Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0124000 Salix brachista HOM05D005150 ORTHO05D006070 4.2e-56 221.1 108 100.0
Potri.002G222900 Populus trichocarpa HOM05D005150 ORTHO05D006070 9.9e-50 199.9 108 91.7
Potri.014G162400 Populus trichocarpa HOM05D005150 ORTHO05D006070 1.1e-48 196.4 108 88.9
Manes.13G063792 Manihot esculenta HOM05D005150 ORTHO05D006070 2.2e-36 155.6 114 71.9
Manes.12G062667 Manihot esculenta HOM05D005150 ORTHO05D006070 3.8e-33 144.8 113 69.9
Manes.12G062700 Manihot esculenta HOM05D005150 ORTHO05D006070 3.8e-33 144.8 113 69.9
QL08p029214 Quercus lobata HOM05D005150 ORTHO05D006070 1.4e-32 142.9 108 64.8
Nn1g07416 Nelumbo nucifera HOM05D005150 ORTHO05D006070 2.5e-32 142.1 109 64.2
Thecc.01G187900 Theobroma cacao HOM05D005150 ORTHO05D006070 5.5e-32 141.0 113 64.6
Duzib133G1369 Durio zibethinus HOM05D005150 ORTHO05D006070 7.2e-32 140.6 112 63.4
Cpa.g.sc136.7 Carica papaya HOM05D005150 ORTHO05D006070 1.6e-31 139.4 113 62.8
CiPaw.03G276700 Carya illinoinensis HOM05D005150 ORTHO05D006070 1.0e-30 136.7 110 63.6
RcHm_v2.0_Chr2g0156971 Rosa chinensis HOM05D005150 ORTHO05D006070 1.5e-29 132.9 111 60.4
Cfa014266 Carpinus fangiana HOM05D005150 ORTHO05D006070 3.3e-29 131.7 109 63.3
Prupe.3G204400 Prunus persica HOM05D005150 ORTHO05D006070 3.3e-29 131.7 119 58.8
Hma1.2p1_0133F.1_g061080 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 4.3e-29 131.3 109 58.7
Haze_12715 Corylus avellana HOM05D005150 ORTHO05D006070 9.7e-29 130.2 110 63.6
Atru.chr6.3335 Acer truncatum HOM05D005150 ORTHO05D006070 2.2e-28 129.0 123 56.1
Actinidia21452 Actinidia chinensis HOM05D005150 ORTHO05D006070 1.1e-27 126.7 111 55.9
Rhsim06G0172300 Rhododendron simsii HOM05D005150 ORTHO05D006070 1.4e-27 126.3 110 60.9
Glyma.13G073800 Glycine max HOM05D005150 ORTHO05D006070 4.1e-27 124.8 109 56.9
Hma1.2p1_0405F.1_g145660 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 4.1e-27 124.8 109 56.9
FAN05G2177 Fragaria x ananassa HOM05D005150 ORTHO05D006070 5.3e-27 124.4 111 57.7
CAN.G584.30 Capsicum annuum HOM05D005150 ORTHO05D006070 6.9e-27 124.0 108 56.5
Phvul.008G205400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 1.2e-26 123.2 108 63.0
VMungo0647G0767 Vigna mungo HOM05D005150 ORTHO05D006070 1.2e-26 123.2 108 63.0
Rhsim06G0172200 Rhododendron simsii HOM05D005150 ORTHO05D006070 1.5e-26 122.9 110 58.2
Gohir.A07G189900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 2.6e-26 122.1 110 58.2
Gohir.D07G196100 Gossypium hirsutum HOM05D005150 ORTHO05D006070 2.6e-26 122.1 110 58.2
Gorai.001G219600 Gossypium raimondii HOM05D005150 ORTHO05D006070 2.6e-26 122.1 110 58.2
MELO3C018891.2 Cucumis melo HOM05D005150 ORTHO05D006070 3.4e-26 121.7 111 55.9
CsaV3_7G002850 Cucumis sativus L. HOM05D005150 ORTHO05D006070 3.4e-26 121.7 110 56.4
HanXRQChr10g0306371 Helianthus annuus HOM05D005150 ORTHO05D006070 3.4e-26 121.7 109 56.0
FAN02G0634 Fragaria x ananassa HOM05D005150 ORTHO05D006070 4.5e-26 121.3 111 56.8
vmacro12127 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 4.5e-26 121.3 110 57.3
