Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 3.0e-136 488.4 233 100.0
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 7.3e-74 281.2 222 59.9
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 2.1e-73 279.6 221 62.0
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 6.2e-73 278.1 226 61.5
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.2e-71 273.9 222 60.8
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 2.6e-71 272.7 229 60.3
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 4.4e-71 271.9 226 59.3
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 5.8e-71 271.6 224 60.7
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 3.8e-70 268.9 226 57.1
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 4.9e-70 268.5 225 60.4
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 6.4e-70 268.1 228 57.9
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 3.2e-69 265.8 227 59.0
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 4.2e-69 265.4 221 57.5
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 1.2e-68 263.8 221 60.6
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 1.2e-68 263.8 227 59.0
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.6e-68 263.5 230 57.0
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 2.1e-68 263.1 236 57.2
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 4.6e-68 261.9 224 57.6
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.3e-67 260.4 218 58.7
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.1e-66 257.3 223 57.8
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.5e-66 256.9 218 58.7
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 4.3e-66 255.4 221 57.9
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 5.6e-66 255.0 223 56.1
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 9.6e-66 254.2 222 57.7
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 9.6e-66 254.2 222 55.0
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 2.1e-65 253.1 225 56.0
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 2.1e-65 253.1 222 56.8
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.1e-64 250.8 224 56.7
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.1e-64 250.8 220 55.0
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.4e-64 250.4 230 54.8
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 4.0e-64 248.8 226 54.4
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 5.3e-64 248.4 222 55.9
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.2e-63 247.3 230 53.9
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.5e-63 246.9 221 56.1
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.5e-63 246.9 223 57.4
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 2.0e-63 246.5 220 55.9
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 2.0e-63 246.5 233 53.2
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 2.0e-63 246.5 173 67.1
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 2.6e-63 246.1 222 55.0
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 2.6e-63 246.1 221 57.0
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 1.3e-62 243.8 231 53.7
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.3e-62 243.8 222 54.5
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 2.2e-62 243.0 224 56.7
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.9e-62 242.7 225 50.2
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 6.4e-62 241.5 238 53.8
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 6.4e-62 241.5 226 54.0
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 8.4e-62 241.1 226 51.8
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.4e-61 240.4 228 51.8
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 1.4e-61 240.4 222 54.5
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 3.2e-61 239.2 225 55.6
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 9.3e-61 237.7 219 55.3
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.6e-60 236.9 223 53.4
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 1.6e-60 236.9 222 55.4
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 2.1e-60 236.5 222 53.2
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 2.7e-60 236.1 233 54.9
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 3.5e-60 235.7 223 52.9
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 3.5e-60 235.7 235 51.1
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.0e-59 234.2 237 48.9
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 1.0e-59 234.2 219 55.3
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 2.3e-59 233.0 227 52.0
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 3.9e-59 232.3 231 51.9
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 6.7e-59 231.5 221 52.0
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 6.7e-59 231.5 223 52.0
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 1.1e-58 230.7 222 53.6
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.1e-58 230.7 223 52.5
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.5e-58 230.3 246 49.6
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 1.9e-58 229.9 221 52.0
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 1.9e-58 229.9 224 52.2
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 4.3e-58 228.8 247 50.2
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 7.4e-58 228.0 231 51.1
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 7.4e-58 228.0 223 52.5
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 7.4e-58 228.0 228 51.3
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 3.7e-57 225.7 222 49.1
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 3.7e-57 225.7 205 56.6
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.1e-56 224.2 226 48.2
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.4e-56 223.0 231 48.9
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 4.0e-56 222.2 223 52.0
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 2.0e-55 219.9 229 51.5
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 2.1e-52 209.9 221 48.9
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 2.7e-52 209.5 187 57.2
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 1.0e-51 207.6 219 48.4
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 1.8e-51 206.8 223 47.5
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.1e-50 204.1 153 64.7
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.3e-49 200.7 137 66.4
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 2.1e-49 199.9 225 49.3
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 2.0e-47 193.4 224 44.2
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 8.4e-46 188.0 158 58.2
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 6.7e-43 178.3 226 45.6
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 3.3e-42 176.0 169 53.8
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 1.6e-41 173.7 226 41.6
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 5.5e-37 158.7 171 53.2
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 9.3e-37 157.9 117 60.7
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 2.1e-36 156.8 265 38.9
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 1.9e-34 150.2 226 38.9
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 4.1e-32 142.5 110 61.8
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 4.2e-29 132.5 189 39.2
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 2.7e-28 129.8 127 51.2
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 2.3e-27 126.7 150 45.3
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 2.6e-26 123.2 184 36.4
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 3.3e-26 122.9 182 35.2
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 7.7e-23 111.7 124 50.0
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 3.9e-19 99.4 91 53.8
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 4.1e-16 89.4 131 42.7
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 4.1e-16 89.4 148 37.8
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 2.0e-15 87.0 63 61.9
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.1e-13 81.3 104 36.5
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 1.2e-12 77.8 94 46.8
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 4.7e-12 75.9 108 40.7
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 4.7e-12 75.9 126 39.7
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 1.5e-10 70.9 94 44.7
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 4.5e-07 59.3 64 43.8


User provided reference genes

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