Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0032100 Salix brachista HOM05D004254 ORTHO05D005184 5.5e-130 467.6 232 100.0
Sabra15G0031800 Salix brachista HOM05D004254 ORTHO05D005184 8.0e-97 357.5 248 77.8
Potri.015G037000 Populus trichocarpa HOM05D004254 ORTHO05D005184 2.9e-91 339.0 235 77.4
Sabra15G0059400 Salix brachista HOM05D004254 ORTHO05D005184 1.5e-87 326.6 230 77.4
COL.COLO4_06962 Corchorus olitorius HOM05D004254 ORTHO05D005184 1.4e-85 320.1 235 71.9
Sabra15G0058300 Salix brachista HOM05D004254 ORTHO05D005184 1.6e-84 316.6 182 88.5
Thecc.03G057600 Theobroma cacao HOM05D004254 ORTHO05D005184 4.6e-84 315.1 235 71.1
Eucgr.B00991 Eucalyptus grandis HOM05D004254 ORTHO05D005184 7.8e-84 314.3 235 71.1
Gohir.D02G121800 Gossypium hirsutum HOM05D004254 ORTHO05D005184 3.0e-83 312.4 235 69.4
Gorai.005G132300 Gossypium raimondii HOM05D004254 ORTHO05D005184 3.0e-83 312.4 235 69.4
QL10p030449 Quercus lobata HOM05D004254 ORTHO05D005184 1.5e-82 310.1 240 70.4
Sabra15G0062200 Salix brachista HOM05D004254 ORTHO05D005184 1.5e-82 310.1 196 82.7
TWI81G0051 Tripterygium wilfordii HOM05D004254 ORTHO05D005184 4.3e-82 308.5 235 69.8
Gohir.A03G092900 Gossypium hirsutum HOM05D004254 ORTHO05D005184 2.1e-81 306.2 235 68.5
Manes.06G005200 Manihot esculenta HOM05D004254 ORTHO05D005184 2.8e-81 305.8 235 69.4
Duzib084G0705 Durio zibethinus HOM05D004254 ORTHO05D005184 6.2e-81 304.7 235 68.9
Sp1g16240 Schrenkiella parvula HOM05D004254 ORTHO05D005184 4.4e-79 298.5 236 67.4
CARHR018830 Cardamine hirsuta HOM05D004254 ORTHO05D005184 7.5e-79 297.7 235 68.1
Lalb_Chr14g0370611 Lupinus albus HOM05D004254 ORTHO05D005184 9.8e-79 297.4 235 67.2
AL1G30650 Arabidopsis lyrata HOM05D004254 ORTHO05D005184 1.3e-78 297.0 235 67.2
Thhalv10006567m.g Eutrema salsugineum HOM05D004254 ORTHO05D005184 2.9e-78 295.8 235 66.4
A06p14290 Brassica napus HOM05D004254 ORTHO05D005184 3.7e-78 295.4 236 66.9
Lj2g0021015 Lotus japonicus HOM05D004254 ORTHO05D005184 4.9e-78 295.0 235 67.7
Carub.0001s1789 Capsella rubella HOM05D004254 ORTHO05D005184 6.4e-78 294.7 235 66.4
BolC5t30352H Brassica oleracea HOM05D004254 ORTHO05D005184 8.3e-78 294.3 242 64.0
CANSAT21G0981 Cannabis sativa HOM05D004254 ORTHO05D005184 1.1e-77 293.9 235 66.8
AT1G18270 Arabidopsis thaliana HOM05D004254 ORTHO05D005184 1.4e-77 293.5 235 66.4
MD14G1237000 Malus domestica HOM05D004254 ORTHO05D005184 1.4e-77 293.5 235 67.2
Prupe.5G234300 Prunus persica HOM05D004254 ORTHO05D005184 1.4e-77 293.5 235 66.4
CiPaw.15G144100 Carya illinoinensis HOM05D004254 ORTHO05D005184 2.4e-77 292.7 235 67.2
Hma1.2p1_0163F.1_g073040 Hydrangea macrophylla HOM05D004254 ORTHO05D005184 4.1e-77 292.0 235 66.0
Ciclev10008504m.g Citrus clementina HOM05D004254 ORTHO05D005184 9.2e-77 290.8 235 66.0
FvH4_5g17450 Fragaria vesca HOM05D004254 ORTHO05D005184 1.2e-76 290.4 235 65.5
BraA06t24558Z Brassica rapa HOM05D004254 ORTHO05D005184 1.6e-76 290.0 242 63.6
RcHm_v2.0_Chr7g0178241 Rosa chinensis HOM05D004254 ORTHO05D005184 4.6e-76 288.5 235 65.1
TAR629G2841 Trochodendron aralioides HOM05D004254 ORTHO05D005184 4.6e-76 288.5 235 66.8
Cc04_g06150 Coffea canephora HOM05D004254 ORTHO05D005184 6.0e-76 288.1 243 62.6
