Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 3.5e-58 228.0 112 100.0
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 1.8e-54 215.7 106 99.1
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 5.7e-48 194.1 106 87.7
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 9.7e-48 193.4 106 87.7
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 1.6e-47 192.6 106 88.7
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 3.7e-47 191.4 106 87.7
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 4.8e-47 191.0 106 86.8
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 4.8e-47 191.0 107 86.9
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 8.2e-47 190.3 106 85.8
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 1.4e-46 189.5 106 86.8
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.8e-46 189.1 106 85.8
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.8e-46 189.1 106 85.8
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.8e-46 189.1 106 85.8
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 1.8e-46 189.1 106 86.8
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 2.4e-46 188.7 106 86.8
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 2.4e-46 188.7 106 86.8
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 2.4e-46 188.7 106 84.9
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 4.1e-46 188.0 106 84.9
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 4.1e-46 188.0 106 84.9
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 4.1e-46 188.0 106 84.9
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 5.3e-46 187.6 106 86.8
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 1.2e-45 186.4 107 84.1
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 2.0e-45 185.7 106 84.9
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 2.0e-45 185.7 106 84.9
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 2.6e-45 185.3 106 84.0
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 2.6e-45 185.3 107 84.1
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 4.5e-45 184.5 106 82.1
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 7.6e-45 183.7 106 84.0
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 1.0e-44 183.3 106 82.1
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 1.0e-44 183.3 106 83.0
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 2.2e-44 182.2 106 83.0
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 6.5e-44 180.6 106 79.2
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 6.5e-44 180.6 109 78.9
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 6.5e-44 180.6 106 81.1
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 6.5e-44 180.6 106 84.0
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 6.5e-44 180.6 106 82.1
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 8.5e-44 180.3 106 84.0
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 8.5e-44 180.3 106 83.0
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 8.5e-44 180.3 107 80.4
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 1.1e-43 179.9 105 82.9
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 2.5e-43 178.7 105 81.9
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 2.5e-43 178.7 105 81.9
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 3.2e-43 178.3 107 82.2
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 4.2e-43 177.9 106 78.3
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 4.2e-43 177.9 106 78.3
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 5.5e-43 177.6 107 80.4
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 5.5e-43 177.6 104 81.7
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 5.5e-43 177.6 104 81.7
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 7.2e-43 177.2 106 79.2
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 7.2e-43 177.2 107 80.4
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 7.2e-43 177.2 107 78.5
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 7.2e-43 177.2 106 78.3
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 7.2e-43 177.2 106 81.1
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 9.3e-43 176.8 107 78.5
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 9.3e-43 176.8 106 80.2
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 1.6e-42 176.0 107 79.4
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 1.6e-42 176.0 106 78.3
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 2.1e-42 175.6 107 79.4
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 2.7e-42 175.3 106 80.2
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 3.6e-42 174.9 107 78.5
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 4.6e-42 174.5 106 79.2
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 4.6e-42 174.5 106 77.4
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 6.1e-42 174.1 106 79.2
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 6.1e-42 174.1 106 79.2
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 7.9e-42 173.7 106 77.4
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 7.9e-42 173.7 106 78.3
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 7.9e-42 173.7 106 79.2
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 7.9e-42 173.7 105 79.0
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 1.8e-41 172.6 106 76.4
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 1.8e-41 172.6 106 80.2
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 2.3e-41 172.2 107 77.6
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 3.0e-41 171.8 107 81.3
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 3.0e-41 171.8 105 77.1
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 3.0e-41 171.8 119 73.1
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 3.9e-41 171.4 106 77.4
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 3.9e-41 171.4 106 77.4
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 3.9e-41 171.4 106 81.1
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 5.7e-40 167.5 106 76.4
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 5.7e-40 167.5 105 78.1
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 9.7e-40 166.8 108 75.9
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 9.7e-40 166.8 108 75.9
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 3.7e-39 164.9 106 75.5
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 1.1e-38 163.3 109 72.5
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 3.1e-38 161.8 107 71.0
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 3.1e-38 161.8 113 69.0
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 4.1e-38 161.4 132 64.4
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 5.3e-38 161.0 106 69.8
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 5.9e-37 157.5 113 68.1
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 7.7e-37 157.1 106 70.8
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 6.5e-36 154.1 107 70.1
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 1.4e-35 152.9 106 69.8
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 2.5e-35 152.1 106 69.8
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.6e-34 149.4 106 70.8
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.6e-34 149.4 106 70.8
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 4.7e-34 147.9 106 67.0
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 7.9e-34 147.1 110 61.8
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 1.0e-33 146.7 107 63.6
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 1.0e-33 146.7 107 63.6
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 3.0e-33 145.2 107 65.4
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 8.8e-33 143.7 100 65.0
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 1.1e-32 143.3 107 67.3
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 2.0e-32 142.5 112 58.9
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 4.8e-31 137.9 82 84.1
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 2.9e-28 128.6 107 50.5
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 2.0e-24 115.9 106 50.9
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 3.3e-24 115.2 107 57.0
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 6.3e-23 110.9 58 86.2
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 5.3e-22 107.8 107 52.3
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 5.9e-21 104.4 59 78.0
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 5.9e-21 104.4 59 78.0
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.9e-20 102.1 59 72.9
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.9e-20 102.1 59 72.9
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 6.1e-18 94.4 65 67.7
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 6.1e-18 94.4 65 67.7
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 1.5e-16 89.7 55 72.7
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 1.6e-10 69.7 73 53.4
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 3.6e-10 68.6 49 67.3
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 3.6e-10 68.6 51 54.9
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 2.0e-08 62.8 72 50.0
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.8e-06 56.2 40 67.5


User provided reference genes

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