Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0097900 Salix brachista HOM05D000141 ORTHO05D036973 4.6e-106 387.9 194 100.0
Potri.001G436200 Populus trichocarpa HOM05D000141 ORTHO05D001311 1.2e-21 107.5 66 80.3
Sabra11G0126100 Salix brachista HOM05D000141 ORTHO05D001311 3.0e-20 102.8 66 74.2
Potri.011G140000 Populus trichocarpa HOM05D000141 ORTHO05D001311 3.9e-20 102.4 66 74.2
Atru.chr2.1843 Acer truncatum HOM05D000141 ORTHO05D001311 5.6e-19 98.6 76 67.1
Prupe.4G144400 Prunus persica HOM05D000141 ORTHO05D001311 1.2e-18 97.4 66 71.2
RcHm_v2.0_Chr5g0027091 Rosa chinensis HOM05D000141 ORTHO05D001311 2.1e-18 96.7 66 71.2
Cfa019444 Carpinus fangiana HOM05D000141 ORTHO05D001311 4.7e-18 95.5 61 73.8
Ciclev10018793m.g Citrus clementina HOM05D000141 ORTHO05D001311 1.4e-17 94.0 76 61.8
DCAR_019643 Daucus carota HOM05D000141 ORTHO05D001311 1.4e-17 94.0 60 76.7
FvH4_3g16110 Fragaria vesca HOM05D000141 ORTHO05D001311 1.8e-17 93.6 61 73.8
FAN11G1205 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.8e-17 93.6 61 73.8
FAN16G3344 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.8e-17 93.6 61 73.8
FAN25G3242 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.8e-17 93.6 61 73.8
MD05G1213600 Malus domestica HOM05D000141 ORTHO05D001311 1.8e-17 93.6 66 68.2
Haze_08513 Corylus avellana HOM05D000141 ORTHO05D001311 3.1e-17 92.8 60 71.7
ClCG07G010630 Citrullus lanatus HOM05D000141 ORTHO05D001311 6.9e-17 91.7 58 74.1
COL.COLO4_07051 Corchorus olitorius HOM05D000141 ORTHO05D001311 6.9e-17 91.7 60 70.0
Dinv26638 Davidia involucrata HOM05D000141 ORTHO05D001311 1.2e-16 90.9 60 73.3
MELO3C016173.2 Cucumis melo HOM05D000141 ORTHO05D001311 1.5e-16 90.5 58 74.1
CANSAT56G4238 Cannabis sativa HOM05D000141 ORTHO05D001311 2.0e-16 90.1 58 72.4
CiPaw.12G006000 Carya illinoinensis HOM05D000141 ORTHO05D001311 2.6e-16 89.7 66 65.2
MD10G1197400 Malus domestica HOM05D000141 ORTHO05D001311 2.6e-16 89.7 66 68.2
Manes.03G090900 Manihot esculenta HOM05D000141 ORTHO05D001311 2.6e-16 89.7 66 63.6
Manes.15G101400 Manihot esculenta HOM05D000141 ORTHO05D001311 3.4e-16 89.4 66 63.6
GSVIVG01020503001 Vitis vinifera HOM05D000141 ORTHO05D001311 3.4e-16 89.4 63 68.3
Nn3g20438 Nelumbo nucifera HOM05D000141 ORTHO05D001311 4.4e-16 89.0 58 67.2
CsaV3_4G007670 Cucumis sativus L. HOM05D000141 ORTHO05D001311 5.8e-16 88.6 58 70.7
PSO541G4054 Papaver somniferum HOM05D000141 ORTHO05D001311 5.8e-16 88.6 60 66.7
Thecc.07G157900 Theobroma cacao HOM05D000141 ORTHO05D001311 5.8e-16 88.6 60 68.3
Lalb_Chr25g0285251 Lupinus albus HOM05D000141 ORTHO05D001311 7.6e-16 88.2 60 71.7
PGR031G0118 Punica granatum HOM05D000141 ORTHO05D001311 9.9e-16 87.8 60 71.7
Gohir.A01G036700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.3e-15 87.4 60 66.7
Duzib213G0002 Durio zibethinus HOM05D000141 ORTHO05D001311 1.7e-15 87.0 60 66.7
TWI38G2413 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 1.7e-15 87.0 58 69.0
Actinidia20594 Actinidia chinensis HOM05D000141 ORTHO05D001311 2.2e-15 86.7 60 68.3