Lsat_1_v5_gn_9_105581 Lactuca sativa HOM05D005150 ORTHO05D006070 5.9e-26 120.9 108 58.3
DCAR_032165 Daucus carota HOM05D005150 ORTHO05D006070 7.7e-26 120.6 106 57.5
Phvul.006G020400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 1.0e-25 120.2 109 55.0
ClCG02G002530 Citrullus lanatus HOM05D005150 ORTHO05D006070 1.3e-25 119.8 114 57.0
ClCG02G002570 Citrullus lanatus HOM05D005150 ORTHO05D006070 1.3e-25 119.8 114 57.0
TAR629G0945 Trochodendron aralioides HOM05D005150 ORTHO05D006070 1.7e-25 119.4 97 60.8
CSS0010457 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 2.2e-25 119.0 111 56.8
CSS0040672 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 2.2e-25 119.0 111 56.8
arahy.Tifrunner.gnm1.ann1.CR4AH5 Arachis hypogaea HOM05D005150 ORTHO05D006070 2.9e-25 118.6 109 57.8
arahy.Tifrunner.gnm1.ann1.V5U7H6 Arachis hypogaea HOM05D005150 ORTHO05D006070 2.9e-25 118.6 109 57.8
Glyma.14G039800 Glycine max HOM05D005150 ORTHO05D006070 3.8e-25 118.2 109 60.6
Gohir.A07G176012 Gossypium hirsutum HOM05D005150 ORTHO05D006070 5.0e-25 117.9 108 55.6
Nn1g03285 Nelumbo nucifera HOM05D005150 ORTHO05D006070 5.0e-25 117.9 112 55.4
DCAR_012901 Daucus carota HOM05D005150 ORTHO05D006070 1.1e-24 116.7 109 56.9
Lsat_1_v5_gn_7_95641 Lactuca sativa HOM05D005150 ORTHO05D006070 1.1e-24 116.7 108 56.5
Duzib138G1375 Durio zibethinus HOM05D005150 ORTHO05D006070 1.4e-24 116.3 106 56.6
Gohir.A11G150900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 1.4e-24 116.3 110 57.3
Gorai.007G167900 Gossypium raimondii HOM05D005150 ORTHO05D006070 1.4e-24 116.3 110 58.2
Gohir.D11G157400 Gossypium hirsutum HOM05D005150 ORTHO05D006070 3.2e-24 115.2 110 57.3
Lj6g0009976 Lotus japonicus HOM05D005150 ORTHO05D006070 3.2e-24 115.2 109 55.0
FvH4_6g41440 Fragaria vesca HOM05D005150 ORTHO05D006070 4.2e-24 114.8 103 56.3
ECA234G4664 Erigeron canadensis HOM05D005150 ORTHO05D006070 5.5e-24 114.4 110 54.5
HanXRQChr17g0535431 Helianthus annuus HOM05D005150 ORTHO05D006070 9.4e-24 113.6 98 55.1
MD09G1119700 Malus domestica HOM05D005150 ORTHO05D006070 9.4e-24 113.6 123 52.0
Gorai.001G194000 Gossypium raimondii HOM05D005150 ORTHO05D006070 1.2e-23 113.2 107 55.1
Sed0026674 Sechium edule HOM05D005150 ORTHO05D006070 2.1e-23 112.5 110 57.3
Rhsim04G0044800 Rhododendron simsii HOM05D005150 ORTHO05D006070 7.9e-23 110.5 105 55.2
Sed0012024 Sechium edule HOM05D005150 ORTHO05D006070 1.0e-22 110.2 108 53.7
Medtr7g058970 Medicago truncatula HOM05D005150 ORTHO05D006070 1.4e-22 109.8 113 50.4
Dinv07836 Davidia involucrata HOM05D005150 ORTHO05D006070 1.8e-22 109.4 103 56.3
vmacro12128 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 2.3e-22 109.0 110 51.8
Lsat_1_v5_gn_5_124661 Lactuca sativa HOM05D005150 ORTHO05D006070 6.7e-22 107.5 109 54.1
Oeu029950.1 Olea europaea HOM05D005150 ORTHO05D006070 6.7e-22 107.5 109 50.5
TPR.G12632 Trifolium pratense HOM05D005150 ORTHO05D006070 1.1e-21 106.7 96 56.2
COL.COLO4_25851 Corchorus olitorius HOM05D005150 ORTHO05D006070 3.3e-21 105.1 87 60.9
MD17G1110500 Malus domestica HOM05D005150 ORTHO05D006070 3.3e-21 105.1 123 50.4
