Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0130300 Salix brachista HOM05D000191 ORTHO05D022140 3.6e-61 238.0 118 100.0
Potri.014G170900 Populus trichocarpa HOM05D000191 ORTHO05D000122 2.0e-35 152.5 85 87.1
Medtr3g080690 Medicago truncatula HOM05D000191 ORTHO05D000122 4.9e-10 68.2 94 38.3
Peaxi162Scf00359g00031 Petunia axillaris HOM05D000191 ORTHO05D000122 6.4e-10 67.8 76 46.1
FAN02G4555 Fragaria x ananassa HOM05D000191 ORTHO05D000876 7.1e-09 64.3 73 49.3
Lj1C801T3 Lonicera japonica HOM05D000191 ORTHO05D000122 1.2e-08 63.5 59 50.8
Thecc.01G200700 Theobroma cacao HOM05D000191 ORTHO05D000122 1.2e-08 63.5 77 46.8
DCAR_021081 Daucus carota HOM05D000191 ORTHO05D000122 2.1e-08 62.8 93 43.0
Lj6g0013184 Lotus japonicus HOM05D000191 ORTHO05D000122 2.7e-08 62.4 82 46.3
Atru.chr6.3439 Acer truncatum HOM05D000191 ORTHO05D000122 3.5e-08 62.0 81 51.9
CSS0010155 Camellia sinensis var. sinensis HOM05D000191 ORTHO05D000122 4.6e-08 61.6 64 57.8
TPR.G11086 Trifolium pratense HOM05D000191 ORTHO05D022140 4.6e-08 61.6 81 43.2
vmacro12053 Vaccinium macrocarpon HOM05D000191 ORTHO05D000122 4.6e-08 61.6 54 59.3
FvH4_6g40270 Fragaria vesca HOM05D000191 ORTHO05D000122 6.0e-08 61.2 63 54.0
Medtr3g081240 Medicago truncatula HOM05D000191 ORTHO05D000122 6.0e-08 61.2 96 37.5
MSTRG.12257 Avicennia marina HOM05D000191 ORTHO05D000122 7.9e-08 60.8 77 42.9
Psat5g108000 Pisum sativum HOM05D000191 ORTHO05D000122 7.9e-08 60.8 83 42.2
FAN09G1789 Fragaria x ananassa HOM05D000191 ORTHO05D000122 1.0e-07 60.5 73 45.2
TAR627G0915 Trochodendron aralioides HOM05D000191 ORTHO05D000122 1.0e-07 60.5 56 55.4
Dinv05332 Davidia involucrata HOM05D000191 ORTHO05D000122 1.3e-07 60.1 59 52.5
Gohir.D07G169500 Gossypium hirsutum HOM05D000191 ORTHO05D000122 1.3e-07 60.1 78 48.7
Gohir.A07G165950 Gossypium hirsutum HOM05D000191 ORTHO05D000122 1.8e-07 59.7 78 47.4
MBI01_g24439_MAGBIO Magnolia biondii HOM05D000191 ORTHO05D000122 1.8e-07 59.7 51 60.8
GSVIVG01030134001 Vitis vinifera HOM05D000191 ORTHO05D000122 1.8e-07 59.7 51 60.8
RcHm_v2.0_Chr2g0155401 Rosa chinensis HOM05D000191 ORTHO05D000122 2.3e-07 59.3 63 52.4
GSVIVG01030133001 Vitis vinifera HOM05D000191 ORTHO05D000122 2.3e-07 59.3 80 50.0
Gorai.001G189600 Gossypium raimondii HOM05D000191 ORTHO05D000122 3.0e-07 58.9 78 47.4
MD17G1120500 Malus domestica HOM05D000191 ORTHO05D000122 3.0e-07 58.9 81 44.4
vmacro12052 Vaccinium macrocarpon HOM05D000191 ORTHO05D000122 3.0e-07 58.9 65 49.2
QL09p001444 Quercus lobata HOM05D000191 ORTHO05D000122 3.9e-07 58.5 91 42.9
PGR044G0358 Punica granatum HOM05D000191 ORTHO05D000122 5.1e-07 58.2 53 58.5
CiPaw.04G178700 Carya illinoinensis HOM05D000191 ORTHO05D000122 6.7e-07 57.8 54 50.0
Rhsim06G0179500 Rhododendron simsii HOM05D000191 ORTHO05D000122 6.7e-07 57.8 66 50.0
Rhsim06G0179700 Rhododendron simsii HOM05D000191 ORTHO05D000122 6.7e-07 57.8 50 58.0
