Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 2.4e-170 603.6 312 100.0
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 3.1e-162 576.6 313 95.8
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 2.4e-154 550.4 312 89.1
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 1.5e-63 248.8 256 46.9
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 1.4e-61 242.3 255 46.7
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 1.7e-59 235.3 255 46.7
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 6.3e-54 216.9 317 41.0
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 6.3e-54 216.9 317 41.0
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 8.2e-54 216.5 304 42.4
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 3.1e-53 214.5 243 44.4
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 3.1e-53 214.5 254 45.3
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 3.1e-53 214.5 238 46.6
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 9.4e-50 203.0 283 41.3
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 3.9e-48 197.6 256 43.4
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 1.3e-46 192.6 238 44.1
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 6.3e-46 190.3 233 45.9
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 2.4e-45 188.3 216 45.4
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 4.7e-41 174.1 229 41.9
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 7.4e-39 166.8 260 37.3
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 9.7e-39 166.4 236 39.4
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 2.8e-38 164.9 250 35.2
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 2.8e-38 164.9 182 47.3
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 5.3e-37 160.6 223 37.7
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 7.0e-37 160.2 238 39.9
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 2.0e-36 158.7 223 37.2
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 2.6e-36 158.3 256 35.9
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 5.9e-36 157.1 232 38.4
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 3.8e-35 154.5 258 38.0
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 5.0e-35 154.1 198 40.9
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 9.4e-34 149.8 210 39.5
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 3.6e-33 147.9 242 36.4
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 6.1e-33 147.1 203 39.4
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 6.1e-33 147.1 211 39.3
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 6.1e-33 147.1 211 38.4
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.0e-32 146.4 212 39.2
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 3.0e-32 144.8 203 40.4
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 5.2e-32 144.1 233 38.2
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 5.2e-32 144.1 177 43.5
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 5.2e-32 144.1 211 37.4
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 5.2e-32 144.1 225 36.4
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 3.3e-31 141.4 246 34.6
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 4.8e-30 137.5 160 44.4
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 1.9e-26 125.6 210 35.7
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 3.2e-26 124.8 179 39.7
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 1.6e-25 122.5 193 34.7
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 2.0e-23 115.5 178 36.5
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 7.2e-18 97.1 206 31.6
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 1.1e-10 73.2 101 37.6
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 4.0e-08 64.7 201 21.9
Medtr6g005000 Medicago truncatula HOM05D007358 ORTHO05D009117 1.5e-07 62.8 210 27.1
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 3.4e-07 61.6 176 25.0
TPR.G14066 Trifolium pratense HOM05D007358 ORTHO05D009117 4.4e-07 61.2 222 26.1
Manes.17G021400 Manihot esculenta HOM05D007358 ORTHO05D009117 5.7e-07 60.8 146 26.0
CARHR109130 Cardamine hirsuta HOM05D000891 ORTHO05D000761 7.5e-07 60.5 193 26.9
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 1.3e-06 59.7 181 26.5
Gohir.D11G070700 Gossypium hirsutum HOM05D007358 ORTHO05D009117 2.8e-06 58.5 150 28.0
Gorai.007G075800 Gossypium raimondii HOM05D007358 ORTHO05D009117 2.8e-06 58.5 150 28.0
Potri.015G105400 Populus trichocarpa HOM05D005764 ORTHO05D006600 2.8e-06 58.5 264 23.5
Gohir.A11G066500 Gossypium hirsutum HOM05D007358 ORTHO05D009117 3.7e-06 58.2 147 27.2
Thecc.04G015800 Theobroma cacao HOM05D007358 ORTHO05D009117 4.9e-06 57.8 158 26.6
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 6.3e-06 57.4 174 27.0


User provided reference genes

Program Settings