Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 0.0e+00 1797.7 968 100.0
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 0.0e+00 1421.8 1034 74.8
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.1e-128 465.3 974 37.6
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.2e-124 451.1 975 35.8
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 6.1e-114 416.4 1033 33.7
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 2.7e-106 391.0 981 33.2
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 7.4e-104 382.9 988 34.1
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 1.7e-100 371.7 1016 32.1
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.8e-94 351.7 1007 32.0
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 4.2e-91 340.5 1006 31.4
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 8.8e-89 332.8 1017 30.5
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.0e-84 317.0 980 30.5
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 1.1e-83 315.8 995 31.2
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 3.6e-82 310.8 981 30.9
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.0e-81 309.3 1023 30.7
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-80 305.8 984 30.5
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 3.4e-80 304.3 1128 29.1
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.5e-72 278.9 966 28.1
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.0e-72 278.5 1008 29.9
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.6e-72 278.1 1007 29.7
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 7.5e-72 276.6 1009 27.8
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.7e-69 268.1 1036 27.4
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 4.3e-67 260.8 1002 27.6
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 2.3e-65 255.0 997 29.2
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 8.9e-65 253.1 996 27.2
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 4.4e-64 250.8 987 28.1
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.4e-62 245.7 983 27.8
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.8e-62 245.4 985 28.0
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 2.4e-62 245.0 982 27.8
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.7e-61 241.5 986 27.9
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 1.7e-60 238.8 938 29.5
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.4e-54 218.4 319 45.1
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.6e-53 215.7 284 45.1
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 6.0e-53 213.8 527 34.3
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 2.3e-52 211.8 555 33.0
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.2e-50 206.1 528 33.5
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 8.1e-50 203.4 579 30.7
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.1e-49 203.0 530 33.0
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 1.2e-48 199.5 997 26.2
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 1.5e-48 199.1 548 30.5
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 2.0e-48 198.7 973 26.1
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 2.6e-48 198.4 1052 25.8
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 4.4e-48 197.6 997 26.4
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 5.8e-48 197.2 203 51.7
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 7.5e-48 196.8 970 26.1
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 2.9e-47 194.9 371 38.8
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 1.9e-46 192.2 1095 26.8
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 4.1e-46 191.0 515 32.2
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 5.4e-46 190.7 233 46.8
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 5.4e-46 190.7 488 32.6
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 7.1e-46 190.3 525 32.2
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 6.0e-45 187.2 965 25.4
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.7e-44 185.7 455 32.1
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 5.1e-44 184.1 404 35.9
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 6.6e-44 183.7 532 32.1
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 8.6e-44 183.3 997 26.5
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.9e-43 182.2 216 50.5
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.3e-43 181.0 191 50.8
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 7.3e-43 180.3 307 42.3
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 9.5e-43 179.9 967 25.1
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.6e-42 179.1 455 31.9
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 3.6e-42 177.9 590 28.5
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 4.7e-42 177.6 288 38.9
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 6.2e-42 177.2 299 39.8
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.4e-41 175.3 531 29.8
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 2.4e-41 175.3 1001 24.3
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 5.2e-41 174.1 439 32.3
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 6.8e-41 173.7 984 25.4
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.5e-40 172.6 326 36.8
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.6e-40 171.8 285 40.7
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 1.3e-39 169.5 994 24.2
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.7e-39 169.1 555 29.4
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.1e-38 166.4 966 25.3
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.4e-38 166.0 116 72.4
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 1.9e-38 165.6 346 34.4
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 1.9e-38 165.6 346 34.4
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 2.4e-38 165.2 266 41.0
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 3.2e-38 164.9 263 41.1
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 7.1e-38 163.7 274 37.2
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 2.7e-37 161.8 431 33.4
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 3.5e-37 161.4 274 37.2
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 3.5e-37 161.4 278 39.6
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 7.8e-37 160.2 358 33.5
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.0e-36 159.8 338 33.7
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.7e-36 159.1 348 33.6
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.7e-36 159.1 377 32.4
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 2.3e-36 158.7 346 33.2
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 2.3e-36 158.7 346 33.2
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 5.1e-36 157.5 250 38.8
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 6.6e-36 157.1 299 37.8
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 8.7e-36 156.8 465 29.9
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.9e-35 155.6 254 38.2
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 7.3e-35 153.7 986 24.4
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 2.1e-34 152.1 408 35.3
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 6.2e-34 150.6 991 23.5
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 5.2e-33 147.5 1013 23.7
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 9.9e-32 143.3 259 39.0
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.9e-31 141.7 1045 23.3
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 2.9e-31 141.7 258 38.4
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 6.4e-31 140.6 440 30.2
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.4e-30 139.4 1018 24.8
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.7e-28 132.5 145 46.9
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.1e-27 129.8 250 38.4
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 1.9e-27 129.0 454 29.1
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 8.1e-26 123.6 256 34.4
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.4e-25 122.9 1005 24.3
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.8e-25 122.5 257 35.4
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.4e-25 122.1 1017 21.3
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 3.1e-25 121.7 91 70.3
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 9.0e-25 120.2 190 37.9
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 2.0e-24 119.0 436 28.9
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.6e-24 118.6 279 29.4
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 3.4e-24 118.2 123 51.2
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 9.3e-22 110.2 291 29.9
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 9.3e-22 110.2 435 29.7
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.1e-19 103.2 163 37.4
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 8.1e-18 97.1 240 35.0
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 5.5e-14 84.3 243 29.2
Gohir.A03G078400 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-13 83.2 316 26.3
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.3e-11 75.1 155 36.1
CDE02G0146 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 2.8e-10 72.0 169 32.0
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.1e-09 70.1 159 31.4
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.8e-09 69.3 77 48.1
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 3.1e-09 68.6 178 32.0
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 4.0e-09 68.2 250 30.8
CBR_g25863 Chara braunii HOM05D005945 ORTHO05D006749 5.3e-09 67.8 161 29.2
THA.LOC104803300 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 4.9e-07 61.2 281 25.6
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.1e-06 60.1 127 31.5


User provided reference genes

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