Aqoxy1G04044 Aquilegia oxysepala HOM05D005150 ORTHO05D006070 4.4e-21 104.8 111 50.5
LjContig00564g0005952 Lotus japonicus HOM05D005150 ORTHO05D006070 4.4e-21 104.8 109 55.0
Lalb_Chr19g0125521 Lupinus albus HOM05D005150 ORTHO05D006070 5.7e-21 104.4 111 53.2
HanXRQChr03g0075721 Helianthus annuus HOM05D005150 ORTHO05D006070 7.4e-21 104.0 108 51.9
PGR142G3730 Punica granatum HOM05D005150 ORTHO05D006070 7.4e-21 104.0 110 54.5
AUR62005176 Chenopodium quinoa HOM05D005150 ORTHO05D006070 2.8e-20 102.1 109 51.4
Ah.14g082900 Amaranthus hybridus HOM05D005150 ORTHO05D006070 4.8e-20 101.3 113 50.4
Ciclev10017035m.g Citrus clementina HOM05D005150 ORTHO05D006070 4.8e-20 101.3 113 54.9
Glyma.02G276100 Glycine max HOM05D005150 ORTHO05D006070 4.8e-20 101.3 112 56.2
AUR62017541 Chenopodium quinoa HOM05D005150 ORTHO05D006070 8.2e-20 100.5 117 50.4
AUR62015079 Chenopodium quinoa HOM05D005150 ORTHO05D006070 1.1e-19 100.1 117 50.4
Eucgr.K00667 Eucalyptus grandis HOM05D005150 ORTHO05D006070 1.1e-19 100.1 97 61.9
Sopen07g002670 Solanum pennellii HOM05D005150 ORTHO05D006070 1.1e-19 100.1 94 53.2
Solyc07g006590.1 Solanum lycopersicum HOM05D005150 ORTHO05D006070 1.4e-19 99.8 93 52.7
ECA240G3606 Erigeron canadensis HOM05D005150 ORTHO05D006070 1.8e-19 99.4 109 48.6
AUR62000791 Chenopodium quinoa HOM05D005150 ORTHO05D006070 2.4e-19 99.0 109 50.5
HanXRQChr04g0126761 Helianthus annuus HOM05D005150 ORTHO05D006070 2.4e-19 99.0 99 52.5
Lalb_Chr04g0249481 Lupinus albus HOM05D005150 ORTHO05D006070 3.1e-19 98.6 111 47.7
AL7G44580 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 4.1e-19 98.2 108 49.1
TPR.G14637 Trifolium pratense HOM05D005150 ORTHO05D006070 4.1e-19 98.2 114 55.3
PSO541G4821 Papaver somniferum HOM05D005150 ORTHO05D006070 6.9e-19 97.4 110 48.2
Medtr5g088550 Medicago truncatula HOM05D005150 ORTHO05D006070 9.1e-19 97.1 107 52.3
Sc06g0009750 Simmondsia chinensis HOM05D005150 ORTHO05D006070 1.5e-18 96.3 110 52.7
CSS0044074 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 3.4e-18 95.1 106 49.1
THA.LOC104826613 Tarenaya hassleriana HOM05D005150 ORTHO05D006070 1.0e-17 93.6 109 49.5
Ah.01g002180 Amaranthus hybridus HOM05D005150 ORTHO05D006070 1.7e-17 92.8 100 43.0
TAR624G1342 Trochodendron aralioides HOM05D005150 ORTHO05D006070 1.7e-17 92.8 98 51.0
Aa31sc697G10 Aethionema arabicum HOM05D005150 ORTHO05D006070 3.8e-17 91.7 113 46.9
A04p09910 Brassica napus HOM05D005150 ORTHO05D006070 3.8e-17 91.7 109 48.6
BraA04t16654Z Brassica rapa HOM05D005150 ORTHO05D006070 3.8e-17 91.7 109 48.6
Carub.0007s3148 Capsella rubella HOM05D005150 ORTHO05D006070 3.8e-17 91.7 113 46.9
DCAR_021114 Daucus carota HOM05D005150 ORTHO05D006070 5.0e-17 91.3 93 55.9
C04p43410 Brassica napus HOM05D005150 ORTHO05D006070 6.5e-17 90.9 109 48.6
BcaC02g09491 Brassica carinata HOM05D005150 ORTHO05D006070 1.1e-16 90.1 108 46.3
BolC4t25919H Brassica oleracea HOM05D005150 ORTHO05D006070 1.1e-16 90.1 109 47.7
Oeu040478.2 Olea europaea HOM05D005150 ORTHO05D006070 1.1e-16 90.1 115 44.3
PSO675G4632 Papaver somniferum HOM05D005150 ORTHO05D006070 1.1e-16 90.1 110 46.4
