Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0085500 Salix brachista HOM05D004068 ORTHO05D004700 1.4e-142 509.6 257 100.0
Potri.014G115400 Populus trichocarpa HOM05D004068 ORTHO05D004700 3.0e-92 342.4 253 73.9
Potri.002G190300 Populus trichocarpa HOM05D004068 ORTHO05D004700 8.3e-87 324.3 260 69.6
Sabra02G0165200 Salix brachista HOM05D004068 ORTHO05D004700 2.1e-66 256.5 277 54.9
Manes.05G011200 Manihot esculenta HOM05D004068 ORTHO05D004700 6.0e-61 238.4 253 55.7
TWI14G0788 Tripterygium wilfordii HOM05D004068 ORTHO05D004700 3.9e-60 235.7 249 53.8
CANSAT54G1466 Cannabis sativa HOM05D004068 ORTHO05D004700 2.1e-58 229.9 256 50.8
Duzib138G0863 Durio zibethinus HOM05D004068 ORTHO05D004700 3.6e-58 229.2 252 52.4
Gorai.007G119900 Gossypium raimondii HOM05D004068 ORTHO05D004700 1.1e-57 227.6 225 54.7
Nitab4.5_0004218g0050 Nicotiana tabacum HOM05D004068 ORTHO05D004700 1.8e-57 226.9 187 61.0
Medtr1g086340 Medicago truncatula HOM05D004068 ORTHO05D004700 2.4e-57 226.5 252 50.8
MD09G1287000 Malus domestica HOM05D004068 ORTHO05D004700 3.1e-57 226.1 197 58.4
Prupe.3G006200 Prunus persica HOM05D004068 ORTHO05D004700 3.1e-57 226.1 209 57.4
Nn3g21863 Nelumbo nucifera HOM05D004068 ORTHO05D004700 6.9e-57 224.9 248 51.2
RcHm_v2.0_Chr3g0486891 Rosa chinensis HOM05D004068 ORTHO05D004700 6.9e-57 224.9 253 49.8
COL.COLO4_23168 Corchorus olitorius HOM05D004068 ORTHO05D004700 9.0e-57 224.6 249 51.8
Eucgr.H00894 Eucalyptus grandis HOM05D004068 ORTHO05D004700 1.5e-56 223.8 260 49.2
Thecc.01G321500 Theobroma cacao HOM05D004068 ORTHO05D004700 1.5e-56 223.8 253 50.2
Peaxi162Scf00919g00026 Petunia axillaris HOM05D004068 ORTHO05D004700 2.0e-56 223.4 255 48.2
GSVIVG01028194001 Vitis vinifera HOM05D004068 ORTHO05D004700 7.6e-56 221.5 254 48.8
CAN.G100.22 Capsicum annuum HOM05D004068 ORTHO05D004700 9.9e-56 221.1 256 49.2
Cfa004871 Carpinus fangiana HOM05D004068 ORTHO05D004700 9.9e-56 221.1 253 50.2
Ciclev10022090m.g Citrus clementina HOM05D004068 ORTHO05D004700 9.9e-56 221.1 257 49.0
AL1G11820 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 2.2e-55 219.9 210 55.2
Glyma.10G009700 Glycine max HOM05D004068 ORTHO05D004700 3.8e-55 219.2 254 48.8
THA.LOC104801318 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 3.8e-55 219.2 180 62.8
Actinidia21362 Actinidia chinensis HOM05D004068 ORTHO05D004700 6.4e-55 218.4 246 50.0
Nitab4.5_0000222g0260 Nicotiana tabacum HOM05D004068 ORTHO05D004700 6.4e-55 218.4 182 61.0
C05p01270 Brassica napus HOM05D004068 ORTHO05D004700 8.4e-55 218.0 177 62.1
AT1G02475 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 1.1e-54 217.6 199 56.3
FAN23G3049 Fragaria x ananassa HOM05D004068 ORTHO05D004700 1.1e-54 217.6 253 49.0
PSO357G0073 Papaver somniferum HOM05D004068 ORTHO05D004700 1.1e-54 217.6 204 54.9
PGR083G2849 Punica granatum HOM05D004068 ORTHO05D004700 1.1e-54 217.6 250 51.2