Lj1C805T5 Lonicera japonica HOM05D000141 ORTHO05D001311 2.2e-15 86.7 60 73.3
TAR624G0806 Trochodendron aralioides HOM05D000141 ORTHO05D001311 2.2e-15 86.7 70 57.1
Sed0016222 Sechium edule HOM05D000141 ORTHO05D001311 2.9e-15 86.3 58 69.0
CANSAT56G1181 Cannabis sativa HOM05D000141 ORTHO05D001311 3.8e-15 85.9 58 69.0
SGA_v2.0_scaffold181G39773 Striga asiatica HOM05D000141 ORTHO05D001311 3.8e-15 85.9 66 63.6
Sed0022606 Sechium edule HOM05D000141 ORTHO05D001311 4.9e-15 85.5 58 69.0
Cc05_g10030 Coffea canephora HOM05D000141 ORTHO05D001311 6.4e-15 85.1 66 59.1
Rhsim06G0183600 Rhododendron simsii HOM05D000141 ORTHO05D001311 6.4e-15 85.1 60 66.7
Gohir.D01G024000 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.1e-14 84.3 60 65.0
Gorai.002G032500 Gossypium raimondii HOM05D000141 ORTHO05D001311 1.1e-14 84.3 60 65.0
vmacro12029 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 1.1e-14 84.3 66 62.1
AL2G31920 Arabidopsis lyrata HOM05D000141 ORTHO05D001311 1.4e-14 84.0 60 71.7
TAR512G0002 Trochodendron aralioides HOM05D000141 ORTHO05D001311 1.4e-14 84.0 66 56.1
Peaxi162Scf00000g00587 Petunia axillaris HOM05D000141 ORTHO05D001311 1.9e-14 83.6 66 63.6
QL04p072968 Quercus lobata HOM05D000141 ORTHO05D001311 2.4e-14 83.2 66 60.6
Oeu012710.1 Olea europaea HOM05D000141 ORTHO05D036973 3.2e-14 82.8 60 66.7
THA.LOC104812281 Tarenaya hassleriana HOM05D000141 ORTHO05D001311 3.2e-14 82.8 60 70.0
Aqoxy4G00059 Aquilegia oxysepala HOM05D000141 ORTHO05D001311 4.2e-14 82.4 61 63.9
AT1G72250 Arabidopsis thaliana HOM05D000141 ORTHO05D001311 4.2e-14 82.4 60 70.0
BraA02t06835Z Brassica rapa HOM05D000141 ORTHO05D001311 4.2e-14 82.4 87 56.3
A02p17850 Brassica napus HOM05D000141 ORTHO05D001311 5.4e-14 82.0 60 71.7
BolC2t09016H Brassica oleracea HOM05D000141 ORTHO05D001311 5.4e-14 82.0 60 71.7
Sp5g27340 Schrenkiella parvula HOM05D000141 ORTHO05D001311 5.4e-14 82.0 60 71.7
BcaB03g14969 Brassica carinata HOM05D000141 ORTHO05D001311 7.1e-14 81.6 65 64.6
Nitab4.5_0000639g0260 Nicotiana tabacum HOM05D000141 ORTHO05D001311 7.1e-14 81.6 67 64.2
BcaB05g24734 Brassica carinata HOM05D000141 ORTHO05D001311 9.3e-14 81.3 60 70.0
BcaC03g15359 Brassica carinata HOM05D000141 ORTHO05D001311 9.3e-14 81.3 59 72.9
C02p29670 Brassica napus HOM05D000141 ORTHO05D001311 9.3e-14 81.3 59 72.9
Phvul.005G054500 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 9.3e-14 81.3 60 70.0
VMungo1080G0426 Vigna mungo HOM05D000141 ORTHO05D001311 9.3e-14 81.3 60 68.3
BcaC08g46672 Brassica carinata HOM05D000141 ORTHO05D001311 1.2e-13 80.9 65 64.6
A07p38380 Brassica napus HOM05D000141 ORTHO05D001311 1.2e-13 80.9 65 64.6
C06p46420 Brassica napus HOM05D000141 ORTHO05D001311 1.2e-13 80.9 65 64.6
BolC6t39689H Brassica oleracea HOM05D000141 ORTHO05D001311 1.2e-13 80.9 65 64.6
BraA07t31399Z Brassica rapa HOM05D000141 ORTHO05D001311 1.2e-13 80.9 65 64.6
CAN.G164.4 Capsicum annuum HOM05D000141 ORTHO05D001311 1.2e-13 80.9 67 62.7
PSO675G5927 Papaver somniferum HOM05D000141 ORTHO05D001311 1.2e-13 80.9 70 52.9