Lj5A159T43 Lonicera japonica HOM05D004254 ORTHO05D005184 6.0e-76 288.1 237 65.8
Hma1.2p1_0163F.1_g073050 Hydrangea macrophylla HOM05D004254 ORTHO05D005184 1.0e-75 287.3 235 65.1
Actinidia12362 Actinidia chinensis HOM05D004254 ORTHO05D005184 3.0e-75 285.8 235 65.5
Nn009s41423 Nelumbo nucifera HOM05D004254 ORTHO05D005184 3.9e-75 285.4 235 66.0
CSS0013925 Camellia sinensis var. sinensis HOM05D004254 ORTHO05D005184 6.6e-75 284.6 235 65.5
Peaxi162Scf00314g00334 Petunia axillaris HOM05D004254 ORTHO05D005184 1.9e-74 283.1 235 64.7
GSVIVG01008461001 Vitis vinifera HOM05D004254 ORTHO05D005184 1.9e-74 283.1 235 65.5
FAN04G2545 Fragaria x ananassa HOM05D004254 ORTHO05D005184 2.5e-74 282.7 235 63.8
C05p16550 Brassica napus HOM05D004254 ORTHO05D005184 3.3e-74 282.3 241 63.9
Haze_18876 Corylus avellana HOM05D004254 ORTHO05D005184 9.5e-74 280.8 221 70.6
Sed0023132 Sechium edule HOM05D004254 ORTHO05D005184 9.5e-74 280.8 235 63.4
TPR.G8645 Trifolium pratense HOM05D004254 ORTHO05D005184 1.2e-73 280.4 235 63.4
Psat1g030920 Pisum sativum HOM05D004254 ORTHO05D005184 2.1e-73 279.6 235 63.0
PGR083G1460 Punica granatum HOM05D004254 ORTHO05D005184 2.1e-73 279.6 235 63.8
Solyc03g118640.3 Solanum lycopersicum HOM05D004254 ORTHO05D005184 2.8e-73 279.3 235 63.4
Sopen03g037600 Solanum pennellii HOM05D004254 ORTHO05D005184 2.8e-73 279.3 235 63.4
Nitab4.5_0001264g0010 Nicotiana tabacum HOM05D004254 ORTHO05D005184 4.7e-73 278.5 235 63.0
CAN.G843.50 Capsicum annuum HOM05D004254 ORTHO05D005184 6.2e-73 278.1 235 63.0
Glyma.07G103000 Glycine max HOM05D004254 ORTHO05D005184 1.1e-72 277.3 235 64.7
MELO3C017366.2 Cucumis melo HOM05D004254 ORTHO05D005184 1.4e-72 276.9 235 63.8
CsaV3_1G004440 Cucumis sativus L. HOM05D004254 ORTHO05D005184 1.4e-72 276.9 235 63.8
Aqoxy3G00045 Aquilegia oxysepala HOM05D004254 ORTHO05D005184 3.1e-72 275.8 235 64.3
MBI12_g17290_MAGBIO Magnolia biondii HOM05D004254 ORTHO05D005184 3.1e-72 275.8 231 65.8
Sc10g0009220 Simmondsia chinensis HOM05D004254 ORTHO05D005184 3.1e-72 275.8 235 62.1
PSO017G0085 Papaver somniferum HOM05D004254 ORTHO05D005184 2.6e-71 272.7 235 62.6
Migut.I00270 Erythranthe guttata HOM05D004254 ORTHO05D005184 3.4e-71 272.3 235 60.9
PSO478G1825 Papaver somniferum HOM05D004254 ORTHO05D005184 3.4e-71 272.3 235 62.6
Phvul.004G150100 Phaseolus vulgaris HOM05D004254 ORTHO05D005184 2.2e-70 269.6 235 61.3
DCAR_012097 Daucus carota HOM05D004254 ORTHO05D005184 8.3e-70 267.7 235 63.0
Oeu026271.2 Olea europaea HOM05D004254 ORTHO05D005184 8.3e-70 267.7 235 62.1
HanXRQChr17g0559181 Helianthus annuus HOM05D004254 ORTHO05D005184 1.1e-69 267.3 235 62.6
VMungo0464G0766 Vigna mungo HOM05D004254 ORTHO05D005184 1.4e-69 266.9 235 60.9
MSTRG.11304 Avicennia marina HOM05D004254 ORTHO05D005184 1.9e-69 266.5 235 62.1
Rhsim08G0126700 Rhododendron simsii HOM05D004254 ORTHO05D005184 7.1e-69 264.6 230 63.5
ClCG06G014240 Citrullus lanatus HOM05D004254 ORTHO05D005184 1.6e-68 263.5 257 57.6
ECA233G1972 Erigeron canadensis HOM05D004254 ORTHO05D005184 4.6e-68 261.9 235 61.3
Os06g0258900 Oryza sativa ssp. japonica HOM05D004254 ORTHO05D005184 4.6e-68 261.9 236 58.9
