Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 1.9e-93 345.9 179 100.0
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 9.9e-87 323.6 180 93.3
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 2.5e-66 255.8 172 78.5
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 4.2e-61 238.4 171 70.2
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 7.9e-60 234.2 171 69.0
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 1.9e-58 229.6 178 66.9
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 1.9e-58 229.6 169 70.4
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 1.9e-58 229.6 161 73.9
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 7.4e-58 227.6 160 75.0
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.7e-57 225.3 165 70.9
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 3.7e-57 225.3 167 71.9
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 3.7e-57 225.3 161 71.4
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 3.7e-57 225.3 161 71.4
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 3.7e-57 225.3 168 69.6
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 4.8e-57 224.9 161 72.7
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 6.2e-57 224.6 171 67.8
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 1.1e-56 223.8 162 72.2
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 1.1e-56 223.8 161 72.7
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 1.4e-56 223.4 171 67.3
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 3.1e-56 222.2 161 74.5
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 3.1e-56 222.2 159 71.7
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 5.3e-56 221.5 159 71.7
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 9.0e-56 220.7 172 67.4
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 9.0e-56 220.7 172 67.4
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 1.2e-55 220.3 172 68.6
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 3.4e-55 218.8 158 72.2
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 3.4e-55 218.8 158 71.5
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 4.5e-55 218.4 172 66.9
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 5.8e-55 218.0 158 74.1
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 7.6e-55 217.6 172 66.3
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 1.0e-54 217.2 162 71.6
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.3e-54 216.9 165 69.7
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 1.7e-54 216.5 161 70.2
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 1.7e-54 216.5 170 67.1
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 2.2e-54 216.1 171 66.1
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 3.8e-54 215.3 172 66.3
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 6.5e-54 214.5 161 67.7
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 6.5e-54 214.5 168 67.3
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 6.5e-54 214.5 161 68.3
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 8.4e-54 214.2 158 69.6
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 8.4e-54 214.2 158 69.6
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 8.4e-54 214.2 172 65.7
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 1.1e-53 213.8 168 64.9
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.1e-53 213.8 160 70.6
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 2.5e-53 212.6 171 66.1
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 3.2e-53 212.2 171 63.2
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 3.2e-53 212.2 171 66.1
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 4.2e-53 211.8 161 68.9
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 4.2e-53 211.8 164 67.1
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 5.5e-53 211.5 167 66.5
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 5.5e-53 211.5 158 69.0
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 7.1e-53 211.1 161 68.9
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 1.6e-52 209.9 159 69.2
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.6e-52 209.9 159 69.2
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 2.1e-52 209.5 171 63.7
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 3.5e-52 208.8 171 64.3
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 4.6e-52 208.4 161 68.3
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 6.1e-52 208.0 168 64.3
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.0e-51 207.2 157 69.4
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 1.0e-51 207.2 159 68.6
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 1.3e-51 206.8 159 68.6
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 1.3e-51 206.8 159 68.6
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 3.0e-51 205.7 161 67.1
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 3.9e-51 205.3 161 63.4
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 3.9e-51 205.3 161 63.4
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 3.9e-51 205.3 161 67.7
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 6.7e-51 204.5 161 67.7
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 1.1e-50 203.8 161 66.5
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.9e-50 203.0 153 65.4
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 1.9e-50 203.0 161 67.1
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 1.9e-50 203.0 175 62.3
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 5.7e-50 201.4 161 66.5
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 7.4e-50 201.1 161 67.1
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 7.4e-50 201.1 172 61.0
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 7.4e-50 201.1 140 72.1
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 9.7e-50 200.7 161 62.7
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 2.2e-49 199.5 161 64.6
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 4.8e-49 198.4 165 62.4
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 6.3e-49 198.0 164 61.0
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 1.1e-48 197.2 161 63.4
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 3.1e-48 195.7 161 62.7
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 4.1e-48 195.3 235 48.9
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 1.2e-47 193.7 161 62.1
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 2.0e-47 193.0 146 73.3
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 2.6e-47 192.6 156 64.7
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 2.6e-47 192.6 171 62.0
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 2.6e-47 192.6 163 60.1
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 2.6e-47 192.6 163 60.7
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 3.4e-47 192.2 165 63.6
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 4.5e-47 191.8 161 60.2
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 7.7e-47 191.0 161 62.1
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 1.7e-46 189.9 200 54.0
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 1.7e-46 189.9 161 62.7
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 1.4e-45 186.8 176 56.2
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 4.2e-45 185.3 144 69.4
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 7.2e-45 184.5 160 60.0
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 2.7e-44 182.6 145 65.5
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 8.8e-43 177.6 142 66.2
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 1.7e-41 173.3 138 63.0
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.7e-41 173.3 153 63.4
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 2.2e-41 172.9 137 64.2
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 2.8e-41 172.6 129 68.2
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 2.4e-40 169.5 151 58.3
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 3.1e-40 169.1 144 61.1
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 2.0e-39 166.4 146 56.2
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 4.5e-39 165.2 172 55.2
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.7e-38 163.3 108 74.1
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-37 160.2 133 66.9
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-32 143.7 134 62.7
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 1.8e-32 143.3 135 56.3
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 1.2e-31 140.6 103 69.9
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 5.9e-31 138.3 85 80.0
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.8e-30 135.6 87 82.8
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.8e-30 135.6 89 71.9
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.1e-28 129.8 78 80.8
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 6.1e-28 128.3 107 64.5
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 3.1e-24 115.9 133 45.1
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 5.3e-24 115.2 126 56.3
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 9.1e-24 114.4 80 72.5
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 2.2e-22 109.8 97 60.8
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 5.0e-22 108.6 115 54.8
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 5.5e-21 105.1 166 36.7
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.2e-20 104.0 66 74.2
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.0e-19 100.9 54 92.6
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 2.2e-17 93.2 55 81.8
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 4.5e-15 85.5 53 75.5
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.9e-14 82.8 52 80.8
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.2e-13 79.3 73 61.6
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.2e-13 79.3 73 61.6
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 3.6e-12 75.9 58 65.5
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 5.7e-10 68.6 85 35.3


User provided reference genes

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