A10p01270 Brassica napus HOM05D004068 ORTHO05D004700 1.4e-54 217.2 255 52.2
Carub.0001s0155 Capsella rubella HOM05D004068 ORTHO05D004700 1.4e-54 217.2 205 55.1
CARHR001800 Cardamine hirsuta HOM05D004068 ORTHO05D004700 1.4e-54 217.2 237 52.7
MSTRG.18070 Avicennia marina HOM05D004068 ORTHO05D004700 1.9e-54 216.9 256 50.4
Actinidia06383 Actinidia chinensis HOM05D004068 ORTHO05D004700 3.2e-54 216.1 211 54.0
FAN28G2449 Fragaria x ananassa HOM05D004068 ORTHO05D004700 5.4e-54 215.3 266 47.7
Migut.D00035 Erythranthe guttata HOM05D004068 ORTHO05D004700 7.1e-54 214.9 193 57.0
PSO170G5617 Papaver somniferum HOM05D004068 ORTHO05D004700 1.2e-53 214.2 204 53.9
Sp1g01550 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.2e-53 214.2 177 60.5
Glyma.02G009000 Glycine max HOM05D004068 ORTHO05D004700 2.1e-53 213.4 217 52.1
HanXRQChr16g0512461 Helianthus annuus HOM05D004068 ORTHO05D004700 2.7e-53 213.0 193 58.0
Sed0027961 Sechium edule HOM05D004068 ORTHO05D004700 2.7e-53 213.0 249 51.0
Thhalv10008722m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 7.9e-53 211.5 253 50.6
Solyc01g068030.3 Solanum lycopersicum HOM05D004068 ORTHO05D004700 7.9e-53 211.5 256 47.7
SalBow6G1478 Salvia bowleyana HOM05D004068 ORTHO05D004700 1.0e-52 211.1 260 50.0
CSS0008406 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 1.3e-52 210.7 187 57.2
MELO3C023625.2 Cucumis melo HOM05D004068 ORTHO05D004700 2.3e-52 209.9 257 49.8
CiPaw.07G122600 Carya illinoinensis HOM05D004068 ORTHO05D004700 3.0e-52 209.5 198 52.5
Gohir.A07G130200 Gossypium hirsutum HOM05D004068 ORTHO05D004700 3.0e-52 209.5 245 48.6
Gorai.001G146300 Gossypium raimondii HOM05D004068 ORTHO05D004700 3.0e-52 209.5 245 48.2
Rhsim13G0001400 Rhododendron simsii HOM05D004068 ORTHO05D004700 3.9e-52 209.1 258 48.8
PGSC0003DMG400005200 Solanum tuberosum HOM05D004068 ORTHO05D004700 5.1e-52 208.8 256 47.3
Gohir.D07G134600 Gossypium hirsutum HOM05D004068 ORTHO05D004700 8.7e-52 208.0 245 47.8
Gohir.D11G111800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 8.7e-52 208.0 177 59.9
Sed0019105 Sechium edule HOM05D004068 ORTHO05D004700 1.5e-51 207.2 252 48.8
CsaV3_7G030310 Cucumis sativus L. HOM05D004068 ORTHO05D004700 1.9e-51 206.8 251 48.2
Lalb_Chr06g0167051 Lupinus albus HOM05D004068 ORTHO05D004700 1.9e-51 206.8 253 47.4
Sopen01g029940 Solanum pennellii HOM05D004068 ORTHO05D004700 1.9e-51 206.8 258 46.5
Sopen01g029950 Solanum pennellii HOM05D004068 ORTHO05D004700 1.9e-51 206.8 250 48.4
FAN26G1054 Fragaria x ananassa HOM05D004068 ORTHO05D004700 2.5e-51 206.5 295 43.1
Solyc01g068020.4 Solanum lycopersicum HOM05D004068 ORTHO05D004700 9.6e-51 204.5 265 47.2
TAR633G0425 Trochodendron aralioides HOM05D004068 ORTHO05D004700 1.3e-50 204.1 223 51.1
Cc01_g21940 Coffea canephora HOM05D004068 ORTHO05D004700 4.8e-50 202.2 179 57.0
FAN19G0978 Fragaria x ananassa HOM05D004068 ORTHO05D004700 8.1e-50 201.4 258 45.3
