Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0136400 Salix brachista HOM05D062860 ORTHO05D349388 1.5e-33 145.6 75 100.0
Sabra14G0138400 Salix brachista HOM05D062860 ORTHO05D349947 1.5e-33 145.6 75 100.0
Potri.014G178100 Populus trichocarpa HOM05D000131 ORTHO05D000086 2.6e-28 128.3 74 90.5
Potri.002G238800 Populus trichocarpa HOM05D000131 ORTHO05D000086 6.5e-24 113.6 74 79.7
Manes.12G042700 Manihot esculenta HOM05D000131 ORTHO05D000086 3.8e-16 87.8 75 65.3
Manes.13G043900 Manihot esculenta HOM05D000131 ORTHO05D000086 4.4e-12 74.3 74 56.8
Cpa.g.sc8.183 Carica papaya HOM05D000131 ORTHO05D000086 5.7e-12 73.9 74 56.8
CiPaw.03G152000 Carya illinoinensis HOM05D000131 ORTHO05D000086 1.3e-11 72.8 76 57.9
Haze_24768 Corylus avellana HOM05D000131 ORTHO05D000086 3.7e-11 71.2 75 58.7
QL09p044473 Quercus lobata HOM05D000131 ORTHO05D000086 3.1e-10 68.2 76 55.3
TWI59G0601 Tripterygium wilfordii HOM05D000131 ORTHO05D000086 4.1e-10 67.8 73 54.8
TAR362G0384 Trochodendron aralioides HOM05D000131 ORTHO05D000086 4.1e-10 67.8 76 53.9
CiPaw.04G107400 Carya illinoinensis HOM05D000131 ORTHO05D000086 7.0e-10 67.0 79 54.4
Atru.chr5.1995 Acer truncatum HOM05D000131 ORTHO05D000086 9.1e-10 66.6 74 50.0
Cfa002540 Carpinus fangiana HOM05D000131 ORTHO05D000086 9.1e-10 66.6 75 56.0
CANSAT01G2900 Cannabis sativa HOM05D000131 ORTHO05D000086 2.0e-09 65.5 84 51.2
Prupe.8G206800 Prunus persica HOM05D000131 ORTHO05D000086 2.7e-09 65.1 73 52.1
TAR633G1159 Trochodendron aralioides HOM05D000131 ORTHO05D000086 3.5e-09 64.7 76 56.6
Gorai.007G152500 Gossypium raimondii HOM05D000131 ORTHO05D000086 7.7e-09 63.5 68 52.9
Dinv19225 Davidia involucrata HOM05D000131 ORTHO05D000086 1.0e-08 63.2 77 53.2
Thecc.01G229600 Theobroma cacao HOM05D000131 ORTHO05D000086 1.3e-08 62.8 75 50.7
Gohir.A11G135800 Gossypium hirsutum HOM05D000131 ORTHO05D000086 1.7e-08 62.4 68 51.5
Duzib133G1509 Durio zibethinus HOM05D000131 ORTHO05D000086 2.9e-08 61.6 75 48.0
Ciclev10019202m.g Citrus clementina HOM05D000131 ORTHO05D000086 3.8e-08 61.2 70 50.0
Duzib211G0664 Durio zibethinus HOM05D000131 ORTHO05D000086 3.8e-08 61.2 75 50.7
Gohir.D11G142100 Gossypium hirsutum HOM05D000131 ORTHO05D000086 5.0e-08 60.8 68 51.5
Duzib138G0444 Durio zibethinus HOM05D000131 ORTHO05D000086 6.5e-08 60.5 75 46.7
Hma1.2p1_1858F.1_g305600 Hydrangea macrophylla HOM05D000131 ORTHO05D000086 8.5e-08 60.1 78 50.0
FvH4_2g19540 Fragaria vesca HOM05D000131 ORTHO05D000086 1.1e-07 59.7 71 46.5
FAN24G1014 Fragaria x ananassa HOM05D000131 ORTHO05D000086 1.9e-07 58.9 70 47.1
GSVIVG01028548001 Vitis vinifera HOM05D000131 ORTHO05D000086 1.9e-07 58.9 80 55.0
Gohir.A07G155100 Gossypium hirsutum HOM05D000131 ORTHO05D000086 5.5e-07 57.4 76 48.7
Gohir.D07G161400 Gossypium hirsutum HOM05D000131 ORTHO05D000086 1.2e-06 56.2 77 48.1
Gorai.001G184600 Gossypium raimondii HOM05D000131 ORTHO05D000086 2.7e-06 55.1 77 46.8
RcHm_v2.0_Chr6g0285301 Rosa chinensis HOM05D000131 ORTHO05D000086 3.6e-06 54.7 72 47.2
Hma1.2p1_2697F.1_g327040 Hydrangea macrophylla HOM05D000131 ORTHO05D000086 4.7e-06 54.3 78 46.2
MD10G1169100 Malus domestica HOM05D000131 ORTHO05D000086 4.7e-06 54.3 76 46.1
TWI14G0147 Tripterygium wilfordii HOM05D000131 ORTHO05D000086 4.7e-06 54.3 73 46.6
TAR636G3395 Trochodendron aralioides HOM05D000131 ORTHO05D000086 4.7e-06 54.3 77 49.4
MD05G1179500 Malus domestica HOM05D000131 ORTHO05D000086 6.1e-06 53.9 76 44.7
Oeu022331.1 Olea europaea HOM05D000131 ORTHO05D000086 6.1e-06 53.9 78 46.2
Sp3g22440 Schrenkiella parvula HOM05D000131 ORTHO05D000086 8.0e-06 53.5 67 52.2


User provided reference genes

Program Settings