Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 7.3e-188 660.6 382 100.0
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 8.6e-173 610.5 382 89.8
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 7.6e-169 597.4 385 85.5
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 4.5e-153 545.0 385 70.9
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 7.1e-151 537.7 407 68.3
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 5.3e-146 521.5 391 70.8
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.1e-143 513.8 388 70.1
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.6e-142 510.0 386 65.5
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 1.0e-141 507.3 394 65.7
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 1.0e-141 507.3 394 63.2
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.9e-140 503.1 391 67.3
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 7.4e-140 501.1 388 66.8
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 1.3e-139 500.4 380 64.5
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.3e-139 500.4 386 64.2
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.3e-138 495.0 388 63.7
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 4.5e-137 491.9 386 64.0
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 1.7e-136 490.0 390 62.1
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 2.2e-136 489.6 388 63.1
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 2.2e-136 489.6 388 63.1
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 3.8e-136 488.8 386 69.7
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 3.8e-136 488.8 387 73.1
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 5.0e-136 488.4 386 63.5
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.4e-135 486.9 387 66.4
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.9e-135 486.5 387 69.8
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.2e-134 483.8 396 61.9
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 2.1e-134 483.0 386 61.4
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 2.1e-134 483.0 390 61.3
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 4.6e-134 481.9 384 63.5
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 7.9e-134 481.1 387 72.4
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 7.9e-134 481.1 390 63.1
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.3e-133 480.3 388 61.9
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 1.3e-133 480.3 393 62.3
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 3.0e-133 479.2 369 68.0
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 8.7e-133 477.6 393 61.6
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.5e-132 476.9 387 61.5
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 2.5e-132 476.1 387 72.6
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.5e-132 476.1 390 62.3
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 5.7e-132 474.9 392 61.7
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 4.8e-131 471.9 369 65.0
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.1e-130 470.7 419 58.5
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.1e-130 470.7 394 61.9
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 2.4e-130 469.5 384 62.5
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 6.9e-130 468.0 394 60.7
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 6.9e-130 468.0 384 62.0
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 6.9e-130 468.0 384 62.0
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.5e-129 466.8 395 59.7
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.4e-129 465.7 392 60.7
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 3.4e-129 465.7 389 63.2
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 5.9e-129 464.9 396 64.9
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.4e-127 460.3 389 61.4
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 1.9e-127 459.9 443 54.6
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 2.5e-127 459.5 369 60.2
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 5.5e-127 458.4 391 59.6
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 7.2e-127 458.0 397 58.2
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 1.6e-126 456.8 391 57.5
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 2.7e-126 456.1 372 64.8
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.7e-126 456.1 386 60.1
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 4.6e-126 455.3 396 59.3
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 7.9e-126 454.5 373 68.4
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.4e-125 453.8 399 61.9
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.4e-125 453.8 391 58.8
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.8e-125 453.4 396 64.9
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 3.0e-125 452.6 395 60.0
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.0e-125 452.6 391 59.3
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 2.5e-124 449.5 374 65.5
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 3.3e-124 449.1 394 59.4
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 5.7e-124 448.4 390 59.0
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 7.4e-124 448.0 368 66.3
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 6.3e-123 444.9 369 62.3
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 6.3e-123 444.9 390 58.2
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 8.2e-123 444.5 392 61.7
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.4e-122 443.7 390 57.9
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 2.4e-122 443.0 341 65.1
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 1.5e-121 440.3 400 59.8
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 2.0e-121 439.9 368 57.6
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 2.9e-120 436.0 389 57.3
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 1.2e-118 430.6 394 54.8
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 2.7e-118 429.5 383 63.7
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 1.4e-117 427.2 381 59.1
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.4e-117 427.2 389 55.5
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 5.1e-117 425.2 388 55.2
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 2.0e-116 423.3 337 62.6
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 9.7e-116 421.0 387 55.3
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 4.8e-115 418.7 422 52.4
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 2.6e-113 412.9 388 58.5
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 2.6e-113 412.9 385 59.0
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 2.6e-113 412.9 391 55.2
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 4.5e-113 412.1 408 55.6
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 4.5e-113 412.1 385 59.2
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.0e-112 411.0 369 58.3
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 2.9e-112 409.5 427 52.7
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 8.5e-112 407.9 386 58.8
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 8.5e-112 407.9 318 62.9
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.5e-111 407.1 382 54.5
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 3.6e-110 402.5 384 54.7
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 5.7e-108 395.2 391 52.7
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 8.2e-107 391.3 344 57.0
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.4e-106 389.8 388 53.9
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 1.7e-104 383.6 423 51.8
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.5e-103 380.6 399 51.1
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 3.6e-102 375.9 340 60.9
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.5e-100 370.5 395 51.9
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.7e-96 357.1 389 48.8
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 6.5e-96 355.1 384 48.7
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 3.2e-95 352.8 381 49.9
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.1e-90 337.8 303 56.8
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 8.9e-85 318.2 262 66.8
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.7e-80 303.9 293 58.4
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 2.9e-80 303.1 200 73.5
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.2e-75 287.0 379 46.7
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 8.3e-75 285.0 380 47.9
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 1.5e-68 264.2 232 59.9
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 9.8e-68 261.5 383 38.9
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 4.1e-66 256.1 348 45.7
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 7.6e-60 235.3 211 57.3
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 7.6e-60 235.3 229 55.5
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 8.4e-59 231.9 315 43.5
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.1e-55 221.5 152 63.8
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.8e-53 214.2 298 38.6
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 2.1e-41 174.1 234 40.6
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 3.0e-40 170.2 113 73.5
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.5e-39 167.9 128 66.4
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 5.6e-39 166.0 121 65.3
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 7.4e-39 165.6 189 63.5
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 9.6e-39 165.2 355 32.4
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 6.2e-38 162.5 205 41.5
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 1.8e-21 107.8 327 26.6
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.7e-17 94.0 342 26.3
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 8.2e-14 82.4 137 36.5
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.4e-13 81.6 59 69.5
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.2e-11 74.3 90 42.2
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 6.1e-09 66.2 78 50.0
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-08 64.3 58 44.8
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.5e-07 61.6 105 35.2


User provided reference genes

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