Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 0.0e+00 1589.7 804 100.0
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 2.5e-291 1005.4 574 87.6
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 2.1e-197 693.3 585 62.9
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 4.4e-195 685.6 577 62.9
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.3e-194 684.1 579 61.7
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 2.5e-190 669.8 578 60.7
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 2.2e-186 656.8 580 60.3
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 4.3e-182 642.5 505 65.9
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 9.6e-182 641.3 563 59.7
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 2.8e-181 639.8 595 57.6
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 6.9e-180 635.2 563 59.3
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.0e-179 633.6 586 58.7
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 2.0e-179 633.6 586 58.5
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 5.5e-177 625.5 579 57.7
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.0e-175 621.3 586 57.8
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 3.7e-173 612.8 549 59.6
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 7.6e-171 605.1 580 56.9
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 1.1e-166 591.3 581 55.1
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 1.5e-166 590.9 669 52.2
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 1.3e-165 587.8 596 52.9
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 1.3e-165 587.8 561 56.7
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 1.3e-165 587.8 577 54.6
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 1.7e-162 577.4 562 56.6
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 3.2e-161 573.2 555 54.6
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 4.2e-161 572.8 524 57.6
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.2e-160 571.2 565 54.7
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 4.3e-158 562.8 637 51.2
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 4.3e-158 562.8 577 53.9
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 1.3e-157 561.2 580 52.8
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 1.3e-157 561.2 582 54.5
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 2.4e-156 557.0 582 52.7
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 4.1e-156 556.2 577 52.7
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 5.3e-156 555.8 562 52.7
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 1.5e-155 554.3 582 52.6
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 1.5e-155 554.3 582 52.6
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 1.3e-154 551.2 572 53.5
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 8.5e-154 548.5 546 54.2
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.2e-152 544.7 583 52.3
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.2e-152 544.7 584 51.9
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 2.1e-152 543.9 546 53.7
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 6.1e-152 542.3 584 53.3
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 3.9e-151 539.7 583 51.6
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 3.9e-151 539.7 597 49.1
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 2.0e-150 537.3 585 52.8
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 4.4e-150 536.2 581 51.1
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 5.7e-150 535.8 586 51.9
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 3.7e-149 533.1 583 52.1
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 3.7e-149 533.1 579 52.3
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 6.3e-149 532.3 593 50.4
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 1.8e-148 530.8 583 52.0
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 5.5e-145 519.2 582 50.9
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 4.0e-143 513.1 585 48.4
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 5.7e-142 509.2 592 48.5
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 9.7e-142 508.4 580 49.7
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 2.0e-139 500.7 600 47.3
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 4.5e-139 499.6 582 48.6
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 4.5e-139 499.6 582 48.6
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 6.5e-138 495.7 593 49.4
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 5.5e-137 492.7 605 47.1
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 6.1e-136 489.2 572 47.9
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 8.8e-135 485.3 587 48.0
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 2.0e-134 484.2 606 46.5
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 2.6e-134 483.8 593 48.4
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 7.5e-134 482.3 593 47.9
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 3.1e-132 476.9 666 43.5
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 3.5e-131 473.4 510 52.4
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 5.9e-131 472.6 588 47.1
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 2.2e-130 470.7 592 47.6
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 5.5e-129 466.1 589 47.4
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 2.7e-128 463.8 607 46.3
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 2.3e-127 460.7 582 45.2
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 5.2e-127 459.5 513 52.0
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 1.5e-126 458.0 559 44.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 8.3e-125 452.2 570 45.3
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 9.1e-124 448.7 626 43.1
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.7e-117 427.9 430 54.7
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 2.3e-114 417.5 424 52.6
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 4.0e-111 406.8 606 42.7
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 1.9e-108 397.9 574 41.8
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.4e-100 371.7 438 47.3
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 2.1e-99 367.9 443 45.8
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 5.1e-90 336.7 310 57.1
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 1.5e-89 335.1 395 47.3
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 3.3e-89 334.0 344 53.5
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 4.7e-88 330.1 303 54.8
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 5.2e-87 326.6 342 52.9
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 2.4e-79 301.2 303 54.5
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 3.6e-72 277.3 240 60.4
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 5.1e-66 256.9 302 48.7
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 8.4e-61 239.6 250 53.6
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 2.5e-52 211.5 250 46.8
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 2.7e-51 208.0 362 37.6
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 1.4e-47 195.7 595 28.9
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 5.0e-45 187.2 289 41.2
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 1.4e-44 185.7 566 29.3
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 3.6e-43 181.0 180 53.9
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 6.3e-40 170.2 223 42.6
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 1.0e-37 162.9 303 37.3
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 3.5e-30 137.9 149 50.3
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 5.9e-30 137.1 138 54.3
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 8.5e-29 133.3 150 49.3
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 1.0e-26 126.3 152 45.4
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 2.3e-26 125.2 150 46.0
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 5.7e-25 120.6 101 56.4
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 9.7e-25 119.8 123 51.2
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 6.3e-24 117.1 137 47.4
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 1.4e-23 115.9 389 28.0
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 1.7e-21 109.0 200 37.0
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 3.8e-21 107.8 394 27.9
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 2.5e-20 105.1 74 68.9
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 9.4e-20 103.2 339 26.8
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 6.8e-18 97.1 122 43.4
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 1.2e-17 96.3 593 24.3
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 5.7e-17 94.0 111 46.8
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 2.7e-14 85.1 93 49.5
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 1.5e-12 79.3 95 44.2
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 7.2e-12 77.0 104 48.1
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 3.0e-10 71.6 71 52.1
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.4e-09 67.8 74 50.0
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 5.7e-09 67.4 87 40.2
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 1.4e-07 62.8 82 34.1
RcHm_v2.0_Chr3g0485191 Rosa chinensis HOM05D006061 ORTHO05D007450 3.5e-06 58.2 55 50.9


User provided reference genes

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