PGR083G1259 Punica granatum HOM05D004068 ORTHO05D004700 8.1e-50 201.4 250 47.2
SGA_v2.0_scaffold417G51268 Striga asiatica HOM05D004068 ORTHO05D004700 3.1e-49 199.5 258 46.1
ECA236G4612 Erigeron canadensis HOM05D004068 ORTHO05D004700 5.3e-49 198.7 247 45.7
EL10As5g23587 Beta vulgaris HOM05D004068 ORTHO05D004700 9.0e-49 198.0 262 44.7
BraA10t42405Z Brassica rapa HOM05D004068 ORTHO05D004700 9.0e-49 198.0 240 50.4
unitig_90.g27445 Utricularia gibba HOM05D004068 ORTHO05D004700 1.5e-48 197.2 179 55.3
Aa31LG1G10110 Aethionema arabicum HOM05D004068 ORTHO05D004700 2.6e-48 196.4 245 46.5
Carub.0006s3535 Capsella rubella HOM05D004068 ORTHO05D004700 4.5e-48 195.7 185 56.2
Atru.chr5.916 Acer truncatum HOM05D004068 ORTHO05D004700 5.8e-48 195.3 229 47.2
BcaB03g15774 Brassica carinata HOM05D004068 ORTHO05D004700 5.8e-48 195.3 169 58.0
HanXRQChr06g0168031 Helianthus annuus HOM05D004068 ORTHO05D004700 1.3e-47 194.1 194 52.1
Sp6g01730 Schrenkiella parvula HOM05D004068 ORTHO05D004700 2.9e-47 193.0 259 44.4
FvH4_1g26710 Fragaria vesca HOM05D004068 ORTHO05D004700 8.4e-47 191.4 191 51.3
AL6G51410 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 1.1e-46 191.0 224 47.8
Hma1.2p1_0484F.1_g162840 Hydrangea macrophylla HOM05D004068 ORTHO05D004700 1.4e-46 190.7 184 54.3
Zm00001eb131060 Zea mays HOM05D004068 ORTHO05D004700 1.4e-46 190.7 181 53.0
Thhalv10028926m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 2.4e-46 189.9 178 55.1
Thhalv10028927m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 2.4e-46 189.9 178 55.1
BcaB01g02105 Brassica carinata HOM05D004068 ORTHO05D004700 3.2e-46 189.5 252 46.4
AT4G01883 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 4.2e-46 189.1 252 44.4
CiPaw.08G084800 Carya illinoinensis HOM05D004068 ORTHO05D004700 7.1e-46 188.3 138 63.8
MBI19_g32706_MAGBIO Magnolia biondii HOM05D004068 ORTHO05D004700 1.2e-45 187.6 247 45.3
Lsat_1_v5_gn_8_167400 Lactuca sativa HOM05D004068 ORTHO05D004700 1.6e-45 187.2 171 56.1
HPP92_010032 Vanilla planifolia HOM05D004068 ORTHO05D004700 1.6e-45 187.2 197 48.2
TAR636G1362 Trochodendron aralioides HOM05D004068 ORTHO05D004700 2.1e-45 186.8 236 47.0
BolC9t53073H Brassica oleracea HOM05D004068 ORTHO05D004700 4.6e-45 185.7 246 44.7
Cpa.g.sc67.88 Carica papaya HOM05D004068 ORTHO05D004700 4.6e-45 185.7 191 53.4
AUR62024574 Chenopodium quinoa HOM05D004068 ORTHO05D004700 4.6e-45 185.7 258 44.2
QL12p034273 Quercus lobata HOM05D004068 ORTHO05D004700 1.0e-44 184.5 241 45.6
THA.LOC104801319 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 1.0e-44 184.5 261 45.6
Aqoxy2G02578 Aquilegia oxysepala HOM05D004068 ORTHO05D004700 1.3e-44 184.1 174 52.3
Haze_05111 Corylus avellana HOM05D004068 ORTHO05D004700 2.3e-44 183.3 232 47.8
Gohir.A11G106800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 3.0e-44 183.0 158 60.1