arahy.Tifrunner.gnm1.ann1.RXP99Y Arachis hypogaea HOM05D000141 ORTHO05D001311 1.6e-13 80.5 58 65.5
Thecc.07G158700 Theobroma cacao HOM05D000141 ORTHO05D001311 1.6e-13 80.5 60 63.3
Actinidia12333 Actinidia chinensis HOM05D000141 ORTHO05D001311 2.1e-13 80.1 60 61.7
Glyma.08G174300 Glycine max HOM05D000141 ORTHO05D001311 2.1e-13 80.1 60 68.3
Glyma.15G252800 Glycine max HOM05D000141 ORTHO05D001311 2.1e-13 80.1 60 68.3
CARHR065110 Cardamine hirsuta HOM05D000141 ORTHO05D001311 2.7e-13 79.7 60 68.3
Migut.M00669 Erythranthe guttata HOM05D000141 ORTHO05D001311 2.7e-13 79.7 66 59.1
Eucgr.F03192 Eucalyptus grandis HOM05D000141 ORTHO05D001311 2.7e-13 79.7 61 60.7
MSTRG.14999 Avicennia marina HOM05D000141 ORTHO05D001311 3.5e-13 79.3 66 57.6
SalBow8G4088 Salvia bowleyana HOM05D000141 ORTHO05D001311 3.5e-13 79.3 66 59.1
arahy.Tifrunner.gnm1.ann1.36GBYI Arachis hypogaea HOM05D000141 ORTHO05D001311 4.6e-13 79.0 58 63.8
Carub.0002s1906 Capsella rubella HOM05D000141 ORTHO05D001311 4.6e-13 79.0 60 68.3
Thhalv10018049m.g Eutrema salsugineum HOM05D000141 ORTHO05D001311 4.6e-13 79.0 60 68.3
HanXRQChr10g0306651 Helianthus annuus HOM05D000141 ORTHO05D001311 4.6e-13 79.0 94 48.9
Medtr2g069950 Medicago truncatula HOM05D000141 ORTHO05D001311 4.6e-13 79.0 60 65.0
TPR.G27157 Trifolium pratense HOM05D000141 ORTHO05D001311 4.6e-13 79.0 60 65.0
Lj3g0018650 Lotus japonicus HOM05D000141 ORTHO05D001311 7.8e-13 78.2 54 68.5
Aa31LG4G2630 Aethionema arabicum HOM05D000141 ORTHO05D001311 1.0e-12 77.8 60 66.7
ECA234G2348 Erigeron canadensis HOM05D000141 ORTHO05D001311 1.0e-12 77.8 60 65.0
HPP92_001888 Vanilla planifolia HOM05D000141 ORTHO05D001311 1.3e-12 77.4 66 56.1
Lalb_Chr20g0108861 Lupinus albus HOM05D000141 ORTHO05D001311 1.7e-12 77.0 61 67.2
MBI02_g29871_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001311 1.7e-12 77.0 70 51.4
Psat1g009760 Pisum sativum HOM05D000141 ORTHO05D001311 1.7e-12 77.0 60 61.7
Solyc12g011290.2 Solanum lycopersicum HOM05D000141 ORTHO05D001311 1.7e-12 77.0 67 59.7
Cpa.g.sc229.5 Carica papaya HOM05D000141 ORTHO05D001311 2.3e-12 76.6 60 63.3
Sopen12g006620 Solanum pennellii HOM05D000141 ORTHO05D001311 3.0e-12 76.3 67 59.7
Ca_03483_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001311 3.9e-12 75.9 60 61.7
Lsat_1_v5_gn_5_121381 Lactuca sativa HOM05D000141 ORTHO05D001311 3.9e-12 75.9 55 67.3
unitig_46.g18305 Utricularia gibba HOM05D000141 ORTHO05D001311 5.1e-12 75.5 72 51.4
EL10Ac4g08530 Beta vulgaris HOM05D000141 ORTHO05D001311 6.6e-12 75.1 56 60.7
AUR62042369 Chenopodium quinoa HOM05D000141 ORTHO05D001311 8.7e-12 74.7 68 51.5
AUR62037929 Chenopodium quinoa HOM05D000141 ORTHO05D001311 7.3e-11 71.6 68 50.0
Sabra15G0089800 Salix brachista HOM05D000972 ORTHO05D007902 3.6e-10 69.3 35 91.4
TPR.G22621 Trifolium pratense HOM05D000141 ORTHO05D036973 3.4e-08 62.8 58 55.2
Zm00001eb031820 Zea mays HOM05D000141 ORTHO05D001311 3.2e-06 56.2 58 51.7
Zm00001eb134790 Zea mays HOM05D000141 ORTHO05D001311 3.2e-06 56.2 65 47.7


User provided reference genes

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