Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 8.3e-45 183.3 93 100.0
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 9.8e-38 159.8 93 87.1
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 2.3e-23 112.1 94 67.0
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 1.2e-14 83.2 96 55.2
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 4.4e-14 81.3 91 54.9
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 7.6e-14 80.5 96 52.1
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 2.2e-13 79.0 93 52.7
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 2.9e-13 78.6 93 49.5
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 2.9e-13 78.6 96 50.0
Gorai.006G203600 Gossypium raimondii HOM05D018669 ORTHO05D011237 3.8e-13 78.2 100 50.0
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 6.4e-13 77.4 93 49.5
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.1e-12 76.6 100 46.0
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 1.1e-12 76.6 92 48.9
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.4e-12 76.3 92 50.0
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 1.9e-12 75.9 98 51.0
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 1.9e-12 75.9 97 50.5
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 4.2e-12 74.7 94 51.1
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 5.4e-12 74.3 93 44.1
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 5.4e-12 74.3 107 47.7
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 7.1e-12 73.9 94 47.9
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 9.3e-12 73.6 92 48.9
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 2.1e-11 72.4 93 48.4
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 2.1e-11 72.4 96 46.9
Gohir.D09G181600 Gossypium hirsutum HOM05D018669 ORTHO05D011237 2.7e-11 72.0 100 48.0
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.5e-11 71.6 101 44.6
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 3.5e-11 71.6 101 45.5
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 4.6e-11 71.2 98 46.9
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 4.6e-11 71.2 95 49.5
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 6.0e-11 70.9 93 47.3
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 1.3e-10 69.7 93 44.1
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 6.6e-10 67.4 96 46.9
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 8.7e-10 67.0 94 45.7
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 1.5e-09 66.2 97 41.2
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 2.5e-09 65.5 113 40.7
Nitab4.5_0000319g0160 Nicotiana tabacum HOM05D008837 ORTHO05D006961 2.5e-09 65.5 98 45.9
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 3.3e-09 65.1 92 42.4
DCAR_020369 Daucus carota HOM05D008837 ORTHO05D011237 3.3e-09 65.1 92 43.5
Nitab4.5_0014067g0010 Nicotiana tabacum HOM05D008837 ORTHO05D006961 4.3e-09 64.7 94 42.6
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 4.3e-09 64.7 105 42.9
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 4.3e-09 64.7 105 42.9
DCAR_008981 Daucus carota HOM05D008837 ORTHO05D011237 5.6e-09 64.3 96 46.9
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 5.6e-09 64.3 101 43.6
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 5.6e-09 64.3 91 45.1
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 5.6e-09 64.3 92 42.4
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 9.6e-09 63.5 103 41.7
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 9.6e-09 63.5 103 41.7
Nitab4.5_0000319g0090 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.3e-08 63.2 106 45.3
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 1.3e-08 63.2 105 41.9
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 1.3e-08 63.2 93 41.9
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 1.6e-08 62.8 90 40.0
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 1.6e-08 62.8 105 41.0
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 1.6e-08 62.8 95 41.1
Sopen03g022070 Solanum pennellii HOM05D008837 ORTHO05D006961 2.1e-08 62.4 104 39.4
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 2.8e-08 62.0 96 41.7
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 2.8e-08 62.0 96 41.7
Cfa016165 Carpinus fangiana HOM05D001784 ORTHO05D001699 4.8e-08 61.2 86 40.7
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 4.8e-08 61.2 96 42.7
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 8.1e-08 60.5 92 39.1
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 8.1e-08 60.5 100 41.0
Nn1g00438 Nelumbo nucifera HOM05D008613 ORTHO05D006961 1.1e-07 60.1 92 41.3
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 1.8e-07 59.3 91 42.9
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 1.8e-07 59.3 92 40.2
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.4e-07 58.9 91 42.9
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.4e-07 58.9 91 42.9
Nn3g18877 Nelumbo nucifera HOM05D031625 ORTHO05D006961 2.4e-07 58.9 98 42.9
Nn3g18879 Nelumbo nucifera HOM05D031625 ORTHO05D006961 2.4e-07 58.9 98 42.9
Ah.13g070730 Amaranthus hybridus HOM05D008613 ORTHO05D011237 3.1e-07 58.5 90 40.0
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 3.1e-07 58.5 94 42.6
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 3.1e-07 58.5 94 42.6
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 3.1e-07 58.5 92 40.2
vmacro06438 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 3.1e-07 58.5 98 41.8
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 4.0e-07 58.2 92 40.2
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 4.0e-07 58.2 96 42.7
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 4.0e-07 58.2 92 39.1
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 5.3e-07 57.8 95 42.1
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 6.9e-07 57.4 89 42.7
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 9.0e-07 57.0 100 41.0
CANSAT21G0289 Cannabis sativa HOM05D018669 ORTHO05D011237 1.2e-06 56.6 93 43.0
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 1.5e-06 56.2 93 43.0
Sopen03g022090 Solanum pennellii HOM05D008837 ORTHO05D006961 1.5e-06 56.2 91 41.8
Aa31LG9G11460 Aethionema arabicum HOM05D008703 ORTHO05D006961 2.0e-06 55.8 90 35.6
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 2.0e-06 55.8 89 43.8
Cpa.g.sc3.157 Carica papaya HOM05D008837 ORTHO05D011237 2.0e-06 55.8 92 39.1
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 2.0e-06 55.8 92 40.2
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 2.0e-06 55.8 92 43.5
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.0e-06 55.8 92 38.0
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 2.0e-06 55.8 92 40.2
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.6e-06 55.5 92 39.1
Lsat_1_v5_gn_8_4480 Lactuca sativa HOM05D011561 ORTHO05D011237 3.4e-06 55.1 86 44.2
Peaxi162Scf00300g00088 Petunia axillaris HOM05D008837 ORTHO05D006961 4.4e-06 54.7 101 40.6
AT5G54165 Arabidopsis thaliana HOM05D011561 ORTHO05D011237 7.6e-06 53.9 93 38.7
EL10Ac3g05184 Beta vulgaris HOM05D008613 ORTHO05D006961 7.6e-06 53.9 92 38.0
COL.COLO4_10830 Corchorus olitorius HOM05D008613 ORTHO05D006961 7.6e-06 53.9 89 39.3
Manes.01G055000 Manihot esculenta HOM05D008613 ORTHO05D006961 7.6e-06 53.9 93 40.9
Solyc03g082370.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 9.9e-06 53.5 90 41.1


User provided reference genes

Program Settings