Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 7.8e-152 540.4 271 100.0
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 8.8e-87 324.3 269 67.3
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 2.0e-75 286.6 267 59.2
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.4e-71 273.9 267 57.3
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 3.0e-71 272.7 267 57.3
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.5e-70 270.4 267 57.7
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 2.0e-70 270.0 267 56.9
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 2.0e-70 270.0 266 55.6
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 5.7e-70 268.5 267 56.6
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.2e-69 266.5 265 57.0
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 4.1e-68 262.3 266 54.1
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 5.3e-68 261.9 266 54.1
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.2e-67 260.8 268 54.9
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.2e-67 260.8 264 55.7
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 2.0e-67 260.0 268 54.5
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 4.5e-67 258.8 205 67.3
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 1.3e-66 257.3 266 54.1
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.3e-66 257.3 268 55.2
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.7e-66 256.9 267 53.6
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.2e-66 256.5 266 54.5
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 2.9e-66 256.1 262 55.0
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 3.8e-66 255.8 266 54.1
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.5e-65 253.8 267 54.7
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 1.5e-65 253.8 268 52.6
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 2.5e-65 253.1 175 73.7
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 2.5e-65 253.1 266 53.4
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 5.5e-65 251.9 268 53.4
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.6e-64 250.4 203 64.5
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 2.1e-64 250.0 203 64.5
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 2.7e-64 249.6 207 64.3
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 4.7e-64 248.8 269 52.8
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 8.0e-64 248.1 259 53.3
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.0e-63 247.7 205 62.9
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 1.4e-63 247.3 178 70.8
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.4e-63 247.3 204 63.2
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.4e-63 247.3 268 51.9
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 3.0e-63 246.1 203 63.5
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 5.2e-63 245.4 268 52.2
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 6.8e-63 245.0 222 59.0
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 1.5e-62 243.8 205 61.0
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 3.4e-62 242.7 206 62.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.4e-62 242.7 265 51.3
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 3.4e-62 242.7 267 50.9
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 3.4e-62 242.7 266 51.1
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 4.4e-62 242.3 180 66.7
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 5.7e-62 241.9 267 50.9
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 9.8e-62 241.1 303 47.9
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.3e-61 240.7 207 60.9
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.7e-61 240.4 266 50.4
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 2.2e-61 240.0 266 50.4
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 2.2e-61 240.0 266 52.3
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 4.8e-61 238.8 268 50.7
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 8.3e-61 238.0 207 61.4
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.8e-60 236.9 266 50.0
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.8e-60 236.9 206 60.2
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 2.4e-60 236.5 205 59.5
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 9.1e-60 234.6 269 49.8
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.2e-59 234.2 266 50.4
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.2e-59 234.2 205 57.6
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.6e-59 233.8 175 66.9
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 4.5e-59 232.3 266 49.6
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 4.5e-59 232.3 268 49.6
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 5.9e-59 231.9 205 59.5
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 7.7e-59 231.5 268 49.6
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.3e-58 230.7 268 49.3
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.7e-58 230.3 266 48.9
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 5.0e-58 228.8 266 49.2
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 8.6e-58 228.0 206 59.2
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 8.6e-58 228.0 221 54.8
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.5e-57 227.3 205 58.5
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 7.2e-57 224.9 206 58.7
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.8e-56 223.0 389 38.3
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 5.2e-55 218.8 206 58.3
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.2e-54 217.6 306 44.4
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.2e-54 217.6 306 44.4
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.5e-54 217.2 207 56.5
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.1e-52 209.5 242 51.2
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 5.4e-52 208.8 164 62.8
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 5.4e-52 208.8 213 53.1
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.6e-51 207.2 203 57.1
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 4.5e-51 205.7 164 64.6
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 2.3e-50 203.4 214 53.3
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.6e-48 197.2 269 46.1
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 6.1e-48 195.3 173 57.2
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 9.8e-46 188.0 112 76.8
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 6.0e-43 178.7 136 64.7
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 2.5e-41 173.3 203 46.3
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 9.5e-41 171.4 203 45.8
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 6.0e-35 152.1 203 44.8
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.3e-34 151.0 211 44.5
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 2.3e-34 150.2 212 44.3
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 1.1e-33 147.9 210 43.8
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.5e-33 147.5 156 53.2
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.5e-33 146.7 149 55.7
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 1.2e-32 144.4 221 43.9
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 3.4e-30 136.3 204 40.7
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 4.1e-28 129.4 110 60.0
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 1.0e-26 124.8 82 65.9
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.1e-24 117.1 296 28.4
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.2e-22 111.3 123 54.5
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.5e-17 94.4 130 46.9
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.4e-14 83.2 56 69.6
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 5.8e-14 82.4 153 36.6
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 4.9e-13 79.3 123 43.1
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 1.3e-08 64.7 57 56.1
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 2.1e-08 63.9 199 28.6
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 6.2e-08 62.4 41 63.4
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-07 60.5 34 76.5
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 5.8e-06 55.8 126 34.9


User provided reference genes

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