Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 4.4e-45 184.5 110 100.0
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 9.8e-37 156.8 101 81.2
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 8.6e-33 143.7 101 73.3
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 6.2e-31 137.5 104 66.3
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.0e-30 134.8 98 70.4
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.5e-29 132.9 102 69.6
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.5e-29 132.9 101 66.3
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-29 132.9 101 66.3
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-29 132.9 101 66.3
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 3.4e-29 131.7 98 67.3
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 3.4e-29 131.7 98 67.3
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 3.4e-29 131.7 98 69.4
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 3.4e-29 131.7 98 69.4
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 3.4e-29 131.7 100 69.0
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.4e-29 131.3 101 65.3
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 7.5e-29 130.6 97 68.0
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 7.5e-29 130.6 98 69.4
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 7.5e-29 130.6 98 69.4
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.3e-28 129.8 97 68.0
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.7e-28 129.4 101 66.3
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.2e-28 129.0 95 68.4
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 3.7e-28 128.3 97 66.0
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 6.4e-28 127.5 98 65.3
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 8.3e-28 127.1 102 64.7
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.1e-27 126.7 98 66.3
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 1.1e-27 126.7 101 65.3
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.4e-27 126.3 103 63.1
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.4e-27 126.3 95 68.4
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 1.9e-27 125.9 98 64.3
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.9e-27 125.9 94 68.1
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 1.9e-27 125.9 97 64.9
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 2.4e-27 125.6 97 64.9
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 2.4e-27 125.6 96 65.6
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.4e-27 125.6 98 66.3
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 3.2e-27 125.2 97 63.9
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 5.4e-27 124.4 98 64.3
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 5.4e-27 124.4 104 61.5
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 9.2e-27 123.6 97 64.9
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 9.2e-27 123.6 101 63.4
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 9.2e-27 123.6 101 63.4
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 9.2e-27 123.6 101 63.4
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 9.2e-27 123.6 101 63.4
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 9.2e-27 123.6 98 63.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 9.2e-27 123.6 98 64.3
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.2e-26 123.2 97 63.9
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.2e-26 123.2 96 65.6
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.2e-26 123.2 97 63.9
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.1e-26 122.5 95 66.3
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.7e-26 122.1 97 63.9
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.7e-26 122.1 97 62.9
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 2.7e-26 122.1 101 59.4
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 3.5e-26 121.7 97 61.9
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 3.5e-26 121.7 97 62.9
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 4.6e-26 121.3 101 62.4
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 4.6e-26 121.3 98 63.3
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 4.6e-26 121.3 100 61.0
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 6.0e-26 120.9 96 62.5
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 7.8e-26 120.6 98 62.2
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 7.8e-26 120.6 99 64.6
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.0e-25 120.2 98 62.2
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 1.3e-25 119.8 96 62.5
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 1.3e-25 119.8 97 64.9
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.3e-25 119.8 98 60.2
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 1.3e-25 119.8 98 60.2
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.7e-25 119.4 98 59.2
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 1.7e-25 119.4 98 62.2
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.7e-25 119.4 98 61.2
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 3.0e-25 118.6 96 60.4
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.0e-25 118.6 101 62.4
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 3.0e-25 118.6 100 62.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.9e-25 118.2 98 59.2
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 3.9e-25 118.2 98 60.2
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 6.6e-25 117.5 98 61.2
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 8.6e-25 117.1 95 63.2
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.1e-24 116.7 100 59.0
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.5e-24 116.3 99 61.6
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.9e-24 115.9 95 65.3
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.9e-24 115.9 99 61.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.9e-24 115.9 96 61.5
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 3.3e-24 115.2 99 60.6
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.3e-24 115.2 95 64.2
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 3.3e-24 115.2 99 59.6
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 4.3e-24 114.8 99 59.6
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 7.3e-24 114.0 99 59.6
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.6e-23 112.8 99 58.6
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 2.1e-23 112.5 113 55.8
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 8.1e-23 110.5 101 57.4
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 8.1e-23 110.5 101 57.4
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 1.8e-22 109.4 96 56.2
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 2.4e-22 109.0 96 56.2
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 2.4e-22 109.0 96 56.2
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 2.4e-22 109.0 96 56.2
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 3.1e-22 108.6 96 56.2
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 3.1e-22 108.6 96 56.2
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 3.1e-22 108.6 96 56.2
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 6.8e-22 107.5 99 57.6
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 4.4e-21 104.8 101 53.5
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 4.4e-21 104.8 101 53.5
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 2.2e-20 102.4 97 53.6
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 7.1e-19 97.4 80 65.0
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.6e-18 96.3 80 65.0
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.6e-18 96.3 78 66.7
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 3.5e-18 95.1 152 40.8
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 2.3e-17 92.4 84 60.7
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.9e-17 91.7 79 59.5
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 3.9e-17 91.7 78 62.8
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 6.6e-17 90.9 79 59.5
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.5e-16 89.7 77 61.0
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 2.5e-16 89.0 101 47.5
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 4.3e-16 88.2 102 49.0
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 7.3e-16 87.4 93 46.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.6e-15 86.3 78 60.3
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 2.1e-15 85.9 106 44.3
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 2.8e-15 85.5 78 59.0
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.4e-14 83.2 76 60.5
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 1.4e-14 83.2 79 58.2
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 2.4e-14 82.4 74 56.8
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.5e-13 79.7 74 56.8
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 2.6e-13 79.0 94 45.7
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 2.2e-12 75.9 92 43.5
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.1e-11 73.6 76 50.0
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 4.3e-08 61.6 78 41.0
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 4.3e-08 61.6 78 41.0
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.8e-06 56.2 54 55.6


User provided reference genes

Program Settings