Rhsim06G0180200 Rhododendron simsii HOM05D000191 ORTHO05D000122 6.7e-07 57.8 50 58.0
Actinidia12349 Actinidia chinensis HOM05D000191 ORTHO05D000122 8.7e-07 57.4 62 48.4
Prupe.4G281300 Prunus persica HOM05D000191 ORTHO05D000122 8.7e-07 57.4 63 50.8
Ciclev10017948m.g Citrus clementina HOM05D000191 ORTHO05D000122 1.1e-06 57.0 50 64.0
Prupe.3G193400 Prunus persica HOM05D000191 ORTHO05D000122 1.1e-06 57.0 54 55.6
Eucgr.A01384 Eucalyptus grandis HOM05D000191 ORTHO05D000122 1.5e-06 56.6 51 58.8
Glyma.20G065300 Glycine max HOM05D000191 ORTHO05D000122 1.5e-06 56.6 91 44.0
MD10G1002900 Malus domestica HOM05D000191 ORTHO05D000122 1.5e-06 56.6 51 58.8
QL04p066543 Quercus lobata HOM05D000191 ORTHO05D000122 1.5e-06 56.6 58 53.4
Rhsim06G0179600 Rhododendron simsii HOM05D000191 ORTHO05D000122 1.9e-06 56.2 54 55.6
Atru.chr6.3441 Acer truncatum HOM05D000191 ORTHO05D000122 2.5e-06 55.8 50 60.0
Manes.12G067302 Manihot esculenta HOM05D000191 ORTHO05D000122 3.3e-06 55.5 51 56.9
Prupe.8G004600 Prunus persica HOM05D000191 ORTHO05D000122 3.3e-06 55.5 51 56.9
PGR031G2248 Punica granatum HOM05D000191 ORTHO05D000122 3.3e-06 55.5 54 55.6
TPR.G33264 Trifolium pratense HOM05D000191 ORTHO05D000122 3.3e-06 55.5 81 42.0
Eucgr.A01382 Eucalyptus grandis HOM05D000191 ORTHO05D000122 4.3e-06 55.1 51 58.8
FvH4_2g00470 Fragaria vesca HOM05D000191 ORTHO05D000122 4.3e-06 55.1 51 56.9
FAN24G1610 Fragaria x ananassa HOM05D000191 ORTHO05D002546 4.3e-06 55.1 51 56.9
FAN27G2837 Fragaria x ananassa HOM05D000191 ORTHO05D002546 4.3e-06 55.1 51 56.9
Gohir.D11G154300 Gossypium hirsutum HOM05D000191 ORTHO05D000122 4.3e-06 55.1 54 53.7
Lj1A801T71 Lonicera japonica HOM05D000191 ORTHO05D022140 4.3e-06 55.1 57 50.9
RcHm_v2.0_Chr6g0250461 Rosa chinensis HOM05D000191 ORTHO05D000122 4.3e-06 55.1 51 56.9
Cc05_g01820 Coffea canephora HOM05D000191 ORTHO05D000122 5.6e-06 54.7 60 50.0
MD05G1001700 Malus domestica HOM05D000191 ORTHO05D000122 5.6e-06 54.7 51 56.9
Nn1g07589 Nelumbo nucifera HOM05D000191 ORTHO05D000122 5.6e-06 54.7 64 51.6
Atru.chr6.3440 Acer truncatum HOM05D000191 ORTHO05D000122 7.4e-06 54.3 53 58.5
CSS0021946 Camellia sinensis var. sinensis HOM05D063414 ORTHO05D022140 7.4e-06 54.3 50 56.0
FAN20G2424 Fragaria x ananassa HOM05D000191 ORTHO05D000122 7.4e-06 54.3 51 54.9
Potri.014G171100 Populus trichocarpa HOM05D000191 ORTHO05D000122 7.4e-06 54.3 51 54.9
Gohir.A11G147400 Gossypium hirsutum HOM05D000191 ORTHO05D000122 9.6e-06 53.9 54 51.9
Gorai.007G164400 Gossypium raimondii HOM05D000191 ORTHO05D000122 9.6e-06 53.9 54 51.9
MD15G1138300 Malus domestica HOM05D000191 ORTHO05D000122 9.6e-06 53.9 53 56.6
MD15G1138400 Malus domestica HOM05D000191 ORTHO05D000122 9.6e-06 53.9 53 54.7
Os07g0188700 Oryza sativa ssp. japonica HOM05D000191 ORTHO05D000122 9.6e-06 53.9 61 49.2
QL10p038817 Quercus lobata HOM05D000191 ORTHO05D000122 9.6e-06 53.9 54 55.6


User provided reference genes

Program Settings