Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 2.9e-157 558.5 281 100.0
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.2e-144 516.5 281 92.9
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.7e-115 419.1 267 82.0
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 7.9e-99 364.4 249 79.5
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 3.2e-84 315.8 277 66.1
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 9.4e-84 314.3 278 66.5
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 1.2e-83 313.9 285 67.4
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 2.7e-83 312.8 278 66.2
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.8e-82 310.1 287 65.9
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.5e-81 307.0 291 64.9
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 1.3e-80 303.9 286 66.4
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 2.2e-80 303.1 282 65.2
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 3.7e-80 302.4 281 66.5
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 5.9e-78 295.0 285 64.6
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.0e-77 294.3 287 61.7
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.0e-77 294.3 298 62.8
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.1e-76 290.8 286 63.3
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.5e-76 290.4 293 62.5
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.5e-76 290.4 285 62.8
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.5e-76 289.7 283 63.3
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 2.5e-76 289.7 283 62.9
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.1e-75 286.6 286 63.6
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 2.2e-72 276.6 279 62.4
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 3.7e-72 275.8 283 62.2
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 3.7e-72 275.8 295 59.3
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 7.0e-71 271.6 276 61.6
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 1.6e-70 270.4 294 58.8
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 1.6e-70 270.4 266 59.0
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 3.5e-70 269.2 286 60.5
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.5e-70 268.9 280 60.4
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 5.9e-70 268.5 311 56.6
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 5.9e-70 268.5 290 59.3
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.9e-69 266.2 292 59.6
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 4.2e-68 262.3 289 57.8
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 4.2e-68 262.3 292 59.2
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 5.5e-68 261.9 280 59.3
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.2e-67 260.8 280 58.9
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.2e-67 260.8 289 59.5
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 8.0e-67 258.1 281 58.0
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 8.0e-67 258.1 289 56.7
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 2.3e-66 256.5 280 57.9
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 4.0e-66 255.8 283 56.9
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 5.2e-66 255.4 283 58.7
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 2.0e-65 253.4 302 57.9
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.0e-65 253.4 268 57.5
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 6.3e-64 248.4 281 57.3
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.4e-63 246.5 277 57.4
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 4.1e-63 245.7 293 53.2
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 5.4e-63 245.4 286 55.2
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 5.9e-62 241.9 280 56.4
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.0e-61 241.1 280 55.7
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 1.1e-60 237.7 270 55.9
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.5e-60 237.3 303 54.1
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 1.9e-60 236.9 294 55.1
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.9e-60 236.9 286 54.5
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 3.3e-60 236.1 271 56.5
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 4.3e-60 235.7 275 57.5
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 5.6e-60 235.3 285 54.7
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.2e-59 234.2 281 54.1
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.1e-59 233.4 281 55.5
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.8e-59 233.0 268 56.0
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 6.8e-58 228.4 249 58.6
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 1.5e-57 227.3 270 55.2
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 2.6e-57 226.5 269 53.9
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 2.6e-57 226.5 273 54.2
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 2.6e-57 226.5 273 54.2
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 5.7e-57 225.3 274 54.4
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 9.8e-57 224.6 273 53.8
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 8.3e-56 221.5 285 53.3
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 1.1e-55 221.1 296 50.3
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 2.4e-55 219.9 285 51.9
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 2.4e-55 219.9 278 51.8
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 2.4e-55 219.9 278 51.4
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.2e-55 219.5 266 52.6
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 9.2e-55 218.0 275 53.1
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 1.2e-54 217.6 278 51.1
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 3.5e-54 216.1 293 51.2
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 4.6e-54 215.7 281 52.7
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 8.6e-53 211.5 255 56.1
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.9e-52 210.3 274 55.1
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 2.5e-52 209.9 194 62.4
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 7.3e-52 208.4 281 54.8
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 1.6e-51 207.2 285 49.8
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 8.0e-51 204.9 266 50.8
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 8.0e-51 204.9 278 52.2
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 3.1e-50 203.0 270 51.5
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 6.8e-50 201.8 254 53.1
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 4.4e-49 199.1 181 65.2
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 2.2e-48 196.8 289 50.2
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.7e-48 196.1 279 48.7
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 3.0e-45 186.4 227 53.7
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 1.1e-44 184.5 250 52.0
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 3.6e-43 179.5 248 51.2
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.6e-43 179.5 227 55.1
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 1.4e-42 177.6 275 44.7
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 3.1e-42 176.4 260 50.8
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 1.2e-41 174.5 254 53.1
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 1.1e-39 167.9 282 45.0
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 5.4e-39 165.6 173 59.0
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 2.1e-38 163.7 246 48.0
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 2.1e-38 163.7 182 59.9
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 5.6e-36 155.6 343 37.6
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 7.3e-36 155.2 233 51.1
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.1e-30 137.1 228 45.2
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 1.3e-29 134.4 146 61.6
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.7e-29 134.0 242 43.4
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 1.5e-25 120.9 177 47.5
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.9e-23 114.0 271 38.7
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 2.4e-23 113.6 176 46.0
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 5.4e-23 112.5 91 63.7
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.2e-22 111.3 111 62.2
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 1.9e-15 87.4 81 58.0
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 7.1e-15 85.5 73 60.3
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 1.1e-12 78.2 229 36.7
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 1.9e-12 77.4 107 44.9
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 1.8e-10 70.9 70 50.0
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 4.0e-10 69.7 70 48.6
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 4.0e-10 69.7 70 48.6
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 2.0e-09 67.4 78 46.2
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 3.4e-09 66.6 42 71.4
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 3.4e-09 66.6 54 57.4
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 3.4e-09 66.6 38 73.7
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 3.4e-09 66.6 54 57.4
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 9.9e-09 65.1 54 55.6
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 1.3e-08 64.7 38 71.1
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 1.7e-08 64.3 38 71.1
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 3.8e-08 63.2 38 71.1
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 1.1e-07 61.6 54 53.7
Haze_04933 Corylus avellana HOM05D002674 ORTHO05D007700 7.1e-07 58.9 35 82.9


User provided reference genes

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