Lsat_1_v5_gn_8_141761 Lactuca sativa HOM05D004254 ORTHO05D005184 2.3e-67 259.6 235 60.9
arahy.Tifrunner.gnm1.ann1.QLLT1A Arachis hypogaea HOM05D004254 ORTHO05D005184 6.6e-67 258.1 221 62.4
Sabra15G0033300 Salix brachista HOM05D004254 ORTHO05D005184 6.6e-67 258.1 161 83.2
AUR62035874 Chenopodium quinoa HOM05D004254 ORTHO05D005184 1.9e-66 256.5 235 59.6
BcaC05g25721 Brassica carinata HOM05D004254 ORTHO05D005184 5.6e-66 255.0 235 60.0
Zm00001eb280650 Zea mays HOM05D004254 ORTHO05D005184 2.1e-65 253.1 236 56.8
unitig_749.g14137 Utricularia gibba HOM05D004254 ORTHO05D005184 1.4e-64 250.4 235 60.0
Aa31LG7G2820 Aethionema arabicum HOM05D004254 ORTHO05D005184 1.8e-64 250.0 198 66.7
Nitab4.5_0010223g0010 Nicotiana tabacum HOM05D004254 ORTHO05D005184 1.7e-62 243.4 297 49.2
SEGI_15506 Sequoiadendron giganteum HOM05D004254 ORTHO05D005184 1.6e-60 236.9 236 55.9
FAN18G0674 Fragaria x ananassa HOM05D004254 ORTHO05D005184 7.8e-60 234.6 170 69.4
arahy.Tifrunner.gnm1.ann1.FFN37F Arachis hypogaea HOM05D004254 ORTHO05D005184 1.3e-59 233.8 170 68.8
FAN13G1575 Fragaria x ananassa HOM05D004254 ORTHO05D005184 6.6e-59 231.5 170 68.8
HPP92_023491 Vanilla planifolia HOM05D004254 ORTHO05D005184 3.3e-58 229.2 237 53.2
Ca_25341_v3 Cicer arietinum L. HOM05D004254 ORTHO05D005184 7.3e-58 228.0 170 68.2
Ca_25342_v3 Cicer arietinum L. HOM05D004254 ORTHO05D005184 7.3e-58 228.0 170 68.2
Medtr6g069685 Medicago truncatula HOM05D004254 ORTHO05D005184 1.8e-56 223.4 170 66.5
Cpa.g.sc3.389 Carica papaya HOM05D004254 ORTHO05D005184 2.6e-55 219.5 227 58.6
Ah.13g074660 Amaranthus hybridus HOM05D004254 ORTHO05D005184 1.4e-53 213.8 221 54.3
SGA_v2.0_scaffold28G11766 Striga asiatica HOM05D004254 ORTHO05D005184 1.1e-50 204.1 183 60.1
Atru.chr9.1674 Acer truncatum HOM05D004254 ORTHO05D005184 3.1e-48 196.1 139 74.1
Mapoly0094s0055 Marchantia polymorpha HOM05D004254 ORTHO05D005184 3.1e-48 196.1 249 44.6
Pp3c23_11630 Physcomitrium patens HOM05D004254 ORTHO05D005184 9.0e-48 194.5 255 46.3
vmacro17774 Vaccinium macrocarpon HOM05D004254 ORTHO05D005184 1.9e-45 186.8 144 68.8
ATR1102G008 Amborella trichopoda HOM05D004254 ORTHO05D005184 1.6e-44 183.7 157 61.1
SalBow7G0492 Salvia bowleyana HOM05D004254 ORTHO05D005184 2.1e-44 183.3 207 52.7
SMO117G0106 Selaginella moellendorffii HOM05D004254 ORTHO05D005184 1.9e-42 176.8 252 43.7
Sabra15G0030700 Salix brachista HOM05D004254 ORTHO05D005184 2.1e-41 173.3 86 96.5
Sabra15G0032500 Salix brachista HOM05D004254 ORTHO05D000563 4.5e-23 112.5 54 100.0
Sabra15G0033400 Salix brachista HOM05D004254 ORTHO05D005184 8.5e-22 108.2 55 96.4
CBR_g29817 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-20 104.4 130 43.8
Sabra15G0030800 Salix brachista HOM05D004254 ORTHO05D005184 9.1e-16 88.2 55 81.8
ATR1102G040 Amborella trichopoda HOM05D004254 ORTHO05D005184 1.7e-14 84.0 54 70.4
arahy.Tifrunner.gnm1.ann1.PNMJ0W Arachis hypogaea HOM05D004254 ORTHO05D005184 5.5e-13 79.0 53 67.9
Medtr6g069660 Medicago truncatula HOM05D004254 ORTHO05D005184 2.8e-09 66.6 40 77.5
Ca_29429_v3 Cicer arietinum L. HOM05D004254 ORTHO05D005184 2.6e-07 60.1 51 52.9


User provided reference genes

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