C09p01400 Brassica napus HOM05D004068 ORTHO05D004700 6.7e-44 181.8 246 43.9
BcaC04g24068 Brassica carinata HOM05D004068 ORTHO05D004700 1.1e-43 181.0 246 44.3
MD17G1279300 Malus domestica HOM05D004068 ORTHO05D004700 1.9e-43 180.3 136 63.2
CAN.G100.23 Capsicum annuum HOM05D004068 ORTHO05D004700 3.3e-43 179.5 170 52.9
Duzib211G0484 Durio zibethinus HOM05D004068 ORTHO05D004700 4.8e-42 175.6 187 50.8
BolC5t28909H Brassica oleracea HOM05D004068 ORTHO05D004700 1.4e-41 174.1 239 46.0
Lj1A11T70 Lonicera japonica HOM05D004068 ORTHO05D004700 1.4e-41 174.1 255 43.5
VMungo0720G2238 Vigna mungo HOM05D004068 ORTHO05D004700 6.9e-41 171.8 195 48.2
AUR62011741 Chenopodium quinoa HOM05D004068 ORTHO05D004700 2.6e-40 169.9 294 40.1
SEGI_19128 Sequoiadendron giganteum HOM05D004068 ORTHO05D004700 2.6e-40 169.9 178 47.8
BcaC07g42396 Brassica carinata HOM05D004068 ORTHO05D004700 3.4e-40 169.5 170 52.9
Hund09678 Selenicereus undatus HOM05D004068 ORTHO05D004700 3.4e-40 169.5 163 54.0
AL1G11810 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 6.5e-39 165.2 191 45.0
Sc17g0000200 Simmondsia chinensis HOM05D004068 ORTHO05D004700 2.5e-38 163.3 149 53.7
AT1G02470 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 5.5e-38 162.2 184 44.6
CDE02G2955 Ceratophyllum demersum HOM05D000037 ORTHO05D001684 7.1e-38 161.8 199 47.2
Carub.0001s0154 Capsella rubella HOM05D004068 ORTHO05D004700 1.2e-37 161.0 261 37.2
DCAR_018255 Daucus carota HOM05D004068 ORTHO05D004700 4.6e-37 159.1 142 59.9
CARHR001790 Cardamine hirsuta HOM05D004068 ORTHO05D004700 2.3e-36 156.8 230 38.7
AagrBONN_evm.TU.Sc2ySwM_228.3301 Anthoceros agrestis HOM05D004068 ORTHO05D004700 8.7e-36 154.8 174 47.7
THA.LOC104801317 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 1.1e-35 154.5 224 40.6
Mapoly0066s0015 Marchantia polymorpha HOM05D004068 ORTHO05D004700 2.5e-35 153.3 174 43.1
Pp3c26_7940 Physcomitrium patens HOM05D004068 ORTHO05D004700 7.4e-35 151.8 175 42.3
Sp1g01540 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.3e-34 151.0 177 41.8
ATR0693G403 Amborella trichopoda HOM05D004068 ORTHO05D004700 2.8e-34 149.8 166 47.0
CSS0047755 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 3.7e-34 149.4 121 58.7
Thhalv10008621m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 3.7e-34 149.4 177 41.2
CARHR249850 Cardamine hirsuta HOM05D004068 ORTHO05D004700 6.3e-34 148.7 185 47.0
BcaC07g42395 Brassica carinata HOM05D004068 ORTHO05D004700 1.8e-33 147.1 177 41.2
BolC8t52840H Brassica oleracea HOM05D004068 ORTHO05D004700 1.8e-33 147.1 177 41.2
CSS0031477 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 4.1e-33 146.0 121 57.0
Phvul.007G211200 Phaseolus vulgaris HOM05D004068 ORTHO05D004700 6.9e-33 145.2 147 55.1
Psat6g159440 Pisum sativum HOM05D004068 ORTHO05D004700 6.9e-33 145.2 145 55.2
Aa31LG1G10100 Aethionema arabicum HOM05D004068 ORTHO05D004700 2.0e-32 143.7 237 36.7