ClCG02G009450 Citrullus lanatus HOM05D005150 ORTHO05D006070 1.9e-16 89.4 111 45.9
Sp7g06500 Schrenkiella parvula HOM05D005150 ORTHO05D006070 1.9e-16 89.4 113 46.0
Lj1g0017552 Lotus japonicus HOM05D005150 ORTHO05D006070 2.5e-16 89.0 93 50.5
CARHR216910 Cardamine hirsuta HOM05D005150 ORTHO05D006070 3.2e-16 88.6 112 46.4
MELO3C019368.2 Cucumis melo HOM05D005150 ORTHO05D006070 5.5e-16 87.8 111 42.3
CsaV3_6G009360 Cucumis sativus L. HOM05D005150 ORTHO05D006070 5.5e-16 87.8 111 44.1
Oeu012338.1 Olea europaea HOM05D005150 ORTHO05D006070 5.5e-16 87.8 99 51.5
EL10Ac9g22759 Beta vulgaris HOM05D005150 ORTHO05D006070 7.2e-16 87.4 117 47.0
ECA236G2208 Erigeron canadensis HOM05D005150 ORTHO05D006070 7.2e-16 87.4 99 48.5
THA.LOC104808855 Tarenaya hassleriana HOM05D005150 ORTHO05D006070 2.1e-15 85.9 109 47.7
AL3G42390 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 3.6e-15 85.1 110 45.5
AT2G04795 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 6.1e-15 84.3 110 46.4
EL10Ac4g09390 Beta vulgaris HOM05D005150 ORTHO05D006070 6.1e-15 84.3 102 43.1
BcaC01g06899 Brassica carinata HOM05D005150 ORTHO05D006070 1.8e-14 82.8 108 43.5
A03p44460 Brassica napus HOM05D005150 ORTHO05D006070 2.3e-14 82.4 108 43.5
C03p55240 Brassica napus HOM05D005150 ORTHO05D006070 2.3e-14 82.4 108 43.5
BolC3t17797H Brassica oleracea HOM05D005150 ORTHO05D006070 2.3e-14 82.4 108 43.5
BraA03t13579Z Brassica rapa HOM05D005150 ORTHO05D006070 2.3e-14 82.4 108 43.5
BcaB08g34491 Brassica carinata HOM05D005150 ORTHO05D006070 6.7e-14 80.9 108 42.6
Sp3g23410 Schrenkiella parvula HOM05D005150 ORTHO05D006070 1.5e-13 79.7 108 41.7
AT5G35732 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 2.6e-13 79.0 99 42.4
TWI36G0863 Tripterygium wilfordii HOM05D005150 ORTHO05D006070 4.4e-13 78.2 97 45.4
Sed0002977 Sechium edule HOM05D005150 ORTHO05D006070 5.7e-13 77.8 109 44.0
Hund24140 Selenicereus undatus HOM05D005150 ORTHO05D006070 5.7e-13 77.8 107 41.1
CARHR102770 Cardamine hirsuta HOM05D005150 ORTHO05D006070 9.7e-13 77.0 108 40.7
Aa31sc53G30 Aethionema arabicum HOM05D005150 ORTHO05D006070 2.2e-12 75.9 96 42.7
Sed0014772 Sechium edule HOM05D005150 ORTHO05D006070 2.2e-12 75.9 112 42.0
FAN14G4944 Fragaria x ananassa HOM05D008097 ORTHO05D006070 2.8e-12 75.5 56 55.4
BcaB06g26977 Brassica carinata HOM05D025437 ORTHO05D006070 3.7e-12 75.1 97 45.4
Migut.M00011 Erythranthe guttata HOM05D005150 ORTHO05D006070 4.8e-12 74.7 99 41.4
Sc21g0000930 Simmondsia chinensis HOM05D005150 ORTHO05D006070 3.1e-11 72.0 95 40.0
Nitab4.5_0000244g0100 Nicotiana tabacum HOM05D005150 ORTHO05D006070 1.2e-10 70.1 83 41.0
Peaxi162Scf00942g00037 Petunia axillaris HOM05D005150 ORTHO05D006070 1.2e-10 70.1 91 42.9
Ah.06g189600 Amaranthus hybridus HOM05D005150 ORTHO05D006070 3.8e-09 65.1 93 43.0
Carub.0003s2640 Capsella rubella HOM05D005150 ORTHO05D006070 9.4e-08 60.5 94 42.6
ATR0712G027 Amborella trichopoda HOM05D005150 ORTHO05D006070 2.1e-07 59.3 120 35.0
Peaxi162Scf32072g00001 Petunia axillaris HOM05D005150 ORTHO05D006070 6.1e-07 57.8 57 49.1


User provided reference genes

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