-36 157.1 288 38.9
Sabra15G0062000 Salix brachista HOM05D004254 ORTHO05D005184 1.2e-34 151.8 87 95.4
Sabra15G0033700 Salix brachista HOM05D002538 ORTHO05D005184 1.7e-33 147.9 87 93.1
Medtr0937s0020 Medicago truncatula HOM05D002248 ORTHO05D028641 4.1e-24 116.7 288 31.2
Sabra15G0033300 Salix brachista HOM05D004254 ORTHO05D005184 5.0e-22 109.8 77 80.5
MCO15G159 Micromonas commoda HOM05D037556 ORTHO05D028641 4.4e-10 70.1 278 27.7
ATR1177G001 Amborella trichopoda HOM05D004254 ORTHO05D005184 1.4e-08 65.1 41 73.2
ATR0629G095 Amborella trichopoda HOM05D004254 ORTHO05D005184 7.8e-07 59.3 53 60.4
ATR0283G001 Amborella trichopoda HOM05D004254 ORTHO05D005184 1.0e-06 58.9 53 58.5


User provided reference genes

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