A09p68650 Brassica napus HOM05D004068 ORTHO05D004700 2.6e-32 143.3 177 40.1
BraA09t42208Z Brassica rapa HOM05D004068 ORTHO05D004700 2.6e-32 143.3 177 40.1
A10p01260 Brassica napus HOM05D004068 ORTHO05D004700 1.0e-31 141.4 177 37.9
BraA10t42404Z Brassica rapa HOM05D004068 ORTHO05D004700 1.0e-31 141.4 177 37.9
C05p01260 Brassica napus HOM05D004068 ORTHO05D004700 2.2e-31 140.2 177 37.9
SMO134G0067 Selaginella moellendorffii HOM05D004068 ORTHO05D004700 2.9e-31 139.8 168 42.3
Lj5g0018153 Lotus japonicus HOM05D004068 ORTHO05D004700 8.5e-31 138.3 91 70.3
ClCG09G004770 Citrullus lanatus HOM05D004068 ORTHO05D004700 7.2e-30 135.2 269 37.5
Pp3c9_13510 Physcomitrium patens HOM05D004068 ORTHO05D004700 1.6e-29 134.0 175 38.9
arahy.Tifrunner.gnm1.ann1.20WW32 Arachis hypogaea HOM05D004068 ORTHO05D004700 1.3e-28 131.0 87 71.3
arahy.Tifrunner.gnm1.ann1.G5UTBZ Arachis hypogaea HOM05D004068 ORTHO05D004700 2.3e-28 130.2 128 55.5
Ca_10252_v3 Cicer arietinum L. HOM05D004068 ORTHO05D004700 2.3e-28 130.2 139 51.8
HPP92_015252 Vanilla planifolia HOM05D004068 ORTHO05D004700 8.7e-28 128.3 142 47.2
TPR.G3089 Trifolium pratense HOM05D004068 ORTHO05D004700 8.2e-26 121.7 168 45.2
Ah.02g112620 Amaranthus hybridus HOM05D004068 ORTHO05D004700 1.4e-25 120.9 173 43.4
BraA09t35801Z Brassica rapa HOM05D004068 ORTHO05D004700 2.4e-25 120.2 153 45.8
C08p53250 Brassica napus HOM05D004068 ORTHO05D004700 3.1e-25 119.8 153 39.2
CBR_g29411 Chara braunii HOM05D004068 ORTHO05D004700 1.3e-23 114.4 158 41.1
Dinv12104 Davidia involucrata HOM05D004068 ORTHO05D004700 6.5e-23 112.1 85 62.4
vmacro09333 Vaccinium macrocarpon HOM05D004068 ORTHO05D004700 1.9e-22 110.5 65 72.3
Cre14.g616250 Chlamydomonas reinhardtii HOM05D004068 ORTHO05D004700 1.4e-20 104.4 186 33.3
CAN.G257.121 Capsicum annuum HOM05D004068 ORTHO05D004700 3.9e-20 102.8 90 58.9
MCO03G258 Micromonas commoda HOM05D004068 ORTHO05D004700 3.3e-19 99.8 173 31.2
Aa31LG5G1470 Aethionema arabicum HOM05D004068 ORTHO05D004700 4.8e-18 95.9 185 34.6
PRCOL_00002997 Prasinoderma coloniale HOM05D004068 ORTHO05D004700 3.1e-17 93.2 171 32.7
Glyma.19G225300 Glycine max HOM05D004068 ORTHO05D004700 1.5e-16 90.9 86 54.7
Oeu052569.2 Olea europaea HOM05D004068 ORTHO05D004700 1.1e-14 84.7 120 49.2
Oeu044746.1 Olea europaea HOM05D004068 ORTHO05D004700 7.9e-13 78.6 89 53.9
Os01g0328600 Oryza sativa ssp. japonica HOM05D004068 ORTHO05D004700 9.7e-11 71.6 46 60.9
A09p01340 Brassica napus HOM05D004068 ORTHO05D004700 1.3e-10 71.2 120 40.0
BcaC03g18203 Brassica carinata HOM05D004068 ORTHO05D004700 2.2e-10 70.5 113 39.8
A02p42700 Brassica napus HOM05D004068 ORTHO05D004700 1.4e-09 67.8 109 37.6
C02p62690 Brassica napus HOM05D004068 ORTHO05D004700 1.4e-09 67.8 110 38.2
TPR.G3034 Trifolium pratense HOM05D004068 ORTHO05D004700 1.5e-06 57.8 42 61.9


User provided reference genes

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